BDGP Sequence Production Resources |
Search the DGRC for LD37974
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 379 |
Well: | 74 |
Vector: | pOT2 |
Associated Gene/Transcript | PIG-U-RA |
Protein status: | LD37974.pep: gold |
Preliminary Size: | 1528 |
Sequenced Size: | 1477 |
Gene | Date | Evidence |
---|---|---|
CG13089 | 2001-01-01 | Release 2 assignment |
CG13089 | 2001-09-19 | Blastp of sequenced clone |
CG13089 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13089 | 2008-04-29 | Release 5.5 accounting |
CG13089 | 2008-08-15 | Release 5.9 accounting |
CG13089 | 2008-12-18 | 5.12 accounting |
1477 bp (1477 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058668
> LD37974.complete GCGGAGTCCGTTCACAAAAACTATGCCCAACTAGAAGATGGATTCGAAGT TCTTTAAACTGCTCCTGCTGGGCGGCGCCGTGCGCTTCTACTTCTGTCGC ACGCCGCTGGCTCCGATGATTGGCAACCGAGTGGAGTTCGCGACACCTTT AAATTCACACAAGCGCATGCAAGAGGGGATATTTCTTCTACAGAGTGGCA TTGATCCCTATCTGGGCGACCTGGTACACGAATCGCCGCTGATACTCAGC GCGCTCTCCGGATTGTTTCAAAAATACCCGCAGTTTCTGCCGATATTCTA CATAATCCTGGATATCTGCACGGCGGCCCTGCTTTATGCGATGAGTCTGA GATTCGTCAAGCAAAAGCAGGATCAGCAGGACAAGGAGCGAAAGGAGTAT GCCAAGGATACGGAAGAGCTGCAGTTTGGCCCGCTGGACAAGCTTGACAT TCCGGAACTTGTGATCGTGGCATATCTTTTCAGTCCACTGACTGTTATGA GCTGCATTGGAATGACCTCCACCGTGATAAGCAATCTGTTCCTGGCTTTC TTTTTCTACTGCCTCGTGAAGGGAATGCTCATTCCATGCCTTCTAGTCCT CGCGTTCGAAACTGTCCGCAGCTTCTATCCCATTGTACTTATAGCACCAC TGCTCCTGGTCTTTTCACGGAATTCGGTCAGGAGGGGTGTGGCTATAGCG GCGCTCTTTATCGTCAGTTGTCTAATCGTGGCAGTTGCGAACTATTTTGT GCTGAACAGCTGGAACTTCCTGGATGGAACGTTGGGTTTTATATTTTATT TCCGCGATCTACAGCCAAATATCGGTCTCTTCTGGTACTTTTTTACTGAA ATGTTTGAGCACTTCCGCACCATGTTCCTAATCACATTCCAATTGAATGC CACCGTATTATACCTGGTGCCACTAAGTATTAAGCTGCGCAAGGAGCCCC TACTGCTAGCCACGGTATTGGTGGCCCTTATGGCCGTTTTTAGGGCGTAT CCCAGCCTGGGCGATGTCGGCTTTTATCTGGCCTTGCTTCCGCTGTGGAA AAGATGTTGGAAATTCATGGCCCATGGCTTTGTGGTCTTTACGTTCTTCC TGGTCACTCTATCTATGATGGGAGCCCTTTGGCATTTGTGGATCTATGCA GGATCGGCAAATGCCAATTTCTATTTCGGTGCCACTCTTGCGTTTTCCAC TGGGCAGATATTTCTAATCACCGATCTGCTGTTCGCGCACGTTAAACGTG AGTTCTGCTTGTTCAATGGTCAGAAGATTCTGATCGATGGCGAGGAAGCG AGGATAGTCTTAAAGTAAGCATTAACAGTATCAGTATGACGGACAGAATC CAGGAACTTTGTACAGATGCAGAATGCGCTTCCTAATGGCAGCCGAGCAT ACTCTTAAGATAAGTTAACTCCGAACAATATCAGATTAAACAAAATATTT TATTTGATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13089-RA | 1512 | CG13089-RA | 41..1498 | 1..1458 | 7290 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8514255..8514879 | 168..792 | 3125 | 100 | Plus |
chr2L | 23010047 | chr2L | 8515274..8515667 | 1065..1458 | 1970 | 100 | Plus |
chr2L | 23010047 | chr2L | 8514942..8515213 | 793..1064 | 1360 | 100 | Plus |
chr2L | 23010047 | chr2L | 8514028..8514194 | 1..167 | 835 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8515343..8515967 | 168..792 | 3125 | 100 | Plus |
2L | 23513712 | 2L | 8516362..8516755 | 1065..1458 | 1970 | 100 | Plus |
2L | 23513712 | 2L | 8516030..8516301 | 793..1064 | 1360 | 100 | Plus |
2L | 23513712 | 2L | 8515116..8515282 | 1..167 | 835 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8515343..8515967 | 168..792 | 3125 | 100 | Plus |
2L | 23513712 | 2L | 8516362..8516755 | 1065..1458 | 1970 | 100 | Plus |
2L | 23513712 | 2L | 8516030..8516301 | 793..1064 | 1360 | 100 | Plus |
2L | 23513712 | 2L | 8515116..8515282 | 1..167 | 835 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
springer | 7546 | springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. | 3472..3534 | 299..235 | 122 | 67.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8515274..8515667 | 1065..1458 | 100 | Plus | |
chr2L | 8514028..8514194 | 1..167 | 100 | -> | Plus |
chr2L | 8514255..8514879 | 168..792 | 100 | -> | Plus |
chr2L | 8514942..8515213 | 793..1064 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13089-RA | 1..1281 | 38..1318 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13089-RA | 1..1281 | 38..1318 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PIG-U-RA | 1..1281 | 38..1318 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13089-RA | 1..1281 | 38..1318 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PIG-U-RA | 1..1281 | 38..1318 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13089-RA | 19..1476 | 1..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13089-RA | 19..1476 | 1..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PIG-U-RA | 21..1478 | 1..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13089-RA | 19..1476 | 1..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PIG-U-RA | 21..1478 | 1..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8515116..8515282 | 1..167 | 100 | -> | Plus |
2L | 8515343..8515967 | 168..792 | 100 | -> | Plus |
2L | 8516030..8516301 | 793..1064 | 100 | -> | Plus |
2L | 8516362..8516755 | 1065..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8515116..8515282 | 1..167 | 100 | -> | Plus |
2L | 8515343..8515967 | 168..792 | 100 | -> | Plus |
2L | 8516030..8516301 | 793..1064 | 100 | -> | Plus |
2L | 8516362..8516755 | 1065..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8515116..8515282 | 1..167 | 100 | -> | Plus |
2L | 8515343..8515967 | 168..792 | 100 | -> | Plus |
2L | 8516030..8516301 | 793..1064 | 100 | -> | Plus |
2L | 8516362..8516755 | 1065..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8516030..8516301 | 793..1064 | 100 | -> | Plus |
arm_2L | 8515116..8515282 | 1..167 | 100 | -> | Plus |
arm_2L | 8515343..8515967 | 168..792 | 100 | -> | Plus |
arm_2L | 8516362..8516755 | 1065..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8515343..8515967 | 168..792 | 100 | -> | Plus |
2L | 8516030..8516301 | 793..1064 | 100 | -> | Plus |
2L | 8516362..8516755 | 1065..1458 | 100 | Plus | |
2L | 8515116..8515282 | 1..167 | 100 | -> | Plus |
Translation from 37 to 1317
> LD37974.hyp MDSKFFKLLLLGGAVRFYFCRTPLAPMIGNRVEFATPLNSHKRMQEGIFL LQSGIDPYLGDLVHESPLILSALSGLFQKYPQFLPIFYIILDICTAALLY AMSLRFVKQKQDQQDKERKEYAKDTEELQFGPLDKLDIPELVIVAYLFSP LTVMSCIGMTSTVISNLFLAFFFYCLVKGMLIPCLLVLAFETVRSFYPIV LIAPLLLVFSRNSVRRGVAIAALFIVSCLIVAVANYFVLNSWNFLDGTLG FIFYFRDLQPNIGLFWYFFTEMFEHFRTMFLITFQLNATVLYLVPLSIKL RKEPLLLATVLVALMAVFRAYPSLGDVGFYLALLPLWKRCWKFMAHGFVV FTFFLVTLSMMGALWHLWIYAGSANANFYFGATLAFSTGQIFLITDLLFA HVKREFCLFNGQKILIDGEEARIVLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PIG-U-PA | 426 | CG13089-PA | 1..426 | 1..426 | 2200 | 100 | Plus |
Translation from 37 to 1317
> LD37974.pep MDSKFFKLLLLGGAVRFYFCRTPLAPMIGNRVEFATPLNSHKRMQEGIFL LQSGIDPYLGDLVHESPLILSALSGLFQKYPQFLPIFYIILDICTAALLY AMSLRFVKQKQDQQDKERKEYAKDTEELQFGPLDKLDIPELVIVAYLFSP LTVMSCIGMTSTVISNLFLAFFFYCLVKGMLIPCLLVLAFETVRSFYPIV LIAPLLLVFSRNSVRRGVAIAALFIVSCLIVAVANYFVLNSWNFLDGTLG FIFYFRDLQPNIGLFWYFFTEMFEHFRTMFLITFQLNATVLYLVPLSIKL RKEPLLLATVLVALMAVFRAYPSLGDVGFYLALLPLWKRCWKFMAHGFVV FTFFLVTLSMMGALWHLWIYAGSANANFYFGATLAFSTGQIFLITDLLFA HVKREFCLFNGQKILIDGEEARIVLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15532-PA | 426 | GF15532-PA | 1..426 | 1..426 | 1838 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25290-PA | 426 | GG25290-PA | 1..426 | 1..426 | 2065 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10958-PA | 426 | GH10958-PA | 1..426 | 1..426 | 1745 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PIG-U-PA | 426 | CG13089-PA | 1..426 | 1..426 | 2200 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10442-PA | 426 | GI10442-PA | 1..426 | 1..426 | 1685 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26132-PA | 426 | GL26132-PA | 1..426 | 1..426 | 1757 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12039-PA | 426 | GA12039-PA | 1..426 | 1..426 | 1766 | 80.8 | Plus |
Dpse\GA25302-PA | 426 | GA25302-PA | 1..426 | 1..426 | 1757 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17022-PA | 393 | GM17022-PA | 1..393 | 1..426 | 1949 | 89.4 | Plus |
Dsec\GM17396-PA | 151 | GM17396-PA | 1..151 | 102..252 | 752 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23551-PA | 426 | GD23551-PA | 1..426 | 1..426 | 2194 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21659-PA | 426 | GJ21659-PA | 1..426 | 1..426 | 1758 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24175-PA | 426 | GK24175-PA | 1..426 | 1..426 | 1633 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18782-PA | 426 | GE18782-PA | 1..426 | 1..426 | 2165 | 96.2 | Plus |