BDGP Sequence Production Resources |
Search the DGRC for LD38109
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 381 |
Well: | 9 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8147-RA |
Protein status: | LD38109.pep: gold |
Preliminary Size: | 2002 |
Sequenced Size: | 1866 |
Gene | Date | Evidence |
---|---|---|
CG8147 | 2001-01-01 | Release 2 assignment |
CG8147 | 2001-09-19 | Blastp of sequenced clone |
CG8147 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8147 | 2008-04-29 | Release 5.5 accounting |
CG8147 | 2008-08-15 | Release 5.9 accounting |
CG8147 | 2008-12-18 | 5.12 accounting |
1866 bp (1866 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058670
> LD38109.complete AAACGTGCTGGGCAGCGTACAGCCAGCTCGTAAACTGAGAAACTCTAAAA CTCAGAAGAAAGTATAGAAAAATGAGGCTGCAGCTCTTCTTTTTTCTCGG CCTGAGTGTTCTAGTCAGTGGAGGAGAATCCTCACACGATGCCGAGAGGC GAATGCATCCGGTGTTCTCGCTTATGGGAACCGGATCGAATCCAATCGGA GGAGGTCGATACAAGCGAGCCATGCCCCAGATCGTTTTTGATGCCGTAAG ATCAGAGGAGCGGTACGCCGAGTACTGGCAGGGTTTGGCGGCCCAAACAC TGGATCAGCAGCTGGAGAGTAAGCTGCGATTGAACACCCAGCTGGCCAGG AATGTGATGCTCTTCATTGGCGACGGCATGTCCATACCGACAATCACGGC GGGTCGCGTTTACTTGGGCGGCGAGGAGAAGCAGTTCGCCTTCGAGCAAT TCCCGTATGTGGGTCTCAGCAAGACCTACTGTGCCAATATGCAGGTGGCC GACTCCGCCTGCACCGCCACCGCCTATTTGGGTGGTGTCAAGGCCAACTA TGGCACGATCGGAGTAAGTGCAGCGGTGCAGTTCAAGGATTGCCAGGCGC AGGCACAAGCCGCCCACCATGTCTCCTCCATTGCGGCCTGGGCGCAGAAG CAGGGAATGGCCACCGGACTGGTTACCACAACCTCCGTAACACATGCCTC ACCAGCTGGAGTGTACGCCCACCTGGCCAACCGGAACTGGGAGAACGACG CCGAAGTGGTGGGAGACAATGGTGACCCCGATCTGTGTCCGGACGCAGCT GCCCAGCTGATAAACAGTCCGGTGGGTCAGAAACTTAATGTGATAATGGG CGGAGGTCGCGAGAATTTCCTGCCCAAAGGCGTGACTGATTCCAGTGGAG CGCCTGGTCGCCGTTTGGATGGCCGCAATCTCATCGACGAGTGGAAGAAC CAGCACACGAACAGTGCTCAATATGTGGAGAATCGCAGGGAGCTGCTCAA CCTATCCAATCACACTTCACGAGTACTGGGCTTGTTTGCCCCCTACCACA TGGCCTACCATCTGGATGCTAGTCCAGCAGAGCAACCAACGCTGGAGGAG ATGGTCCAGTCGGCCATGGAAATCTTGGAGCGCCAGAGTGCCGGACGCGG TTACTTCCTTTTCGTGGAGGGCGGTCGGATCGATCATGGTCACCACGACA CCTTGGCTTTGAGGGCCATCGATGAAACGGCGGAGTTCGACAAAGCGGTG CGATTTGCCAGGAGTCACACGAGTACGGACGACACTTTAATAGTGGTCAG TTCGGATCACTCGCACACCATGTCGCTGGCGGGCTATTCCAGCAGAAAGA ACGATATCTTCGGCATCAATGACGGACAGCTGGCGGCGGATGATCTTCCA TATGCCACTCTGAGCTATGCCAATGGACCGGGCTATGATAGTAACTACCT CAGGGAAGGCGGCGCTGTGCGGAGGAAAAATCTGAGAGCCATCAATATGA AGAACAAGGACTTCATGTTCCCCAGCACAGTTCCCTTGGAATCGGAAACG CACGGTGGCGATGATGTGGCCGTTTTTGCTAGTGGACCGTATGCCCAGCT TTTCACCGGAGTTTTCGAGCAGCATTTCATACCTCACGCCCTTGGTTACG CCTCTTGCCTCAGTGATCGTAACATGTGCGTGGATGGGGGCGTGGCACGG AGACCACGCTGAAACTTGGCGGGGATCAAAGGTTAAGTGAAGCACAATGA GTCTAAGCGACAAACGTATTATTCTCGTTTAAGAGAGAAGCCACTAGAAG ATAAGCAATCGTTTAAGGGGGATACTAAAATAAATAATTGAAATCTAAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5320850..5322571 | 125..1846 | 8490 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 5320665..5320790 | 1..126 | 630 | 100 | Plus |
chr2R | 21145070 | chr2R | 5450012..5450101 | 470..559 | 225 | 83.3 | Plus |
chr2R | 21145070 | chr2R | 18096743..18096849 | 578..472 | 220 | 80.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 9495002..9496730 | 125..1853 | 8645 | 100 | Plus |
3R | 32079331 | 3R | 9494817..9494942 | 1..126 | 630 | 100 | Plus |
2R | 25286936 | 2R | 9562517..9562606 | 470..559 | 225 | 83.3 | Plus |
2R | 25286936 | 2R | 22210152..22210258 | 578..472 | 220 | 80.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9235833..9237561 | 125..1853 | 8645 | 100 | Plus |
3R | 31820162 | 3R | 9235648..9235773 | 1..126 | 630 | 100 | Plus |
2R | 25260384 | 2R | 9563738..9563805 | 492..559 | 220 | 88.2 | Plus |
2R | 25260384 | 2R | 22211351..22211457 | 578..472 | 220 | 80.3 | Minus |
3R | 31820162 | 3R | 20747142..20747232 | 759..669 | 155 | 78 | Minus |
3R | 31820162 | 3R | 20747366..20747406 | 535..495 | 145 | 90.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5320665..5320790 | 1..126 | 100 | -> | Plus |
chr3R | 5320852..5322571 | 127..1846 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8147-RB | 1..1641 | 72..1712 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8147-RB | 1..1641 | 72..1712 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8147-RA | 1..1641 | 72..1712 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8147-RB | 1..1641 | 72..1712 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8147-RA | 1..1641 | 72..1712 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8147-RB | 1..1846 | 1..1846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8147-RB | 1..1846 | 1..1846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8147-RA | 17..1862 | 1..1846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8147-RB | 1..1846 | 1..1846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8147-RA | 17..1862 | 1..1846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9494817..9494942 | 1..126 | 100 | -> | Plus |
3R | 9495004..9496723 | 127..1846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9494817..9494942 | 1..126 | 100 | -> | Plus |
3R | 9495004..9496723 | 127..1846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9494817..9494942 | 1..126 | 100 | -> | Plus |
3R | 9495004..9496723 | 127..1846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5320539..5320664 | 1..126 | 100 | -> | Plus |
arm_3R | 5320726..5322445 | 127..1846 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9235835..9237554 | 127..1846 | 100 | Plus | |
3R | 9235648..9235773 | 1..126 | 100 | -> | Plus |
Translation from 71 to 1711
> LD38109.hyp MRLQLFFFLGLSVLVSGGESSHDAERRMHPVFSLMGTGSNPIGGGRYKRA MPQIVFDAVRSEERYAEYWQGLAAQTLDQQLESKLRLNTQLARNVMLFIG DGMSIPTITAGRVYLGGEEKQFAFEQFPYVGLSKTYCANMQVADSACTAT AYLGGVKANYGTIGVSAAVQFKDCQAQAQAAHHVSSIAAWAQKQGMATGL VTTTSVTHASPAGVYAHLANRNWENDAEVVGDNGDPDLCPDAAAQLINSP VGQKLNVIMGGGRENFLPKGVTDSSGAPGRRLDGRNLIDEWKNQHTNSAQ YVENRRELLNLSNHTSRVLGLFAPYHMAYHLDASPAEQPTLEEMVQSAME ILERQSAGRGYFLFVEGGRIDHGHHDTLALRAIDETAEFDKAVRFARSHT STDDTLIVVSSDHSHTMSLAGYSSRKNDIFGINDGQLAADDLPYATLSYA NGPGYDSNYLREGGAVRRKNLRAINMKNKDFMFPSTVPLESETHGGDDVA VFASGPYAQLFTGVFEQHFIPHALGYASCLSDRNMCVDGGVARRPR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8147-PA | 546 | CG8147-PA | 1..546 | 1..546 | 2852 | 100 | Plus |
CG5656-PA | 523 | CG5656-PA | 35..506 | 61..530 | 1206 | 51.2 | Plus |
CG5656-PB | 530 | CG5656-PB | 35..513 | 61..530 | 1189 | 50.4 | Plus |
CG1809-PA | 515 | CG1809-PA | 1..509 | 1..528 | 1187 | 49.4 | Plus |
CG5150-PB | 517 | CG5150-PB | 46..511 | 61..532 | 1118 | 50 | Plus |
Translation from 71 to 1711
> LD38109.pep MRLQLFFFLGLSVLVSGGESSHDAERRMHPVFSLMGTGSNPIGGGRYKRA MPQIVFDAVRSEERYAEYWQGLAAQTLDQQLESKLRLNTQLARNVMLFIG DGMSIPTITAGRVYLGGEEKQFAFEQFPYVGLSKTYCANMQVADSACTAT AYLGGVKANYGTIGVSAAVQFKDCQAQAQAAHHVSSIAAWAQKQGMATGL VTTTSVTHASPAGVYAHLANRNWENDAEVVGDNGDPDLCPDAAAQLINSP VGQKLNVIMGGGRENFLPKGVTDSSGAPGRRLDGRNLIDEWKNQHTNSAQ YVENRRELLNLSNHTSRVLGLFAPYHMAYHLDASPAEQPTLEEMVQSAME ILERQSAGRGYFLFVEGGRIDHGHHDTLALRAIDETAEFDKAVRFARSHT STDDTLIVVSSDHSHTMSLAGYSSRKNDIFGINDGQLAADDLPYATLSYA NGPGYDSNYLREGGAVRRKNLRAINMKNKDFMFPSTVPLESETHGGDDVA VFASGPYAQLFTGVFEQHFIPHALGYASCLSDRNMCVDGGVARRPR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17216-PA | 543 | GF17216-PA | 4..543 | 2..546 | 2593 | 86.6 | Plus |
Dana\GF23560-PA | 523 | GF23560-PA | 35..506 | 61..530 | 1245 | 51.8 | Plus |
Dana\GF12475-PA | 516 | GF12475-PA | 43..510 | 62..528 | 1169 | 51.2 | Plus |
Dana\GF10455-PA | 525 | GF10455-PA | 15..515 | 31..530 | 1133 | 46.5 | Plus |
Dana\GF23984-PA | 517 | GF23984-PA | 2..511 | 1..532 | 1126 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16809-PA | 546 | GG16809-PA | 1..546 | 1..546 | 2839 | 95.2 | Plus |
Dere\GG13235-PA | 529 | GG13235-PA | 36..506 | 62..530 | 1244 | 51.9 | Plus |
Dere\GG24085-PA | 515 | GG24085-PA | 1..511 | 1..530 | 1223 | 48.9 | Plus |
Dere\GG15276-PA | 517 | GG15276-PA | 2..511 | 3..532 | 1139 | 45.6 | Plus |
Dere\GG14123-PA | 524 | GG14123-PA | 7..513 | 5..530 | 1114 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18436-PA | 542 | GH18436-PA | 1..542 | 1..546 | 2245 | 76.1 | Plus |
Dgri\GH15376-PA | 523 | GH15376-PA | 32..503 | 60..530 | 1253 | 52.1 | Plus |
Dgri\GH15197-PA | 525 | GH15197-PA | 21..525 | 11..538 | 1167 | 48.1 | Plus |
Dgri\GH19931-PA | 524 | GH19931-PA | 46..516 | 62..530 | 1161 | 51.2 | Plus |
Dgri\GH16243-PA | 525 | GH16243-PA | 49..514 | 61..530 | 1141 | 48.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
phu-PA | 546 | CG8147-PA | 1..546 | 1..546 | 2852 | 100 | Plus |
Alp1-PA | 523 | CG5656-PA | 35..506 | 61..530 | 1206 | 51.2 | Plus |
Alp1-PB | 530 | CG5656-PB | 35..513 | 61..530 | 1189 | 50.4 | Plus |
Alp6-PA | 515 | CG1809-PA | 1..509 | 1..528 | 1187 | 49.4 | Plus |
Alp9-PB | 517 | CG5150-PB | 46..511 | 61..532 | 1118 | 50 | Plus |
Alp9-PA | 517 | CG5150-PA | 46..511 | 61..532 | 1118 | 50 | Plus |
Alp10-PA | 524 | CG10592-PA | 10..511 | 8..528 | 1095 | 45.4 | Plus |
Alp5-PA | 522 | CG10827-PA | 51..521 | 56..536 | 1080 | 49 | Plus |
Alp8-PB | 533 | CG3264-PB | 27..531 | 26..536 | 1045 | 43.1 | Plus |
Alp8-PA | 533 | CG3264-PA | 27..531 | 26..536 | 1045 | 43.1 | Plus |
Alp2-PA | 538 | CG3290-PA | 59..535 | 62..540 | 1031 | 45.3 | Plus |
Alp7-PA | 543 | CG3292-PA | 64..534 | 62..532 | 986 | 43.2 | Plus |
Alp4-PA | 596 | CG1462-PA | 43..540 | 56..530 | 867 | 39.3 | Plus |
Alp11-PA | 483 | CG8105-PA | 34..468 | 61..532 | 841 | 40.3 | Plus |
Alp4-PB | 502 | CG1462-PB | 1..446 | 103..530 | 797 | 40.3 | Plus |
Alp12-PE | 596 | CG16771-PE | 127..575 | 86..527 | 789 | 40.5 | Plus |
Alp12-PD | 596 | CG16771-PD | 127..575 | 86..527 | 789 | 40.5 | Plus |
Alp12-PC | 596 | CG16771-PC | 127..575 | 86..527 | 789 | 40.5 | Plus |
Alp12-PB | 596 | CG16771-PB | 127..575 | 86..527 | 789 | 40.5 | Plus |
Alp12-PA | 596 | CG16771-PA | 127..575 | 86..527 | 789 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24012-PA | 547 | GI24012-PA | 1..543 | 1..543 | 2215 | 75.7 | Plus |
Dmoj\GI12135-PA | 526 | GI12135-PA | 33..526 | 23..538 | 1190 | 49.4 | Plus |
Dmoj\GI12980-PA | 503 | GI12980-PA | 13..486 | 60..530 | 1185 | 50 | Plus |
Dmoj\GI19888-PA | 524 | GI19888-PA | 30..516 | 44..530 | 1167 | 48.9 | Plus |
Dmoj\GI13179-PA | 525 | GI13179-PA | 51..515 | 62..530 | 1130 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13610-PA | 392 | GL13610-PA | 2..392 | 1..394 | 1735 | 81.9 | Plus |
Dper\GL17170-PA | 520 | GL17170-PA | 6..512 | 5..530 | 1162 | 47.6 | Plus |
Dper\GL12007-PA | 538 | GL12007-PA | 41..527 | 46..530 | 1111 | 48 | Plus |
Dper\GL23248-PA | 525 | GL23248-PA | 49..523 | 52..536 | 1074 | 46.5 | Plus |
Dper\GL16938-PA | 533 | GL16938-PA | 57..524 | 62..532 | 1045 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20850-PA | 543 | GA20850-PA | 1..543 | 1..546 | 2512 | 84.3 | Plus |
Dpse\GA24639-PA | 521 | GA24639-PA | 23..504 | 52..530 | 1207 | 50.5 | Plus |
Dpse\GA18693-PA | 522 | GA18693-PA | 1..512 | 1..532 | 1174 | 47 | Plus |
Dpse\GA14786-PA | 520 | GA14786-PA | 6..512 | 5..530 | 1165 | 47.8 | Plus |
Dpse\GA10422-PA | 537 | GA10422-PA | 41..527 | 46..530 | 1110 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23808-PA | 546 | GM23808-PA | 1..546 | 1..546 | 2909 | 98.7 | Plus |
Dsec\GM22140-PA | 523 | GM22140-PA | 35..506 | 61..530 | 1236 | 51.4 | Plus |
Dsec\GM21133-PA | 515 | GM21133-PA | 1..509 | 1..528 | 1227 | 49.3 | Plus |
Dsec\GM14710-PA | 517 | GM14710-PA | 2..511 | 1..532 | 1149 | 46.5 | Plus |
Dsec\GM13909-PA | 524 | GM13909-PA | 7..513 | 5..530 | 1112 | 44.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18617-PA | 546 | GD18617-PA | 1..546 | 1..546 | 2923 | 99.3 | Plus |
Dsim\GD13186-PA | 524 | GD13186-PA | 7..513 | 5..530 | 1112 | 44.9 | Plus |
Dsim\GD13892-PA | 511 | GD13892-PA | 2..505 | 3..532 | 1102 | 45.2 | Plus |
Dsim\GD25137-PA | 533 | GD25137-PA | 27..531 | 26..536 | 1036 | 43.2 | Plus |
Dsim\GD20021-PA | 521 | GD20021-PA | 17..520 | 29..536 | 1033 | 46.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23643-PA | 545 | GJ23643-PA | 1..544 | 1..545 | 2240 | 75.1 | Plus |
Dvir\GJ13123-PA | 521 | GJ13123-PA | 40..504 | 67..530 | 1215 | 51.8 | Plus |
Dvir\GJ13410-PA | 526 | GJ13410-PA | 56..526 | 63..538 | 1188 | 51.8 | Plus |
Dvir\GJ15058-PA | 524 | GJ15058-PA | 35..516 | 49..530 | 1149 | 48.8 | Plus |
Dvir\GJ10462-PA | 520 | GJ10462-PA | 50..517 | 59..536 | 1132 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10963-PA | 547 | GK10963-PA | 26..547 | 21..546 | 2356 | 81.3 | Plus |
Dwil\GK16996-PA | 534 | GK16996-PA | 49..517 | 64..530 | 1228 | 52.1 | Plus |
Dwil\GK17300-PA | 524 | GK17300-PA | 31..524 | 23..538 | 1156 | 47.7 | Plus |
Dwil\GK16879-PA | 530 | GK16879-PA | 46..518 | 58..528 | 1104 | 48.5 | Plus |
Dwil\GK21822-PA | 520 | GK21822-PA | 20..512 | 42..530 | 1082 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25953-PA | 548 | GE25953-PA | 1..548 | 1..546 | 2822 | 94.9 | Plus |
Dyak\GE22974-PA | 523 | GE22974-PA | 35..506 | 61..530 | 1252 | 52.2 | Plus |
Dyak\GE22333-PA | 523 | GE22333-PA | 35..506 | 61..530 | 1246 | 52 | Plus |
Dyak\GE19286-PA | 515 | GE19286-PA | 5..511 | 5..530 | 1203 | 48.5 | Plus |
Dyak\GE21498-PA | 517 | GE21498-PA | 2..511 | 3..532 | 1150 | 46 | Plus |