BDGP Sequence Production Resources |
Search the DGRC for LD38241
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 382 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2921-RA |
Protein status: | LD38241.pep: gold |
Preliminary Size: | 1670 |
Sequenced Size: | 1569 |
Gene | Date | Evidence |
---|---|---|
CG2921 | 2001-01-01 | Release 2 assignment |
CG2921 | 2001-09-19 | Blastp of sequenced clone |
CG2921 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2921 | 2008-04-29 | Release 5.5 accounting |
CG2921 | 2008-08-15 | Release 5.9 accounting |
CG2921 | 2008-12-18 | 5.12 accounting |
1569 bp (1569 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058671
> LD38241.complete CTAAAATGCACCAGTAAACGCACAAAAATCACAGACAAAAAAAAAAAGAA AAGATGGAATCCTTATCGAAGGACCCTTCCTCGGAAGGCGAACTGCCCGA GGACGAAGGCAAAACGGACTCGGAACCCAGCAAAATATCGCGACTGTTGC GAACGGAATTCGATGCCAAATACCAGATCGTAAACCTGCAGACTCCTCTC AATGCCTTTATGTCGGGCCATTACAAGCAGAGCTTTGCCTTCTTCACACT CCGGAGTCGGCTGCCCGTGATCCTGACCAACGTGATAGATACGCTGACAC GGGACAAATCCGAGCTGGTAGCCCAATTCGCCTCAAATGAATTTTCACAG GCTGCCCGCGAGGAGCTAAAGATCATTATTGGATTGATCTCCAGGCTAAA GTACGAGCTGCAAACGGACAAATCGTTTCAAAACTTTACTGGCGAAGAAC CCGATCGAGATGTTTGGAACAACTTTATCAGCAACCTGCCCGATGGCGAA CGCAGCTTCTACAAAGCCAGCTCCCTCCATGCCGAGTGCTATCTGCACCG CAAACTCCACTCCTTTCTGGAAAACAGCGTATTTCTGAAGTCATACGATT TCTTTGCCAAAGTCAAGGAGCAGGCGCTAACGGATAGCATTGATGATATA CTGGCCCTGACCAAGTACACACGACGATCAGAGAACAGCGTGGAGGTGTT CGACGAGCTTCTGAGGATCAACATGTGGAGCAACTGCAATGATGTGGCGA CCGACACGGATACAGTAAAGCAATCGAACCGCCAGGTGCTGGAGAAAGTG GCAAACACCGATGAGCGCGTACTGGTTAACCAGGCAGCGGAGATTTGGAG GTGCTTGGAAAACCCTAAACTGAAGAAGCATAAGCAGGTGGACTTTATAC TGGACAATGCAGGCTACGAACTCTTTAGCGACTTTATACTGGCTGAGTTC ATGATTGAGAAGGGACTGGCCGACAAGGTGCGGTTCCATGTGAAGGCCCA CCCTTGGTTTGTCACCGATGTGACGGAGCGGGACTTCAAGTGGACGCTGG AGTACTTGAGTGAGCATGCGGACTACATTATAAGTCTGATAGGAAAGAAG TTCCTACAATTCATCGATGAGGGAAAGTTCGAACTGGCGCCAATCTCGCA TTTCTGGACATCACCACATTCGTTTTACAGCATGGCGCAAATGGATCCAG ATTTGTATAGTTCCCTGCAGCTATCCAAGCTGGTGGTCTTCAAGGGAGAG CTCAACTATCGCAAGCTGCTGCAGGACGTCTGCTGGGACCCCACCCAGGA ACTCAGCACCTGCCTCCGTGGCTTCCTTCCCAGCAACATTTGTGTGCTGC GGCGGGTCAAGAGCGAAGTTATCTCCGGCCTGCCCGAGGGCGTTGGCCAG GCGCTGAGTGTGAAGGATCCGCGCTGGATGGTCTCGGGCAGTTATGGGGT CATTCAGTTCGTTGACGGAGCTCGTGAATTTGGCTATTAATCTTGTACAG GCTGGTCAGCTTAAATTATTGGTAATAAATAGTCGTTACATATCTAGAAA AAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2921-RA | 1800 | CG2921-RA | 183..1729 | 1..1549 | 7690 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17960352..17961086 | 1180..446 | 3585 | 99.2 | Minus |
chr2R | 21145070 | chr2R | 17959923..17960292 | 1547..1178 | 1790 | 98.9 | Minus |
chr2R | 21145070 | chr2R | 17961314..17961641 | 330..1 | 1555 | 98.8 | Minus |
chr2R | 21145070 | chr2R | 17961140..17961257 | 447..330 | 590 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 22073967..22074701 | 1180..446 | 3675 | 100 | Minus |
2R | 25286936 | 2R | 22073536..22073907 | 1549..1178 | 1860 | 100 | Minus |
2R | 25286936 | 2R | 22074929..22075256 | 330..1 | 1585 | 99.4 | Minus |
2R | 25286936 | 2R | 22074755..22074872 | 447..330 | 590 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 22075166..22075900 | 1180..446 | 3675 | 100 | Minus |
2R | 25260384 | 2R | 22074735..22075106 | 1549..1178 | 1860 | 100 | Minus |
2R | 25260384 | 2R | 22076128..22076455 | 330..1 | 1595 | 99.3 | Minus |
2R | 25260384 | 2R | 22075954..22076071 | 447..330 | 590 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fw3 | 3132 | Fw3 FW3 3132bp | 2638..2686 | 606..560 | 114 | 73.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17959923..17960289 | 1181..1547 | 98 | <- | Minus |
chr2R | 17960352..17961084 | 448..1180 | 99 | <- | Minus |
chr2R | 17961140..17961256 | 331..447 | 100 | <- | Minus |
chr2R | 17961314..17961641 | 1..330 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2921-RA | 1..1437 | 54..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2921-RA | 1..1437 | 54..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2921-RA | 1..1437 | 54..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2921-RA | 1..1437 | 54..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2921-RA | 82..1626 | 1..1547 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2921-RA | 82..1626 | 1..1547 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2921-RA | 53..1597 | 1..1547 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2921-RA | 82..1626 | 1..1547 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2921-RA | 53..1597 | 1..1547 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22074755..22074871 | 331..447 | 100 | <- | Minus |
2R | 22073538..22073904 | 1181..1547 | 100 | <- | Minus |
2R | 22073967..22074699 | 448..1180 | 100 | <- | Minus |
2R | 22074929..22075256 | 1..330 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22074755..22074871 | 331..447 | 100 | <- | Minus |
2R | 22073538..22073904 | 1181..1547 | 100 | <- | Minus |
2R | 22073967..22074699 | 448..1180 | 100 | <- | Minus |
2R | 22074929..22075256 | 1..330 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22074755..22074871 | 331..447 | 100 | <- | Minus |
2R | 22073538..22073904 | 1181..1547 | 100 | <- | Minus |
2R | 22073967..22074699 | 448..1180 | 100 | <- | Minus |
2R | 22074929..22075256 | 1..330 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17961043..17961409 | 1181..1547 | 100 | <- | Minus |
arm_2R | 17961472..17962204 | 448..1180 | 100 | <- | Minus |
arm_2R | 17962260..17962376 | 331..447 | 100 | <- | Minus |
arm_2R | 17962434..17962761 | 1..330 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22074737..22075103 | 1181..1547 | 100 | <- | Minus |
2R | 22075166..22075898 | 448..1180 | 100 | <- | Minus |
2R | 22075954..22076070 | 331..447 | 100 | <- | Minus |
2R | 22076128..22076455 | 1..330 | 99 | Minus |
Translation from 0 to 1489
> LD38241.hyp LKCTSKRTKITDKKKEKMESLSKDPSSEGELPEDEGKTDSEPSKISRLLR TEFDAKYQIVNLQTPLNAFMSGHYKQSFAFFTLRSRLPVILTNVIDTLTR DKSELVAQFASNEFSQAAREELKIIIGLISRLKYELQTDKSFQNFTGEEP DRDVWNNFISNLPDGERSFYKASSLHAECYLHRKLHSFLENSVFLKSYDF FAKVKEQALTDSIDDILALTKYTRRSENSVEVFDELLRINMWSNCNDVAT DTDTVKQSNRQVLEKVANTDERVLVNQAAEIWRCLENPKLKKHKQVDFIL DNAGYELFSDFILAEFMIEKGLADKVRFHVKAHPWFVTDVTERDFKWTLE YLSEHADYIISLIGKKFLQFIDEGKFELAPISHFWTSPHSFYSMAQMDPD LYSSLQLSKLVVFKGELNYRKLLQDVCWDPTQELSTCLRGFLPSNICVLR RVKSEVISGLPEGVGQALSVKDPRWMVSGSYGVIQFVDGAREFGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2921-PA | 478 | CG2921-PA | 1..478 | 18..495 | 2482 | 100 | Plus |
CG11474-PC | 436 | CG11474-PC | 5..433 | 51..486 | 989 | 42 | Plus |
CG11474-PA | 436 | CG11474-PA | 5..433 | 51..486 | 989 | 42 | Plus |
CG4161-PB | 484 | CG4161-PB | 22..449 | 64..491 | 978 | 44.3 | Plus |
CG4161-PA | 484 | CG4161-PA | 22..449 | 64..491 | 978 | 44.3 | Plus |
Translation from 53 to 1489
> LD38241.pep MESLSKDPSSEGELPEDEGKTDSEPSKISRLLRTEFDAKYQIVNLQTPLN AFMSGHYKQSFAFFTLRSRLPVILTNVIDTLTRDKSELVAQFASNEFSQA AREELKIIIGLISRLKYELQTDKSFQNFTGEEPDRDVWNNFISNLPDGER SFYKASSLHAECYLHRKLHSFLENSVFLKSYDFFAKVKEQALTDSIDDIL ALTKYTRRSENSVEVFDELLRINMWSNCNDVATDTDTVKQSNRQVLEKVA NTDERVLVNQAAEIWRCLENPKLKKHKQVDFILDNAGYELFSDFILAEFM IEKGLADKVRFHVKAHPWFVTDVTERDFKWTLEYLSEHADYIISLIGKKF LQFIDEGKFELAPISHFWTSPHSFYSMAQMDPDLYSSLQLSKLVVFKGEL NYRKLLQDVCWDPTQELSTCLRGFLPSNICVLRRVKSEVISGLPEGVGQA LSVKDPRWMVSGSYGVIQFVDGAREFGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11597-PA | 484 | GF11597-PA | 25..484 | 20..478 | 1957 | 77 | Plus |
Dana\GF11598-PA | 436 | GF11598-PA | 6..434 | 35..470 | 1026 | 42.2 | Plus |
Dana\GF15383-PA | 486 | GF15383-PA | 23..449 | 47..474 | 973 | 42.4 | Plus |
Dana\GF11599-PA | 460 | GF11599-PA | 22..456 | 34..477 | 731 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20722-PA | 478 | GG20722-PA | 1..478 | 1..478 | 2385 | 92.5 | Plus |
Dere\GG20723-PA | 436 | GG20723-PA | 5..434 | 34..470 | 1012 | 42.1 | Plus |
Dere\GG25159-PA | 484 | GG25159-PA | 22..449 | 47..474 | 998 | 45 | Plus |
Dere\GG20724-PA | 463 | GG20724-PA | 15..450 | 23..468 | 767 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21342-PA | 475 | GH21342-PA | 21..475 | 21..478 | 1597 | 61.6 | Plus |
Dgri\GH13756-PA | 458 | GH13756-PA | 9..440 | 42..474 | 963 | 43.2 | Plus |
Dgri\GH21343-PA | 436 | GH21343-PA | 8..434 | 34..470 | 925 | 39.7 | Plus |
Dgri\GH21344-PA | 466 | GH21344-PA | 5..465 | 3..474 | 663 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2921-PA | 478 | CG2921-PA | 1..478 | 1..478 | 2482 | 100 | Plus |
CG11474-PC | 436 | CG11474-PC | 5..433 | 34..469 | 989 | 42 | Plus |
CG11474-PA | 436 | CG11474-PA | 5..433 | 34..469 | 989 | 42 | Plus |
CG4161-PB | 484 | CG4161-PB | 22..449 | 47..474 | 978 | 44.3 | Plus |
CG4161-PA | 484 | CG4161-PA | 22..449 | 47..474 | 978 | 44.3 | Plus |
CG11475-PA | 464 | CG11475-PA | 21..451 | 28..468 | 747 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20758-PA | 473 | GI20758-PA | 2..473 | 7..478 | 1481 | 56.4 | Plus |
Dmoj\GI17896-PA | 460 | GI17896-PA | 13..443 | 42..474 | 1003 | 44.2 | Plus |
Dmoj\GI20759-PA | 437 | GI20759-PA | 8..435 | 34..470 | 936 | 39.8 | Plus |
Dmoj\GI20761-PA | 468 | GI20761-PA | 32..467 | 34..474 | 738 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17494-PA | 488 | GL17494-PA | 10..488 | 12..478 | 1768 | 68.5 | Plus |
Dper\GL26427-PA | 505 | GL26427-PA | 27..455 | 47..474 | 1030 | 44.2 | Plus |
Dper\GL17495-PA | 438 | GL17495-PA | 7..436 | 34..470 | 989 | 39.8 | Plus |
Dper\GL17496-PA | 471 | GL17496-PA | 36..458 | 36..468 | 815 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15520-PA | 480 | GA15520-PA | 10..480 | 12..478 | 1756 | 68.5 | Plus |
Dpse\GA17996-PA | 503 | GA17996-PA | 27..455 | 47..474 | 1026 | 44 | Plus |
Dpse\GA11023-PA | 438 | GA11023-PA | 7..436 | 34..470 | 978 | 39.6 | Plus |
Dpse\GA11024-PA | 471 | GA11024-PA | 36..458 | 36..468 | 813 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15666-PA | 478 | GM15666-PA | 1..478 | 1..478 | 2496 | 97.5 | Plus |
Dsec\GM15668-PA | 436 | GM15668-PA | 5..434 | 34..470 | 1012 | 41.9 | Plus |
Dsec\GM16086-PA | 483 | GM16086-PA | 22..449 | 47..474 | 997 | 44.6 | Plus |
Dsec\GM15669-PA | 464 | GM15669-PA | 19..451 | 26..468 | 761 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25148-PA | 478 | GD25148-PA | 1..478 | 1..478 | 2522 | 98.5 | Plus |
Dsim\GD24006-PA | 483 | GD24006-PA | 22..449 | 47..474 | 1001 | 44.6 | Plus |
Dsim\GD25149-PA | 436 | GD25149-PA | 5..434 | 34..470 | 993 | 41 | Plus |
Dsim\GD25150-PA | 424 | GD25150-PA | 19..411 | 26..468 | 599 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20494-PA | 472 | GJ20494-PA | 6..472 | 12..478 | 1644 | 62.7 | Plus |
Dvir\GJ17401-PA | 463 | GJ17401-PA | 13..444 | 42..474 | 1023 | 44.2 | Plus |
Dvir\GJ20495-PA | 438 | GJ20495-PA | 16..436 | 42..470 | 932 | 39.9 | Plus |
Dvir\GJ20496-PA | 470 | GJ20496-PA | 35..469 | 35..474 | 787 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15628-PA | 479 | GK15628-PA | 29..479 | 27..478 | 1673 | 65.2 | Plus |
Dwil\GK15629-PA | 440 | GK15629-PA | 9..440 | 35..473 | 995 | 39.9 | Plus |
Dwil\GK18252-PA | 503 | GK18252-PA | 21..463 | 41..474 | 973 | 41.5 | Plus |
Dwil\GK15630-PA | 471 | GK15630-PA | 37..470 | 28..474 | 714 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13653-PA | 476 | GE13653-PA | 1..476 | 1..478 | 2400 | 93.7 | Plus |
Dyak\GE13654-PA | 436 | GE13654-PA | 5..434 | 34..470 | 1019 | 41.9 | Plus |
Dyak\GE20990-PA | 484 | GE20990-PA | 22..449 | 47..474 | 994 | 44.6 | Plus |
Dyak\GE13655-PA | 473 | GE13655-PA | 15..450 | 23..468 | 751 | 35.6 | Plus |