Clone LD37956 Report

Search the DGRC for LD37956

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:379
Well:56
Vector:pOT2
Associated Gene/TranscriptActn-RA
Protein status:LD37956.pep: gold
Preliminary Size:3538
Sequenced Size:3444

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4376 2001-01-01 Release 2 assignment
CG4380 2001-01-01 Release 2 assignment
CG4376 2001-11-29 Blastp of sequenced clone
CG4376 2003-01-01 Sim4 clustering to Release 3
Actn 2008-04-29 Release 5.5 accounting
Actn 2008-08-15 Release 5.9 accounting
Actn 2008-12-18 5.12 accounting

Clone Sequence Records

LD37956.complete Sequence

3444 bp (3444 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069615

> LD37956.complete
CTCAATTACTACAATTACAATAGAGATTGCAACAAATTAAATCAGCGTCG
TGTGGTGTTGTCGTGTCAGTGACGTGCCTGTGTGTGTGTGTGCTCGCGAG
CACTGATAACTGATAGCCAAGGAAAAAAGTAAATAAACAACCGTCACCTT
GCGGCGCATCAAAAGCCACTGGCTGCAACAGCAGCAACTGGATCACCAAC
AACAACAACAGCACCACCAGCAGCAGTGAGAGCGAGCGAGAGAGTGTGCA
GCGGGACAGGGAACGAGATAGATATATAACGATCGAGCGGAACATCTGAC
AGCGCCACAAGATGATGATGGAGAACGGACTCTCCATGGAGTACGGAGAT
GGCTACATGGAGCAGGAGGAGGAGTGGGAGCGCGAGGGCCTGCTCGATCC
TGCGTGGGAGAAGCAACAGAAGAAGACATTTACCGCCTGGTGTAACAGCC
ATTTGCGCAAGGCCGGTACAGCCATCGACAACATCGAGGAGGACTTCCGC
AACGGCCTCAAGCTGATGCTGCTGCTGGAGGTGATCTCCGGCGAGACGCT
CCCCAAGCCCGATCGCGGCAAGATGCGCTTCCACAAGATCGCCAACGTGA
ACAAGGCTCTCGACTTCATCGCCTCCAAGGGCGTCCACCTGGTCTCTATC
GGCGCCGAGGAGATCGTCGATGGAAACTTGAAGATGACTCTGGGTATGAT
CTGGACGATTATCCTGCGCTTCGCCATTCAGGACATCTCCGTGGAGGAGA
TGACCGCCAAGGAGGGTCTGCTGCTGTGGTGCCAGCGCAAGACGGCTCCC
TACAAGAACGTCAACGTACAGAACTTCCATCTGTCGTTCAAGGATGGTCT
GGCCTTCTGCGCCCTTATCCATCGCCATCGTCCAGATCTAATCGACTACG
CCAAGCTGTCCAAAGACAATCCTCTGGAGAATCTTAATACTGCCTTCGAT
GTGGCCGAGAAGTACCTGGATATTCCGCGCATGTTGGATCCAGATGATCT
CCAGAATACAGCTTTGCCCGATGAGCGGGCGGTGATGACGTATGTGTCCT
CGTACTATCACTGCTTCAGTGGCGCCCAAAAGGCGGAAACCGCTGCCAAC
CGGATCTGCAAGGTGCTCAAGGTCAACCAGGAGAACGAACGCCTCATGGA
GGAGTACGAGCGTCTGGCCAGTGATTTGCTGGAGTGGATCCGTCGCACCA
TGCCCTGGTTGAACTCGCGCCAGGCCGACAACTCGCTGGCAGGTGTGCAG
AAGAAGCTGGAGGAGTACCGCACCTACCGTCGCAAGCACAAGCCACCACG
TGTGGAGCAGAAGGCCAAGCTGGAGACCAACTTCAACACGCTGCAGACCA
AGCTGCGCCTGTCCAACCGGCCCGCCTACCTGCCCACCGAGGGCAAGACC
GTGTCCGACATCTCCAACTCGTGGAAGGGCCTGGAGCTGGCCGAGAAGGC
CTTTGAGGAATGGCTGCTGGCCGAGACCATGCGCCTGGAGCGCCTTGAAC
ATCTGGCCCAGAAGTTCAAGCACAAGGCCGATGCCCACGAGGACTGGACG
CGTGGCAAGGAGGAGATGCTGCAGTCGCAGGACTTCCGCCAGTGCAAGCT
CAACGAGCTGAAGGCCCTAAAGAAGAAGCACGAAGCCTTTGAGTCTGACC
TGGCCGCCCACCAGGATCGTGTGGAGCAGATTGCCGCCATCGCCCAGGAG
CTTAACACTCTGGAGTACCATGACTGTGTGTCTGTGAACGCCAGGTGCCA
GCGCATCTGCGACCAATGGGATCGCTTGGGTGCTCTTACCCAGCGCAGGC
GCACCGCCTTAGACGAGGCCGAGCGAATCCTGGAGAAGATCGACATCTTG
CATTTGGAGTTCGCGAAGCGTGCGGCGCCGTTCAACAACTGGCTGGATGG
TACGCGCGAGGATCTTGTGGACATGTTTATTGTACACACCATGGAGGAAA
TCCAAGGCCTGATCCAGGCGCACGACCAGTTCAAGGCGACCCTGGGTGAG
GCCGACAAGGAGTTCAACCTGATCGTGAACCTGGTCCGCGAAGTGGAGTC
GATTGTGAAGCAGCACCAGATCCCCGGCGGCCTAGAGAACCCCTACACCA
CCCTGACCGCCAACGACATGACGCGCAAGTGGAGCGACGTCCGCCAACTG
GTGCCCCAACGCGACCAGACTTTGGCCAACGAGCTGCGCAAGCAACAGAA
CAACGAAATGCTCCGCCGTCAGTTTGCCGAGAAGGCCAACATTGTCGGCC
CCTGGATCGAGCGGCAAATGGATGCTGTTACGGCCATCGGTATGGGACTG
CAGGGATCGCTGGAGGACCAACTGCACCGGCTCAAGGAGTACGAGCAGGC
CGTCTACGCCTACAAGCCGAACATTGAGGAGCTGGAGAAGATCCACCAAG
CGGTGCAGGAATCGATGATCTTCGAGAACCGATACACCAACTACACGATG
GAAACGCTGCGCGTCGGCTGGGAGCAGCTGCTTACATCTATCAACCGCAA
CATCAACGAGGTGGAGAACCAGATTCTCACCCGCGACTCCAAGGGCATTA
GCCAGGAGCAGCTGAACGAATTCCGCAGCAGCTTCAACCACTTCGACAAG
AACCGCACCGGCCGACTGTCGCCCGAGGAGTTCAAGTCGTGCTTGGTCTC
GTTGGGCTACTCGATTGGCAAGGATCGCCAGGGTGATTTGGACTTCCAGC
GCATCCTCGCCGTCGTCGATCCCAACAACACTGGCTACGTGCACTTCGAC
GCCTTCCTCGACTTCATGACCCGCGAGAGCACCGATACCGACACTGCCGA
ACAAGTCATCGACTCCTTCCGAATCCTGGCAGCCGACAAGCCATACATTT
TGCCCGACGAACTGCGTCGCGAGTTGCCGCCAGACCAGGCCGAGTACTGC
ATCCAGCGCATGCCGCCCTATAAGGGACCCAACGGAGTGCCCGGCGCCCT
GGACTACATGTCCTTCAGCACAGCTCTCTACGGCGAGACCGACTTGTAAG
AGCGCAAGGCACCACCCGCATCCGAAGGACTGCATCGGCGAACCCGAGCA
GAGCCAGATCATATAATAATGATAAACTTTAATAATAATAATATTAATAA
ACATAGATTTATTATACCTACACTCGTAACAGTAGCTGCAGAAGAACTTC
AGATCATCATGTGAGGATGAATATATTTATTAATTTCCGTCTCGAGCCGA
TGTATGCGACCCACACATACAAAACACACAAAAAACAAATGAAAAACAAA
CATATTATGAAATGAAACACACATACATTTAAAACATTTGTAAAACAGCA
AGGCAACCATAAACTGCATATCGAATATTTAAATCTAATTACAAAAACCA
AGTCCAAAAAACGCTAAAAAAAAGCTAAAACTTATTTTTTGAAATTTATG
TTAATAAAAACAAAATCCATACATAAAAAAAAAAAAAAAAAAAA

LD37956.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:50:32
Subject Length Description Subject Range Query Range Score Percent Strand
Actn.h 4838 Actn.h 104..3543 1..3440 17155 99.9 Plus
Actn-RA 3769 Actn-RA 144..3583 1..3440 17155 99.9 Plus
Actn.a 3570 Actn.a 1799..3533 1706..3440 8630 99.8 Plus
Actn.a 3570 Actn.a 88..1793 1..1706 8530 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:04:44
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 1919673..1920807 2840..1706 5675 100 Minus
chrX 22417052 chrX 1919014..1919599 3424..2839 2930 100 Minus
chrX 22417052 chrX 1924340..1924759 843..424 2100 100 Minus
chrX 22417052 chrX 1921418..1921769 1527..1176 1760 100 Minus
chrX 22417052 chrX 1928857..1929107 425..175 1225 99.2 Minus
chrX 22417052 chrX 1921182..1921362 1705..1525 905 100 Minus
chrX 22417052 chrX 1935957..1936134 178..1 890 100 Minus
chrX 22417052 chrX 1924113..1924268 996..841 780 100 Minus
chrX 22417052 chrX 1921833..1921931 1175..1077 480 99 Minus
chrX 22417052 chrX 1922562..1922649 1083..996 440 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:32:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:04:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2025775..2026909 2840..1706 5675 100 Minus
X 23542271 X 2025100..2025701 3440..2839 2965 99.5 Minus
X 23542271 X 2030442..2030861 843..424 2100 100 Minus
X 23542271 X 2027520..2027871 1527..1176 1760 100 Minus
X 23542271 X 2034955..2035205 425..175 1240 99.6 Minus
X 23542271 X 2027284..2027464 1705..1525 905 100 Minus
X 23542271 X 2042047..2042224 178..1 890 100 Minus
X 23542271 X 2030215..2030370 996..841 780 100 Minus
X 23542271 X 2027935..2028033 1175..1077 480 99 Minus
X 23542271 X 2028664..2028751 1083..996 440 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:16:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 2033873..2035007 2840..1706 5675 100 Minus
X 23527363 X 2033198..2033799 3440..2839 2965 99.5 Minus
X 23527363 X 2038540..2038959 843..424 2100 100 Minus
X 23527363 X 2035618..2035969 1527..1176 1760 100 Minus
X 23527363 X 2043053..2043303 425..175 1240 99.6 Minus
X 23527363 X 2035382..2035562 1705..1525 905 100 Minus
X 23527363 X 2050145..2050322 178..1 890 100 Minus
X 23527363 X 2038313..2038468 996..841 780 100 Minus
X 23527363 X 2036033..2036131 1175..1077 480 98.9 Minus
X 23527363 X 2036762..2036849 1083..996 440 100 Minus
Blast to na_te.dros performed 2019-03-16 22:04:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1477..1586 113..226 190 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2297..2442 108..252 187 61.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2263..2372 121..226 181 65.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2284..2425 88..225 178 60.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2768..2913 156..303 175 63.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6823..6901 156..235 172 70 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..6793 179..235 168 77.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..6812 179..233 167 78.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2357 175..226 161 78.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6779..6833 179..233 158 76.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6741..6853 115..226 157 64.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6847..7022 156..335 153 58.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2392 156..225 152 71.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2601..2675 157..235 151 69.6 Plus
roo 9092 roo DM_ROO 9092bp 1096..1156 172..235 151 73.4 Plus
roo 9092 roo DM_ROO 9092bp 1075..1139 172..233 147 72.3 Plus
roo 9092 roo DM_ROO 9092bp 1103..1163 157..215 147 73.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1580 179..242 146 71.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2783..2852 153..226 144 70.3 Plus
roo 9092 roo DM_ROO 9092bp 1077..1162 136..226 137 64.8 Plus
TART-A 13424 TART-A 13424bp 11239..11335 129..226 136 62.6 Plus
TART-A 13424 TART-A 13424bp 61..157 129..226 136 62.6 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3288..3341 173..226 135 72.2 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 975..1025 176..225 135 76.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2388..2456 157..226 131 67.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2373 184..252 126 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2499..2549 173..222 126 74.5 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 102..202 165..265 125 63.1 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9132..9232 165..265 125 63.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2588..2642 175..226 124 72.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2909..2962 156..210 119 70.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6512..6587 156..231 118 64.9 Plus

LD37956.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:05:23 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1921833..1921925 1083..1175 100 <- Minus
chrX 1922563..1922648 997..1082 100 <- Minus
chrX 1924113..1924266 843..996 100 <- Minus
chrX 1919014..1919597 2841..3424 100 <- Minus
chrX 1919673..1920807 1706..2840 100 <- Minus
chrX 1921182..1921360 1527..1705 100 <- Minus
chrX 1921419..1921769 1176..1526 100 <- Minus
chrX 1924341..1924757 426..842 100 <- Minus
chrX 1928857..1929103 179..425 99 <- Minus
chrX 1935957..1936134 1..178 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:02:37 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RA 1..2688 312..2999 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:19:47 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RA 1..2688 312..2999 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:09:06 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RA 1..2688 312..2999 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:45:58 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RA 1..2688 312..2999 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:32:21 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RA 1..2688 312..2999 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:02:36 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RA 88..3511 1..3424 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:19:47 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RA 88..3511 1..3424 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:09:06 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RA 88..3511 1..3424 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:45:58 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RA 88..3511 1..3424 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:32:21 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
Actn-RA 88..3511 1..3424 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:05:23 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
X 2028665..2028750 997..1082 100 <- Minus
X 2030215..2030368 843..996 100 <- Minus
X 2027521..2027871 1176..1526 100 <- Minus
X 2025116..2025699 2841..3424 100 <- Minus
X 2025775..2026909 1706..2840 100 <- Minus
X 2027284..2027462 1527..1705 100 <- Minus
X 2027935..2028027 1083..1175 100 <- Minus
X 2030443..2030859 426..842 100 <- Minus
X 2034955..2035201 179..425 100 <- Minus
X 2042047..2042224 1..178 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:05:23 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
X 2028665..2028750 997..1082 100 <- Minus
X 2030215..2030368 843..996 100 <- Minus
X 2027521..2027871 1176..1526 100 <- Minus
X 2025116..2025699 2841..3424 100 <- Minus
X 2025775..2026909 1706..2840 100 <- Minus
X 2027284..2027462 1527..1705 100 <- Minus
X 2027935..2028027 1083..1175 100 <- Minus
X 2030443..2030859 426..842 100 <- Minus
X 2034955..2035201 179..425 100 <- Minus
X 2042047..2042224 1..178 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:05:23 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
X 2028665..2028750 997..1082 100 <- Minus
X 2030215..2030368 843..996 100 <- Minus
X 2027521..2027871 1176..1526 100 <- Minus
X 2025116..2025699 2841..3424 100 <- Minus
X 2025775..2026909 1706..2840 100 <- Minus
X 2027284..2027462 1527..1705 100 <- Minus
X 2027935..2028027 1083..1175 100 <- Minus
X 2030443..2030859 426..842 100 <- Minus
X 2034955..2035201 179..425 100 <- Minus
X 2042047..2042224 1..178 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:09:06 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1921968..1922060 1083..1175 100 <- Minus
arm_X 1922698..1922783 997..1082 100 <- Minus
arm_X 1924248..1924401 843..996 100 <- Minus
arm_X 1936080..1936257 1..178 100   Minus
arm_X 1919149..1919732 2841..3424 100 <- Minus
arm_X 1919808..1920942 1706..2840 100 <- Minus
arm_X 1921317..1921495 1527..1705 100 <- Minus
arm_X 1921554..1921904 1176..1526 100 <- Minus
arm_X 1924476..1924892 426..842 100 <- Minus
arm_X 1928988..1929234 179..425 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:22:22 Download gff for LD37956.complete
Subject Subject Range Query Range Percent Splice Strand
X 2038313..2038466 843..996 100 <- Minus
X 2033214..2033797 2841..3424 100 <- Minus
X 2033873..2035007 1706..2840 100 <- Minus
X 2035382..2035560 1527..1705 100 <- Minus
X 2035619..2035969 1176..1526 100 <- Minus
X 2036033..2036125 1083..1175 100 <- Minus
X 2036763..2036848 997..1082 100 <- Minus
X 2038541..2038957 426..842 100 <- Minus
X 2043053..2043299 179..425 100 <- Minus
X 2050145..2050322 1..178 100   Minus

LD37956.pep Sequence

Translation from 311 to 2998

> LD37956.pep
MMMENGLSMEYGDGYMEQEEEWEREGLLDPAWEKQQKKTFTAWCNSHLRK
AGTAIDNIEEDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKAL
DFIASKGVHLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAK
EGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLS
KDNPLENLNTAFDVAEKYLDIPRMLDPDDLQNTALPDERAVMTYVSSYYH
CFSGAQKAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRRTMPWL
NSRQADNSLAGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRL
SNRPAYLPTEGKTVSDISNSWKGLELAEKAFEEWLLAETMRLERLEHLAQ
KFKHKADAHEDWTRGKEEMLQSQDFRQCKLNELKALKKKHEAFESDLAAH
QDRVEQIAAIAQELNTLEYHDCVSVNARCQRICDQWDRLGALTQRRRTAL
DEAERILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGL
IQAHDQFKATLGEADKEFNLIVNLVREVESIVKQHQIPGGLENPYTTLTA
NDMTRKWSDVRQLVPQRDQTLANELRKQQNNEMLRRQFAEKANIVGPWIE
RQMDAVTAIGMGLQGSLEDQLHRLKEYEQAVYAYKPNIEELEKIHQAVQE
SMIFENRYTNYTMETLRVGWEQLLTSINRNINEVENQILTRDSKGISQEQ
LNEFRSSFNHFDKNRTGRLSPEEFKSCLVSLGYSIGKDRQGDLDFQRILA
VVDPNNTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAADKPYILPDE
LRRELPPDQAEYCIQRMPPYKGPNGVPGALDYMSFSTALYGETDL*

LD37956.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:19:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21987-PA 921 GF21987-PA 1..921 1..895 4771 96.4 Plus
Dana\GF21115-PA 2291 GF21115-PA 49..561 33..565 1098 43 Plus
Dana\GF24206-PA 4383 GF24206-PA 48..553 5..507 943 40.9 Plus
Dana\GF24962-PA 2448 GF24962-PA 1961..2446 401..890 720 33.7 Plus
Dana\GF11157-PA 8806 GF11157-PA 162..604 36..489 659 35.4 Plus
Dana\GF24962-PA 2448 GF24962-PA 1729..2191 264..758 200 23.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:19:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12661-PA 921 GG12661-PA 1..921 1..895 4797 97.2 Plus
Dere\GG19125-PA 2291 GG19125-PA 49..561 33..565 1097 43 Plus
Dere\GG15134-PA 4354 GG15134-PA 48..553 5..507 937 40.7 Plus
Dere\GG14560-PA 2447 GG14560-PA 1960..2445 401..890 717 33.7 Plus
Dere\GG25055-PA 8391 GG25055-PA 637..889 33..252 407 38 Plus
Dere\GG14560-PA 2447 GG14560-PA 1728..2190 264..758 204 23.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:19:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24410-PA 921 GH24410-PA 1..921 1..895 4776 96.4 Plus
Dgri\GH17926-PA 2291 GH17926-PA 49..561 33..565 1088 43 Plus
Dgri\kst-PA 4382 GH14869-PA 56..532 36..507 946 41.6 Plus
Dgri\GH15717-PA 2438 GH15717-PA 1951..2436 401..890 711 33.3 Plus
Dgri\GH10367-PA 8390 GH10367-PA 658..906 33..247 387 38.6 Plus
Dgri\GH15717-PA 2438 GH15717-PA 1719..2181 264..758 204 23.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:50
Subject Length Description Subject Range Query Range Score Percent Strand
Actn-PA 895 CG4376-PA 1..895 1..895 4678 100 Plus
Actn-PF 897 CG4376-PF 1..897 1..895 4665 99.8 Plus
Actn-PI 895 CG4376-PI 1..895 1..895 4636 99.1 Plus
Actn-PD 895 CG4376-PD 1..895 1..895 4636 99.1 Plus
Actn-PB 895 CG4376-PB 1..895 1..895 4636 99.1 Plus
Actn-PJ 917 CG4376-PJ 1..917 1..895 4603 96.7 Plus
Actn-PH 917 CG4376-PH 1..917 1..895 4603 96.7 Plus
Actn-PG 917 CG4376-PG 1..917 1..895 4603 96.7 Plus
Actn-PC 917 CG4376-PC 1..917 1..895 4603 96.7 Plus
beta-Spec-PC 2147 CG5870-PC 27..741 13..738 1110 36.2 Plus
beta-Spec-PA 2291 CG5870-PA 27..741 13..738 1110 36.2 Plus
beta-Spec-PB 2308 CG5870-PB 27..741 13..738 1110 36.2 Plus
kst-PG 4321 CG12008-PG 48..610 5..569 946 37.7 Plus
kst-PE 4337 CG12008-PE 48..610 5..569 946 37.7 Plus
kst-PF 4097 CG12008-PF 26..559 36..569 941 38.3 Plus
kst-PA 4097 CG12008-PA 26..559 36..569 941 38.3 Plus
kst-PB 4118 CG12008-PB 26..559 36..569 941 38.3 Plus
kst-PH 4207 CG12008-PH 26..559 36..569 941 38.3 Plus
kst-PC 4207 CG12008-PC 26..559 36..569 941 38.3 Plus
alpha-Spec-PA 2415 CG1977-PA 1833..2413 292..890 740 30.4 Plus
alpha-Spec-PC 2447 CG1977-PC 1865..2445 292..890 740 30.4 Plus
alpha-Spec-PD 2425 CG1977-PD 1833..2423 292..890 731 30.1 Plus
alpha-Spec-PB 2457 CG1977-PB 1865..2455 292..890 731 30.1 Plus
shot-PE 5201 CG18076-PE 150..592 36..489 677 35.6 Plus
shot-PJ 5368 CG18076-PJ 39..481 36..489 677 35.6 Plus
shot-PK 5370 CG18076-PK 39..481 36..489 677 35.6 Plus
shot-PI 5375 CG18076-PI 39..481 36..489 677 35.6 Plus
shot-PG 5385 CG18076-PG 39..481 36..489 677 35.6 Plus
shot-PN 5388 CG18076-PN 39..481 36..489 677 35.6 Plus
shot-PB 5390 CG18076-PB 39..481 36..489 677 35.6 Plus
shot-PM 5479 CG18076-PM 150..592 36..489 677 35.6 Plus
shot-PL 5486 CG18076-PL 150..592 36..489 677 35.6 Plus
shot-PO 5499 CG18076-PO 150..592 36..489 677 35.6 Plus
shot-PA 5501 CG18076-PA 150..592 36..489 677 35.6 Plus
shot-PZ 5394 CG18076-PZ 39..487 36..489 660 35.1 Plus
shot-PAA 5408 CG18076-PAA 39..501 36..489 646 34.1 Plus
Msp300-PB 8382 CG42768-PB 629..879 33..250 388 38.3 Plus
Msp300-PK 11917 CG42768-PK 270..520 33..250 388 38.3 Plus
Msp300-PH 11986 CG42768-PH 270..520 33..250 388 38.3 Plus
Msp300-PI 11999 CG42768-PI 270..520 33..250 388 38.3 Plus
Msp300-PL 12308 CG42768-PL 629..879 33..250 388 38.3 Plus
Msp300-PD 12345 CG42768-PD 629..879 33..250 388 38.3 Plus
shot-PQ 5155 CG18076-PQ 208..551 136..489 380 29.3 Plus
shot-PC 5160 CG18076-PC 208..551 136..489 380 29.3 Plus
shot-PAD 5434 CG18076-PAD 208..551 136..489 380 29.3 Plus
shot-PX 5434 CG18076-PX 208..551 136..489 380 29.3 Plus
shot-PP 5458 CG18076-PP 208..551 136..489 380 29.3 Plus
shot-PAC 5462 CG18076-PAC 208..551 136..489 380 29.3 Plus
shot-PY 5463 CG18076-PY 208..551 136..489 380 29.3 Plus
shot-PH 8805 CG18076-PH 208..551 136..489 380 29.3 Plus
Msp300-PJ 7962 CG42768-PJ 270..538 33..250 367 35.4 Plus
alpha-Spec-PA 2415 CG1977-PA 1681..2158 253..758 260 22.4 Plus
alpha-Spec-PC 2447 CG1977-PC 1713..2190 253..758 260 22.4 Plus
alpha-Spec-PD 2425 CG1977-PD 1681..2158 253..758 260 22.4 Plus
alpha-Spec-PB 2457 CG1977-PB 1713..2190 253..758 260 22.4 Plus
alpha-Spec-PA 2415 CG1977-PA 144..468 267..616 177 22.6 Plus
alpha-Spec-PC 2447 CG1977-PC 144..468 267..616 177 22.6 Plus
alpha-Spec-PD 2425 CG1977-PD 144..468 267..616 177 22.6 Plus
alpha-Spec-PB 2457 CG1977-PB 144..468 267..616 177 22.6 Plus
alpha-Spec-PA 2415 CG1977-PA 1080..1515 284..738 174 19.7 Plus
alpha-Spec-PD 2425 CG1977-PD 1080..1515 284..738 174 19.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:19:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15429-PA 921 GI15429-PA 1..921 1..895 4772 96.3 Plus
Dmoj\GI16305-PA 2292 GI16305-PA 49..595 33..594 1097 41.7 Plus
Dmoj\GI12841-PA 4394 GI12841-PA 77..553 36..507 964 42.4 Plus
Dmoj\GI12773-PA 2441 GI12773-PA 1954..2439 401..890 712 33.5 Plus
Dmoj\GI21363-PA 7182 GI21363-PA 269..517 33..247 390 38.6 Plus
Dmoj\GI12773-PA 2441 GI12773-PA 1722..2184 264..758 207 23.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:19:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15130-PA 558 GL15130-PA 1..506 1..506 2670 98.2 Plus
Dper\GL15987-PA 2250 GL15987-PA 49..561 33..565 1094 42.9 Plus
Dper\GL13263-PA 361 GL13263-PA 36..361 2..330 709 45 Plus
Dper\GL17079-PA 4806 GL17079-PA 163..605 36..489 655 35.2 Plus
Dper\GL16211-PA 296 GL16211-PA 8..294 607..890 504 37.1 Plus
Dper\GL15130-PA 558 GL15130-PA 256..558 616..895 306 32.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:19:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18143-PA 921 GA18143-PA 1..921 1..895 4787 96.7 Plus
Dpse\GA19192-PA 2291 GA19192-PA 49..561 33..565 1094 42.9 Plus
Dpse\GA11331-PA 4408 GA11331-PA 82..558 36..507 939 41.6 Plus
Dpse\GA15168-PA 2415 GA15168-PA 1928..2413 401..890 712 33.7 Plus
Dpse\GA24356-PA 8812 GA24356-PA 164..606 36..489 655 35.2 Plus
Dpse\GA15168-PA 2415 GA15168-PA 1696..2158 264..758 200 23.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:19:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22606-PA 310 GM22606-PA 1..287 258..549 1436 93.8 Plus
Dsec\GM18928-PA 311 GM18928-PA 1..258 1..258 1359 96.5 Plus
Dsec\GM13519-PA 1245 GM13519-PA 49..561 33..565 1099 43 Plus
Dsec\GM14568-PA 4319 GM14568-PA 77..553 36..507 934 41.4 Plus
Dsec\GM14169-PA 2447 GM14169-PA 1960..2445 401..890 717 33.7 Plus
Dsec\GM22606-PA 310 GM22606-PA 12..310 625..895 231 28.8 Plus
Dsec\GM14169-PA 2447 GM14169-PA 1728..2190 264..758 196 23.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:19:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15677-PA 1205 GD15677-PA 49..561 33..565 1099 43 Plus
Dsim\GD13758-PA 1393 GD13758-PA 174..635 51..507 872 40.2 Plus
Dsim\GD13438-PA 2447 GD13438-PA 1960..2445 401..890 716 33.7 Plus
Dsim\GD25733-PA 4046 GD25733-PA 208..551 136..489 355 29.3 Plus
Dsim\GD15171-PA 447 GD15171-PA 25..240 36..252 348 36.8 Plus
Dsim\GD13438-PA 2447 GD13438-PA 1728..2190 264..758 198 23.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:19:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16390-PA 895 GJ16390-PA 1..895 1..895 4770 98.3 Plus
Dvir\GJ15641-PA 2291 GJ15641-PA 49..561 33..565 1091 42.9 Plus
Dvir\GJ12986-PA 4394 GJ12986-PA 77..553 36..507 968 42.7 Plus
Dvir\GJ16071-PA 2441 GJ16071-PA 1954..2439 401..890 711 33.3 Plus
Dvir\GJ11158-PA 8387 GJ11158-PA 641..905 33..260 406 37.8 Plus
Dvir\GJ16071-PA 2441 GJ16071-PA 1722..2184 264..758 206 23.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:19:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25747-PA 943 GK25747-PA 1..943 1..895 4762 94.4 Plus
Dwil\GK16406-PA 2292 GK16406-PA 49..561 33..565 1095 43 Plus
Dwil\GK20379-PA 4389 GK20379-PA 58..534 36..507 943 41.4 Plus
Dwil\GK20514-PA 2417 GK20514-PA 1930..2415 401..890 716 33.7 Plus
Dwil\GK24496-PA 7988 GK24496-PA 254..501 33..247 386 38.4 Plus
Dwil\GK20514-PA 2417 GK20514-PA 1698..2160 264..758 202 23.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:19:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16989-PA 883 GE16989-PA 1..883 1..895 4725 98.2 Plus
Dyak\GE17676-PA 2289 GE17676-PA 49..561 33..565 1097 43 Plus
Dyak\GE21360-PA 4355 GE21360-PA 77..553 36..507 934 41.4 Plus
Dyak\GE20915-PA 2447 GE20915-PA 1960..2445 401..890 716 33.7 Plus
Dyak\GE11346-PA 8015 GE11346-PA 274..521 33..247 390 38.4 Plus
Dyak\GE20915-PA 2447 GE20915-PA 1728..2190 264..758 201 23.4 Plus

LD37956.hyp Sequence

Translation from 311 to 2998

> LD37956.hyp
MMMENGLSMEYGDGYMEQEEEWEREGLLDPAWEKQQKKTFTAWCNSHLRK
AGTAIDNIEEDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKAL
DFIASKGVHLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAK
EGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLS
KDNPLENLNTAFDVAEKYLDIPRMLDPDDLQNTALPDERAVMTYVSSYYH
CFSGAQKAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRRTMPWL
NSRQADNSLAGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRL
SNRPAYLPTEGKTVSDISNSWKGLELAEKAFEEWLLAETMRLERLEHLAQ
KFKHKADAHEDWTRGKEEMLQSQDFRQCKLNELKALKKKHEAFESDLAAH
QDRVEQIAAIAQELNTLEYHDCVSVNARCQRICDQWDRLGALTQRRRTAL
DEAERILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGL
IQAHDQFKATLGEADKEFNLIVNLVREVESIVKQHQIPGGLENPYTTLTA
NDMTRKWSDVRQLVPQRDQTLANELRKQQNNEMLRRQFAEKANIVGPWIE
RQMDAVTAIGMGLQGSLEDQLHRLKEYEQAVYAYKPNIEELEKIHQAVQE
SMIFENRYTNYTMETLRVGWEQLLTSINRNINEVENQILTRDSKGISQEQ
LNEFRSSFNHFDKNRTGRLSPEEFKSCLVSLGYSIGKDRQGDLDFQRILA
VVDPNNTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAADKPYILPDE
LRRELPPDQAEYCIQRMPPYKGPNGVPGALDYMSFSTALYGETDL*

LD37956.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:17:19
Subject Length Description Subject Range Query Range Score Percent Strand
Actn-PA 895 CG4376-PA 1..895 1..895 4678 100 Plus
Actn-PF 897 CG4376-PF 1..897 1..895 4665 99.8 Plus
Actn-PI 895 CG4376-PI 1..895 1..895 4636 99.1 Plus
Actn-PD 895 CG4376-PD 1..895 1..895 4636 99.1 Plus
Actn-PB 895 CG4376-PB 1..895 1..895 4636 99.1 Plus