BDGP Sequence Production Resources |
Search the DGRC for LD38070
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 380 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7288-RA |
Protein status: | LD38070.pep: gold |
Preliminary Size: | 1754 |
Sequenced Size: | 1700 |
Gene | Date | Evidence |
---|---|---|
CG7288 | 2001-01-01 | Release 2 assignment |
CG7288 | 2001-10-10 | Blastp of sequenced clone |
CG7288 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7288 | 2008-04-29 | Release 5.5 accounting |
CG7288 | 2008-08-15 | Release 5.9 accounting |
CG7288 | 2008-12-18 | 5.12 accounting |
1700 bp (1700 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061442
> LD38070.complete CTGCGGCCAGTCGGACAAACAGTCAACAAAAGTCTTAATTTTAGTTTTAT ATGAATTACTGACTGAATCAGCTGGAAAAATGGCGCAAACGCAAGCTCCA GCCGCCAAGCGCATGAAGCTGGAGAAGACGCCGGCAAATCCCGTCGAAGA GGATGAGACGCCCTCCGTGTTCAATCCGAAGTACAGGGTGTGTCCCTACT TGGACACCATCAACCGTAACCTGCTGGATTTCGATTTCGAGAAGCTTTGC TCCATTTCGCTGACGAGGATCAATGTTTATGCCTGCCTGGTGTGCGGCAA GTACTTCCAGGGACGTGGCACCAACACCCACGCCTACACACATTCCGTGG GCGAGGCTCATCACGTGTTCCTCAATCTGCACACGCTGCGATTCTACTGC CTGCCGGATAATTACGAGATCATCGACTCCTCGTTGGACGATATCAAATA CGTGCTAAATCCAACGTTCACACGCCAGGAGATCAGCAAGTTGGATCAGT TACAGCCGAAGCATTCGCGAACCGTGGACGGTGTTCTGTACTTACCCGGC GTCGTGGGTTTGAACAACATCAAAGCGAACGACTACTGCAATGTGGTGCT GCATGCACTCTCCCACGTCGGTCCACTTAGGGACTACTTCCTGCAAAAGC AAAGCTATGCGCATGTCGTGCGGCCACCTGGAGATTCCGTGTTCACGCTG GTGCAACGTTTCGGCGAGCTAATGCGCAAGATGTGGAATCCGCGGAACTT TAAGTCGCACGTTTCGCCACACGAGATGCTGCAAGCTGTGGTGCTTTGGT CCAGCAAGCGTTTCCAGATCACCGAGCAAGGCGATCCCATTGACTTTCTG TCCTGGTTCCTCAATACACTGCACCGCGCCCTCAAGGGCAACAAACATCC GAATTCTTCTATACTCTACAAGATATTTCTGGGCGAGATGAAGATCTACA CGCGCAAGATGCCGCCCGTCGAGTTGGACGACGCTGCCAAGGCGCAACTG CTGGCCACCGAGGAGTACAAGGACCAGGTGGAGGACAAAAATTTCATCTA CCTCACATGCGATCTACCTCCGCCGCCGCTGTTCACCGACGAGTTTCGCG AGAACATCATACCGCAGGTGAACTTATATCAGCTGCTGAGCAAGTTCAAT GGCACTGCCGAAAAGGAGTACAAGACCTACAAGGCTAACTTTATGAAGCG CTTCGAGATCACCCGCCTGCCGCAGTTCATCATTCTGTACATCAAGCGAT TTACCAAGAACACATTCTTCCTGGAAAAGAATCCCACCATTGTGAACTTT CCCATCAAGCACGTGGACTTTGGCGACATTCTGGGCATGCGGCAGCGCGA CAAGGATGTCAAGGATACGAAATACAATCTGGTGGCCAATATTGTGCACG ACGGCGATCCCAAGAAGGGCACCTATCGTGCCCACATCCTGCACAAGGCC AACGGTCAGTGGTACGAGATGCAGGATCTGCATGTCACCGAGATACTGCC GCAGATGATCACGCTCACCGAGTCCTACATCCAAATCTACGAGCGCTGTC CAAACTCCTCGTGATCCACCTGACTTTTAATAACTCCTAACTATATTTCG GTTAACAAACTCCATGATAAAAAATAAAATATGCTGTAGTCGAGTGTAGC GACTATGAGTGGCCCTTGAATAGGAGAAATGTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7288-RA | 1726 | CG7288-RA | 23..1705 | 1..1683 | 8415 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 18747632..18748786 | 155..1309 | 5775 | 100 | Plus |
chrX | 22417052 | chrX | 18748839..18749216 | 1305..1682 | 1735 | 98.4 | Plus |
chrX | 22417052 | chrX | 18747360..18747460 | 1..101 | 490 | 99 | Plus |
chrX | 22417052 | chrX | 18747521..18747576 | 100..155 | 280 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 18858488..18859642 | 155..1309 | 5775 | 100 | Plus |
X | 23542271 | X | 18859695..18860073 | 1305..1683 | 1880 | 99.7 | Plus |
X | 23542271 | X | 18858216..18858316 | 1..101 | 505 | 100 | Plus |
X | 23542271 | X | 18858377..18858432 | 100..155 | 280 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 18866586..18867740 | 155..1309 | 5775 | 100 | Plus |
X | 23527363 | X | 18867793..18868171 | 1305..1683 | 1880 | 99.7 | Plus |
X | 23527363 | X | 18866314..18866414 | 1..101 | 505 | 100 | Plus |
X | 23527363 | X | 18866475..18866530 | 100..155 | 280 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18747360..18747460 | 1..101 | 99 | -> | Plus |
chrX | 18747523..18747576 | 102..155 | 100 | -> | Plus |
chrX | 18747633..18748785 | 156..1308 | 100 | -> | Plus |
chrX | 18748843..18749216 | 1309..1682 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7288-RA | 1..1485 | 80..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7288-RA | 1..1485 | 80..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7288-RA | 1..1485 | 80..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7288-RA | 1..1485 | 80..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7288-RA | 1..1485 | 80..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7288-RA | 1..1682 | 1..1682 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7288-RA | 1..1682 | 1..1682 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7288-RA | 14..1695 | 1..1682 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7288-RA | 1..1682 | 1..1682 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7288-RA | 14..1695 | 1..1682 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18858216..18858316 | 1..101 | 100 | -> | Plus |
X | 18858379..18858432 | 102..155 | 100 | -> | Plus |
X | 18858489..18859641 | 156..1308 | 100 | -> | Plus |
X | 18859699..18860072 | 1309..1682 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18858216..18858316 | 1..101 | 100 | -> | Plus |
X | 18858379..18858432 | 102..155 | 100 | -> | Plus |
X | 18858489..18859641 | 156..1308 | 100 | -> | Plus |
X | 18859699..18860072 | 1309..1682 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18858216..18858316 | 1..101 | 100 | -> | Plus |
X | 18858379..18858432 | 102..155 | 100 | -> | Plus |
X | 18858489..18859641 | 156..1308 | 100 | -> | Plus |
X | 18859699..18860072 | 1309..1682 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18752249..18752349 | 1..101 | 100 | -> | Plus |
arm_X | 18752412..18752465 | 102..155 | 100 | -> | Plus |
arm_X | 18752522..18753674 | 156..1308 | 100 | -> | Plus |
arm_X | 18753732..18754105 | 1309..1682 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18866587..18867739 | 156..1308 | 100 | -> | Plus |
X | 18867797..18868170 | 1309..1682 | 100 | Plus | |
X | 18866314..18866414 | 1..101 | 100 | -> | Plus |
X | 18866477..18866530 | 102..155 | 100 | -> | Plus |
Translation from 0 to 1563
> LD38070.hyp CGQSDKQSTKVLILVLYELLTESAGKMAQTQAPAAKRMKLEKTPANPVEE DETPSVFNPKYRVCPYLDTINRNLLDFDFEKLCSISLTRINVYACLVCGK YFQGRGTNTHAYTHSVGEAHHVFLNLHTLRFYCLPDNYEIIDSSLDDIKY VLNPTFTRQEISKLDQLQPKHSRTVDGVLYLPGVVGLNNIKANDYCNVVL HALSHVGPLRDYFLQKQSYAHVVRPPGDSVFTLVQRFGELMRKMWNPRNF KSHVSPHEMLQAVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKHP NSSILYKIFLGEMKIYTRKMPPVELDDAAKAQLLATEEYKDQVEDKNFIY LTCDLPPPPLFTDEFRENIIPQVNLYQLLSKFNGTAEKEYKTYKANFMKR FEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKHVDFGDILGMRQRD KDVKDTKYNLVANIVHDGDPKKGTYRAHILHKANGQWYEMQDLHVTEILP QMITLTESYIQIYERCPNSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7288-PA | 494 | CG7288-PA | 1..494 | 27..520 | 2641 | 100 | Plus |
Ubpy-PB | 367 | CG5798-PB | 32..361 | 183..517 | 180 | 22 | Plus |
Ubpy-PA | 896 | CG5798-PA | 561..890 | 183..517 | 180 | 22 | Plus |
Translation from 79 to 1563
> LD38070.pep MAQTQAPAAKRMKLEKTPANPVEEDETPSVFNPKYRVCPYLDTINRNLLD FDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHHVFLNL HTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVD GVLYLPGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVVRPP GDSVFTLVQRFGELMRKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQ GDPIDFLSWFLNTLHRALKGNKHPNSSILYKIFLGEMKIYTRKMPPVELD DAAKAQLLATEEYKDQVEDKNFIYLTCDLPPPPLFTDEFRENIIPQVNLY QLLSKFNGTAEKEYKTYKANFMKRFEITRLPQFIILYIKRFTKNTFFLEK NPTIVNFPIKHVDFGDILGMRQRDKDVKDTKYNLVANIVHDGDPKKGTYR AHILHKANGQWYEMQDLHVTEILPQMITLTESYIQIYERCPNSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19056-PA | 494 | GF19056-PA | 1..494 | 1..494 | 2512 | 93.1 | Plus |
Dana\GF13485-PA | 981 | GF13485-PA | 383..532 | 345..489 | 155 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19194-PA | 494 | GG19194-PA | 1..494 | 1..494 | 2580 | 96.6 | Plus |
Dere\GG24410-PA | 895 | GG24410-PA | 560..889 | 157..491 | 169 | 22 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17820-PA | 491 | GH17820-PA | 6..489 | 8..491 | 2421 | 91.9 | Plus |
Dgri\GH19806-PA | 920 | GH19806-PA | 337..486 | 345..489 | 161 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Usp39-PA | 494 | CG7288-PA | 1..494 | 1..494 | 2641 | 100 | Plus |
Usp8-PB | 367 | CG5798-PB | 32..361 | 157..491 | 180 | 22 | Plus |
Usp8-PA | 896 | CG5798-PA | 561..890 | 157..491 | 180 | 22 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21733-PA | 492 | GI21733-PA | 1..492 | 1..493 | 2453 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21350-PA | 300 | GL21350-PA | 1..300 | 196..494 | 1400 | 88 | Plus |
Dper\GL21349-PA | 170 | GL21349-PA | 1..151 | 1..151 | 729 | 88.7 | Plus |
Dper\GL12603-PA | 901 | GL12603-PA | 561..890 | 157..491 | 180 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23380-PA | 494 | GA23380-PA | 1..494 | 1..494 | 2456 | 91.5 | Plus |
Dpse\GA19137-PA | 901 | GA19137-PA | 561..890 | 157..491 | 179 | 22.7 | Plus |
Dpse\GA19137-PB | 328 | GA19137-PB | 2..317 | 171..491 | 161 | 22.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22925-PA | 494 | GM22925-PA | 1..494 | 1..494 | 2633 | 98.4 | Plus |
Dsec\GM15069-PA | 896 | GM15069-PA | 561..890 | 157..491 | 170 | 22 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24862-PA | 484 | GD24862-PA | 1..484 | 1..494 | 2564 | 96.6 | Plus |
Dsim\GD19401-PA | 896 | GD19401-PA | 561..890 | 157..491 | 170 | 22 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19115-PA | 493 | GJ19115-PA | 1..489 | 1..489 | 2419 | 91.2 | Plus |