BDGP Sequence Production Resources |
Search the DGRC for LD38226
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 382 |
Well: | 26 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8892-RB |
Protein status: | LD38226.pep: gold |
Preliminary Size: | 2018 |
Sequenced Size: | 1726 |
Gene | Date | Evidence |
---|---|---|
CG8892 | 2001-07-04 | Blastp of sequenced clone |
CG8892 | 2008-04-29 | Release 5.5 accounting |
1726 bp (1726 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051893
> LD38226.complete TTCGGTCGTTTGCTCGCTATTTCCGAAACTCGCCATTTAACTATCAAGAA ACAACCTCCAGAGCAACGTCATGTCCACTACCGAGGCGCCGGATGCGCTG GTGGAGCAGGTCCGCGAGGTGACCGCTTGCTCCATGGACGAGGCCAAATA TTACTTGTCTGCCTGTGCCAACGATGTGTCCGCCGCAGTGGCTCTGTTTT TCGAACAGGCAGCCTCCACATCCACGCCATCGGGCTCCAGTGCCGGTGCT GCGGCTGAATCGCTACCCGTTTTGGACGACGAGGATGAGGTAAGGGCGCC AATTGCCCCGGTCCGTGAGCAATTGATCCTGCCCGAGGACGACAATTTTT TTGCGTCGGGGAGCAGTAGCCGGCTGTCGCGTGTGACGCAGCGCGTCAAG GTTCATCCCCTGCGGGACTTTGCCCGCGAGGGCGCTCTAATGGAGGAGCA GCTGCAGGCCACTGGCGTCTATGCCGATCCCAATCGAATCCGTCGCGGAC GGGCCGCCCAGATGGTGGTGGCCGGTCAGGCCATGGCACTTAACAGACGG TCCACAACGGACACGGCAACCAGCACATCCCGCCTCGGAGACCTATTCCG CCCGCCAACGGACATACTCTACTCCGGATCACTAACCGCTGCCAGGGAGT TTGCCACCAAGCGTCAGCGCTGGTTGCTGGTCAACGTGCAGGACGAAAAC TTTCAGTCGCAGACTTTGAACCGCGATGTCTGGTCGGACAAGGAGCTTAA GAAACTGATACGTCGCCAGTTCACCTTCTGGCAGGTGGACAACGACACCT CGGAAGGACGCCGCTTTGTGGCCTTCTACCACTGCGCCACCCTGCCTTAC ATATGCGTGATCGATCCCCGTACTGGTGAGGAAGTGTGGCGCAGCGCAGA GCCGAAGCTGGAGAATATTCTTCCCGATTTGAGGCAGTTCTTGAAGGAGC ACCGTGACTTTATTCAGGAGGATGCACCAGGCACCTCGAAGCGTTCGGCC ACGTACATCGATGATGACGAGGTGCCCGATCCGGAGGCCTCGTGCTCCTC GACAGCCAGTTCGAAGGAAATGCCCAAGAAACGTGCCAAGGTTCTGGAGC TAACCGAAGAGGAGCAGCTTGAGTTGGCCATCAAGAATTCCATAAACGAG AACGGTGGTGGCGGAGGCGAAGGCAACCAGAAAAACGATAGTCCCGATGG AGCCAGCGATAATGAGAGCCTTGAGGAGTTCGATGATGAGGAGCTCAAGG GTGTGGCCGCCGCCTCTTTCGAGAATCACTTGGGCGAGGCCAAGACTGAA TTGACTGCCCTTAAACTGCGCCTGCTCAACGCCGCCGGAACAGATGAGAT GGTCCAGCTGCGCTGGCCCTCGGACACCAAACTGCAAACTTTGCGGCTGT ACATCAGCCAGACGCACAAGCACATCCCTCAGGACGGCTACAAGCTCATT TGCGCCTTCCCGCGAAAATTCCTGGAGGCGGAGCATAACGATAGCTCCCT GAAGGAACTCGGCCTGCATCCATCGGCAAATCTGCATCTCACAAACGCGG ACGATCAGTAGAAGTTTTCATGTGCATCTTATATTTATTTGCAAATTTTG TCATCCCAAGAAAACCATTATCGTCCCAAAAAAAAAAAAAAACTTTCCAT TTGAATTACATTTTTGTCCTAAAAATAAGTTATGTTGAATAAATCAACTA GAAATGCTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 4978637..4980344 | 1708..1 | 8540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 4979536..4981244 | 1709..1 | 8545 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 4979536..4981244 | 1709..1 | 8545 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 4978637..4980344 | 1..1708 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8892-RB | 1..1491 | 71..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8892-RB | 1..1491 | 71..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8892-RB | 1..1491 | 71..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8892-RB | 1..1491 | 71..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8892-RB | 1..1491 | 71..1561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8892-RB | 132..1839 | 1..1708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8892-RB | 132..1839 | 1..1708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8892-RB | 68..1775 | 1..1708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8892-RB | 132..1839 | 1..1708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8892-RB | 68..1775 | 1..1708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4979537..4981244 | 1..1708 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4979537..4981244 | 1..1708 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4979537..4981244 | 1..1708 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 4979537..4981244 | 1..1708 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4979537..4981244 | 1..1708 | 100 | Minus |
Translation from 70 to 1560
> LD38226.hyp MSTTEAPDALVEQVREVTACSMDEAKYYLSACANDVSAAVALFFEQAAST STPSGSSAGAAAESLPVLDDEDEVRAPIAPVREQLILPEDDNFFASGSSS RLSRVTQRVKVHPLRDFAREGALMEEQLQATGVYADPNRIRRGRAAQMVV AGQAMALNRRSTTDTATSTSRLGDLFRPPTDILYSGSLTAAREFATKRQR WLLVNVQDENFQSQTLNRDVWSDKELKKLIRRQFTFWQVDNDTSEGRRFV AFYHCATLPYICVIDPRTGEEVWRSAEPKLENILPDLRQFLKEHRDFIQE DAPGTSKRSATYIDDDEVPDPEASCSSTASSKEMPKKRAKVLELTEEEQL ELAIKNSINENGGGGGEGNQKNDSPDGASDNESLEEFDDEELKGVAAASF ENHLGEAKTELTALKLRLLNAAGTDEMVQLRWPSDTKLQTLRLYISQTHK HIPQDGYKLICAFPRKFLEAEHNDSSLKELGLHPSANLHLTNADDQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8892-PD | 496 | CG8892-PD | 1..496 | 1..496 | 2542 | 100 | Plus |
CG8892-PE | 496 | CG8892-PE | 1..496 | 1..496 | 2542 | 100 | Plus |
CG8892-PB | 496 | CG8892-PB | 1..496 | 1..496 | 2542 | 100 | Plus |
CG8892-PC | 496 | CG8892-PC | 1..496 | 1..496 | 2542 | 100 | Plus |
Translation from 70 to 1560
> LD38226.pep MSTTEAPDALVEQVREVTACSMDEAKYYLSACANDVSAAVALFFEQAAST STPSGSSAGAAAESLPVLDDEDEVRAPIAPVREQLILPEDDNFFASGSSS RLSRVTQRVKVHPLRDFAREGALMEEQLQATGVYADPNRIRRGRAAQMVV AGQAMALNRRSTTDTATSTSRLGDLFRPPTDILYSGSLTAAREFATKRQR WLLVNVQDENFQSQTLNRDVWSDKELKKLIRRQFTFWQVDNDTSEGRRFV AFYHCATLPYICVIDPRTGEEVWRSAEPKLENILPDLRQFLKEHRDFIQE DAPGTSKRSATYIDDDEVPDPEASCSSTASSKEMPKKRAKVLELTEEEQL ELAIKNSINENGGGGGEGNQKNDSPDGASDNESLEEFDDEELKGVAAASF ENHLGEAKTELTALKLRLLNAAGTDEMVQLRWPSDTKLQTLRLYISQTHK HIPQDGYKLICAFPRKFLEAEHNDSSLKELGLHPSANLHLTNADDQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14163-PA | 483 | GF14163-PA | 1..480 | 1..491 | 2054 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24329-PA | 479 | GG24329-PA | 1..479 | 1..495 | 2177 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13802-PA | 499 | GH13802-PA | 1..496 | 1..491 | 1473 | 68.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8892-PD | 496 | CG8892-PD | 1..496 | 1..496 | 2542 | 100 | Plus |
CG8892-PE | 496 | CG8892-PE | 1..496 | 1..496 | 2542 | 100 | Plus |
CG8892-PB | 496 | CG8892-PB | 1..496 | 1..496 | 2542 | 100 | Plus |
CG8892-PC | 496 | CG8892-PC | 1..496 | 1..496 | 2542 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18052-PA | 493 | GI18052-PA | 10..490 | 8..491 | 1684 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26486-PA | 500 | GL26486-PA | 4..497 | 3..491 | 1778 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21396-PA | 500 | GA21396-PA | 4..497 | 3..491 | 1778 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18050-PA | 496 | GM18050-PA | 1..496 | 1..496 | 2565 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22670-PA | 496 | GD22670-PA | 1..496 | 1..496 | 2569 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22424-PA | 482 | GJ22424-PA | 1..479 | 1..491 | 1660 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24459-PA | 485 | GK24459-PA | 1..482 | 1..491 | 1502 | 65.8 | Plus |
Dwil\GK15701-PA | 332 | GK15701-PA | 51..201 | 145..299 | 325 | 43.3 | Plus |
Dwil\GK15701-PA | 332 | GK15701-PA | 227..317 | 401..491 | 285 | 59.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18709-PA | 501 | GE18709-PA | 1..501 | 1..496 | 2241 | 94.2 | Plus |