BDGP Sequence Production Resources |
Search the DGRC for LD38348
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 383 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | su(f)-RE |
Protein status: | LD38348.pep: gold |
Preliminary Size: | 2727 |
Sequenced Size: | 2609 |
Gene | Date | Evidence |
---|---|---|
su(f) | 2008-04-29 | Release 5.5 accounting |
su(f) | 2008-08-15 | Release 5.9 accounting |
su(f) | 2008-12-18 | 5.12 accounting |
2609 bp (2609 high quality bases) assembled on 2004-10-25
GenBank Submission: BT021384
> LD38348.complete TAAAACCATATATCTTTTTTATTTATAGTTTATAATCAGTGACCGCTGTA CTACACATCCCAAATCTTGGGATTTTAATGGTAAGGCCCGCGATGTGATT GGCGATGACACTATCGCAGTTACATCCAATCAGTCGTCGATATCTAAGCA GCCGCATTGCAACTTCTAAAAGAATTCGGAAAAGCGGCATCCAAGCGTTG CTTTAGGTAATTGCGTAGCGAAAGTTCAACGGAAGAAAGGAACTTTCCCG GGCCAAGGAGCAGCGCAAGCAGGACTCAACGACAATTTGCAAAGACTATT AGCAATGTCTTCGGCCAGAGACCTTATCAAAGTCGACATAGAATGGGGCA TGGAGCGCCTGGTGCGAGCTCAGCAAGTGGTGGAGCTGCGGCCCTATGAC ATCGAGTCCTGGAGTGTCATGATCCGAGAGGCCCAAACGCGGCCAATCCA CGAAGTACGCAGTCTTTACGAGTCGCTAGTTAATGTGTTTCCGACAACCG CTCGGTACTGGAAGCTATACATTGAGATGGAGATGCGCAGCCGGTACTAT GAACGCGTGGAGAAACTTTTTCAACGCTGCCTAGTCAAGATTTTGAACAT CGACCTCTGGAAGCTCTATCTTACCTACGTGAAGGAAACCAAGTCGGGTC TAAGTACTCACAAAGAAAAAATGGCCCAGGCTTATGATTTTGCACTGGAG AAAATCGGCATGGATCTACACTCGTTCAGCATCTGGCAGGATTACATATA CTTTCTGCGGGGCGTTGAAGCAGTGGGCAACTATGCAGAGAACCAAAAGA TCACAGCAGTGCGCCGCGTCTATCAAAAGGCTGTAGTCACACCTATCGTG GGCATCGAGCAGTTGTGGAAGGACTATATCGCATTCGAGCAAAACATAAA CCCGATTATATCAGAGAAGATGAGTCTGGAGCGATCTAAGGATTACATGA ACGCTCGTCGTGTTGCCAAAGAGTTGGAATACCACACAAAGGGTCTCAAT CGCAATCTGCCAGCCGTCCCACCCACACTCACAAAAGAGGAGGTGAAGCA AGTGGAGCTGTGGAAGCGCTTTATCACGTATGAGAAGTCTAATCCCTTGC GCACTGAAGATACGGCCCTAGTAACCCGTCGTGTCATGTTCGCCACGGAG CAATGTTTGCTGGTGCTCACCCACCACCCGGCAGTGTGGCACCAGGCCTC CCAATTCCTGGACACCAGTGCTCGCGTGCTCACCGAAAAAGGCGACGTCC AGGCGGCCAAGATTTTTGCGGACGAGTGTGCTAATATACTGGAACGGTCT ATAAACGGCGTGCTAAACCGAAATGCGTTGCTATATTTTGCCTATGCGGA CTTTGAAGAAGGACGGCTCAAGTACGAGAAGGTGCACACTATGTACAACA AGCTGTTACAGTTGCCAGACATTGATCCCACATTGGTCTATGTTCAGTAC ATGAAGTTCGCCCGTCGTGCTGAGGGGATCAAGTCGGCCCGTAGCATATT TAAGAAAGCTCGGGAGGACGTAAGGTCGCGCTATCACATTTTCGTGGCCG CTGCTTTAATGGAGTATTATTGCTCCAAGGACAAAGAAATTGCGTTCCGC ATCTTCGAGCTGGGATTGAAGCGTTTTGGTGGCAGTCCAGAGTACGTGAT GTGCTACATTGACTACCTGTCCCATCTAAACGAGGACAATAATACGCGCG TCCTGTTTGAACGGGTACTTAGTTCAGGTGGTTTGTCGCCGCACAAGAGT GTTGAGGTCTGGAATCGCTTCCTCGAGTTCGAATCTAATATTGGGGATCT CTCCAGCATCGTTAAGGTCGAACGTCGCCGTAGTGCCGTTTTCGAAAACC TTAAAGAGTATGAGGGCAAGGAGACCGCCCAGCTGGTTGACCGTTACAAA TTTCTGGACCTTTACCCCTGCACCAGCACCGAGCTCAAGTCCATAGGATA TGCTGAGAATGTGGGCATTATACTGAACAAGGTGGGTGGTGGAGCTCAAA GCCAGAACACCGGAGAGGTCGAAACAGATAGCGAGGCAACGCCACCATTG CCACGTCCGGATTTCTCCCAGATGATTCCATTCAAGCCGCGTCCATGTGC TCATCCTGGTGCCCATCCACTTGCAGGTGGTGTATTTCCGCAGCCGCCAG CTCTGGCCGCTTTGTGCGCCACCCTGCCTCCACCGAACTCCTTCCGTGGA CCGTTCGTCAGCGTAGAGCTACTATTCGACATTTTCATGCGTCTCAATCT TCCGGACTCTGCACCGCAACCGAATGGAGACAACGAATTGTCGCCTAAGA TCTTCGATCTGGCCAAGTCGGTTCACTGGATCGTGGATACAAGTACGTAT ACGGGGGTGCAGCACAGTGTTACGGCCGTTCCACCGCGCCGGCGACGACT GCTGCCTGGGGGCGATGATAGTGACGACGAACTGCAGACCGCTGTGCCGC CCTCCCACGATATATATCGCCTGCGTCAGCTAAAGCGTTTCGCCAAGTCT AATTAAGAAACGTTAAAAAAAAACCGATTTTTACTTTTTTCTTTCAATTA ATTTACAAGAAACAAGAAATCCCAATAAAGCAAGCCATATTAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrXHet | 204175 | chrXHet | 78349..78763 | 1435..1849 | 2075 | 100 | Plus |
chrXHet | 204175 | chrXHet | 76267..76607 | 1..341 | 1705 | 100 | Plus |
chrXHet | 204175 | chrXHet | 79735..80067 | 2259..2591 | 1665 | 100 | Plus |
chrXHet | 204175 | chrXHet | 76668..76990 | 341..663 | 1615 | 100 | Plus |
chrXHet | 204175 | chrXHet | 77489..77793 | 940..1244 | 1525 | 100 | Plus |
chrXHet | 204175 | chrXHet | 79375..79677 | 1956..2258 | 1515 | 100 | Plus |
chrXHet | 204175 | chrXHet | 77155..77431 | 664..940 | 1385 | 100 | Plus |
chrXHet | 204175 | chrXHet | 78093..78286 | 1244..1437 | 970 | 100 | Plus |
chrXHet | 204175 | chrXHet | 78816..78927 | 1846..1957 | 545 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 23099474..23099888 | 1435..1849 | 2075 | 100 | Plus |
X | 23542271 | X | 23097392..23097732 | 1..341 | 1705 | 100 | Plus |
X | 23542271 | X | 23100860..23101194 | 2259..2593 | 1675 | 100 | Plus |
X | 23542271 | X | 23097793..23098115 | 341..663 | 1615 | 100 | Plus |
X | 23542271 | X | 23098614..23098918 | 940..1244 | 1525 | 100 | Plus |
X | 23542271 | X | 23100500..23100802 | 1956..2258 | 1515 | 100 | Plus |
X | 23542271 | X | 23098280..23098556 | 664..940 | 1385 | 100 | Plus |
X | 23542271 | X | 23099218..23099411 | 1244..1437 | 970 | 100 | Plus |
X | 23542271 | X | 23099941..23100052 | 1846..1957 | 545 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 23084566..23084980 | 1435..1849 | 2075 | 100 | Plus |
X | 23527363 | X | 23082484..23082824 | 1..341 | 1705 | 100 | Plus |
X | 23527363 | X | 23085952..23086286 | 2259..2593 | 1675 | 100 | Plus |
X | 23527363 | X | 23082885..23083207 | 341..663 | 1615 | 100 | Plus |
X | 23527363 | X | 23083706..23084010 | 940..1244 | 1525 | 100 | Plus |
X | 23527363 | X | 23085592..23085894 | 1956..2258 | 1515 | 100 | Plus |
X | 23527363 | X | 23083372..23083648 | 664..940 | 1385 | 100 | Plus |
X | 23527363 | X | 23084310..23084503 | 1244..1437 | 970 | 100 | Plus |
X | 23527363 | X | 23085033..23085144 | 1846..1957 | 545 | 99.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrXHet | 76267..76606 | 1..340 | 100 | -> | Plus |
chrXHet | 76668..76990 | 341..663 | 100 | -> | Plus |
chrXHet | 77155..77430 | 664..939 | 100 | -> | Plus |
chrXHet | 77489..77792 | 940..1243 | 100 | -> | Plus |
chrXHet | 78093..78284 | 1244..1435 | 100 | -> | Plus |
chrXHet | 78350..78763 | 1436..1849 | 100 | -> | Plus |
chrXHet | 78820..78927 | 1850..1957 | 100 | -> | Plus |
chrXHet | 79377..79677 | 1958..2258 | 100 | -> | Plus |
chrXHet | 79735..80067 | 2259..2591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(f)-RE | 1..2202 | 305..2506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(f)-RE | 1..2202 | 305..2506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(f)-RE | 1..2202 | 305..2506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(f)-RE | 1..2202 | 305..2506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(f)-RE | 1..2202 | 305..2506 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(f)-RE | 1..2591 | 1..2591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(f)-RE | 1..2591 | 1..2591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(f)-RE | 1..2574 | 18..2591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(f)-RE | 1..2591 | 1..2591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
su(f)-RE | 1..2574 | 18..2591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 23098614..23098917 | 940..1243 | 100 | -> | Plus |
X | 23098280..23098555 | 664..939 | 100 | -> | Plus |
X | 23097793..23098115 | 341..663 | 100 | -> | Plus |
X | 23097392..23097731 | 1..340 | 100 | -> | Plus |
X | 23099218..23099409 | 1244..1435 | 100 | -> | Plus |
X | 23099475..23099888 | 1436..1849 | 100 | -> | Plus |
X | 23099945..23100052 | 1850..1957 | 100 | -> | Plus |
X | 23100502..23100802 | 1958..2258 | 100 | -> | Plus |
X | 23100860..23101192 | 2259..2591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 23098614..23098917 | 940..1243 | 100 | -> | Plus |
X | 23098280..23098555 | 664..939 | 100 | -> | Plus |
X | 23097793..23098115 | 341..663 | 100 | -> | Plus |
X | 23097392..23097731 | 1..340 | 100 | -> | Plus |
X | 23099218..23099409 | 1244..1435 | 100 | -> | Plus |
X | 23099475..23099888 | 1436..1849 | 100 | -> | Plus |
X | 23099945..23100052 | 1850..1957 | 100 | -> | Plus |
X | 23100502..23100802 | 1958..2258 | 100 | -> | Plus |
X | 23100860..23101192 | 2259..2591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 23098614..23098917 | 940..1243 | 100 | -> | Plus |
X | 23098280..23098555 | 664..939 | 100 | -> | Plus |
X | 23097793..23098115 | 341..663 | 100 | -> | Plus |
X | 23097392..23097731 | 1..340 | 100 | -> | Plus |
X | 23099218..23099409 | 1244..1435 | 100 | -> | Plus |
X | 23099475..23099888 | 1436..1849 | 100 | -> | Plus |
X | 23099945..23100052 | 1850..1957 | 100 | -> | Plus |
X | 23100502..23100802 | 1958..2258 | 100 | -> | Plus |
X | 23100860..23101192 | 2259..2591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
XHet | 78036..78227 | 1244..1435 | 100 | -> | Plus |
XHet | 76210..76549 | 1..340 | 100 | -> | Plus |
XHet | 76611..76933 | 341..663 | 100 | -> | Plus |
XHet | 77098..77373 | 664..939 | 100 | -> | Plus |
XHet | 77432..77735 | 940..1243 | 100 | -> | Plus |
XHet | 78293..78706 | 1436..1849 | 100 | -> | Plus |
XHet | 78763..78870 | 1850..1957 | 100 | -> | Plus |
XHet | 79320..79620 | 1958..2258 | 100 | -> | Plus |
XHet | 79678..80010 | 2259..2591 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 23085594..23085894 | 1958..2258 | 100 | -> | Plus |
X | 23085952..23086284 | 2259..2591 | 100 | Plus | |
X | 23082484..23082823 | 1..340 | 100 | -> | Plus |
X | 23082885..23083207 | 341..663 | 100 | -> | Plus |
X | 23083372..23083647 | 664..939 | 100 | -> | Plus |
X | 23083706..23084009 | 940..1243 | 100 | -> | Plus |
X | 23084310..23084501 | 1244..1435 | 100 | -> | Plus |
X | 23084567..23084980 | 1436..1849 | 100 | -> | Plus |
X | 23085037..23085144 | 1850..1957 | 100 | -> | Plus |
Translation from 304 to 2505
> LD38348.pep MSSARDLIKVDIEWGMERLVRAQQVVELRPYDIESWSVMIREAQTRPIHE VRSLYESLVNVFPTTARYWKLYIEMEMRSRYYERVEKLFQRCLVKILNID LWKLYLTYVKETKSGLSTHKEKMAQAYDFALEKIGMDLHSFSIWQDYIYF LRGVEAVGNYAENQKITAVRRVYQKAVVTPIVGIEQLWKDYIAFEQNINP IISEKMSLERSKDYMNARRVAKELEYHTKGLNRNLPAVPPTLTKEEVKQV ELWKRFITYEKSNPLRTEDTALVTRRVMFATEQCLLVLTHHPAVWHQASQ FLDTSARVLTEKGDVQAAKIFADECANILERSINGVLNRNALLYFAYADF EEGRLKYEKVHTMYNKLLQLPDIDPTLVYVQYMKFARRAEGIKSARSIFK KAREDVRSRYHIFVAAALMEYYCSKDKEIAFRIFELGLKRFGGSPEYVMC YIDYLSHLNEDNNTRVLFERVLSSGGLSPHKSVEVWNRFLEFESNIGDLS SIVKVERRRSAVFENLKEYEGKETAQLVDRYKFLDLYPCTSTELKSIGYA ENVGIILNKVGGGAQSQNTGEVETDSEATPPLPRPDFSQMIPFKPRPCAH PGAHPLAGGVFPQPPALAALCATLPPPNSFRGPFVSVELLFDIFMRLNLP DSAPQPNGDNELSPKIFDLAKSVHWIVDTSTYTGVQHSVTAVPPRRRRLL PGGDDSDDELQTAVPPSHDIYRLRQLKRFAKSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19444-PA | 638 | GF19444-PA | 1..314 | 1..314 | 1686 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19763-PA | 733 | GG19763-PA | 1..733 | 1..733 | 3920 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12049-PA | 736 | GH12049-PA | 1..736 | 1..733 | 3699 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
su(f)-PG | 733 | CG17170-PG | 1..733 | 1..733 | 3819 | 100 | Plus |
su(f)-PE | 733 | CG17170-PE | 1..733 | 1..733 | 3819 | 100 | Plus |
su(f)-PF | 765 | CG17170-PF | 1..765 | 1..733 | 3776 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21567-PA | 730 | GI21567-PA | 1..730 | 1..733 | 3769 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18331-PA | 895 | GL18331-PA | 171..895 | 8..733 | 3687 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27548-PA | 732 | GA27548-PA | 1..732 | 1..733 | 3728 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13282-PA | 733 | GM13282-PA | 1..733 | 1..733 | 3935 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16693-PA | 732 | GJ16693-PA | 1..315 | 1..315 | 1683 | 98.1 | Plus |
Dvir\GJ16693-PA | 732 | GJ16693-PA | 248..417 | 481..651 | 399 | 59.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25707-PA | 741 | GK25707-PA | 1..741 | 1..733 | 3736 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15242-PA | 676 | GE15242-PA | 1..313 | 1..313 | 1691 | 99.4 | Plus |
Translation from 304 to 2505
> LD38348.hyp MSSARDLIKVDIEWGMERLVRAQQVVELRPYDIESWSVMIREAQTRPIHE VRSLYESLVNVFPTTARYWKLYIEMEMRSRYYERVEKLFQRCLVKILNID LWKLYLTYVKETKSGLSTHKEKMAQAYDFALEKIGMDLHSFSIWQDYIYF LRGVEAVGNYAENQKITAVRRVYQKAVVTPIVGIEQLWKDYIAFEQNINP IISEKMSLERSKDYMNARRVAKELEYHTKGLNRNLPAVPPTLTKEEVKQV ELWKRFITYEKSNPLRTEDTALVTRRVMFATEQCLLVLTHHPAVWHQASQ FLDTSARVLTEKGDVQAAKIFADECANILERSINGVLNRNALLYFAYADF EEGRLKYEKVHTMYNKLLQLPDIDPTLVYVQYMKFARRAEGIKSARSIFK KAREDVRSRYHIFVAAALMEYYCSKDKEIAFRIFELGLKRFGGSPEYVMC YIDYLSHLNEDNNTRVLFERVLSSGGLSPHKSVEVWNRFLEFESNIGDLS SIVKVERRRSAVFENLKEYEGKETAQLVDRYKFLDLYPCTSTELKSIGYA ENVGIILNKVGGGAQSQNTGEVETDSEATPPLPRPDFSQMIPFKPRPCAH PGAHPLAGGVFPQPPALAALCATLPPPNSFRGPFVSVELLFDIFMRLNLP DSAPQPNGDNELSPKIFDLAKSVHWIVDTSTYTGVQHSVTAVPPRRRRLL PGGDDSDDELQTAVPPSHDIYRLRQLKRFAKSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
su(f)-PG | 733 | CG17170-PG | 1..733 | 1..733 | 3819 | 100 | Plus |
su(f)-PE | 733 | CG17170-PE | 1..733 | 1..733 | 3819 | 100 | Plus |
su(f)-PF | 765 | CG17170-PF | 1..765 | 1..733 | 3776 | 95.8 | Plus |