Clone LD38355 Report

Search the DGRC for LD38355

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:383
Well:55
Vector:pOT2
Associated Gene/TranscriptRN-tre-RC
Protein status:LD38355.pep: gold
Preliminary Size:2599
Sequenced Size:2700

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8085 2001-10-10 Blastp of sequenced clone
CG8085 2003-01-01 Sim4 clustering to Release 3
RN-tre 2008-04-29 Release 5.5 accounting
RN-tre 2008-08-15 Release 5.9 accounting
RN-tre 2008-12-18 5.12 accounting
CG8085 2011-03-01 Transcript Validation

Clone Sequence Records

LD38355.complete Sequence

2700 bp (2700 high quality bases) assembled on 2001-10-10

GenBank Submission: AY061446

> LD38355.complete
CCCAAATGTATCGGAAACATGCAGCCGAGATAAAATAGTGAAAAACTAGT
TACCAAACATAACCGATCAGTGCGGATAATAAGAATTGGCAATTCAAAAT
TAAATGTTTCGCGCTATCGCCCAGTCAGCTCAGAAGCAGCCGCTCCCCAA
CTGAGAGCACAGAGAAACCAGCTCTGGCCACTTGCTCCTCCGGATCCGGC
TCCTGCTCCTGTCCCCGATCCCCTCCCCCACCCGCCAAATCCTGATCCTG
CTCCAAATGACTGACGGCGAACAGCAGGAGGCGCTGGTCAAGCGGGCCGA
GGACGAGCGCGAGGACATCTTCCGGCGCTACGAACTCGGGCTGGATCCCA
GCAATGTGGTGGACTCCTGGGAGAATCCCACCTTCGAGATCTACCACAGG
ACAGACAAATATGGCTTCTTGCACGACTCGCGGCTGCCGTCGACGCGTGA
TGCCCAGGAGGTGCATCGCAACAAGATTGAAATGGAGCGGGACAAAAAGT
GGATGAAGATGCTAAATCAGTGGCCGCCGCCCCAGGATAAGCTGCACAAG
CGCGTCTACAAGGGCATACCGGATCGCGTGCGTATGGTGGCCTGGAATAA
GCTGCTCGACATCCAGCAATCGATAAACAACAATGCTGGCGTCTACCTCC
GAATGCTGCAGCTGGCCAGGAAGTACTCCACGGAGACGCGACAAATCGAT
GCCGATGTGAATCGTCAGTTTCGCGACAATCTTGCCTTTCGCGAGCGCTA
CAGCGTAAAGCAGTGCTCGCTATTCAATGTGCTCAACGCCTATAGCATCT
ACAACTCGGAGCTGGGCTACTGCCAGGGCATGGCCTGTGTGGCTGGCGTG
CTGTTGCTTTATTTGCACGAGGAGGAGGCTTTTTGGGCATTAAATACCCT
GATAACAGACCAAAAATACGGCATGCACGGGCTGTTTATCGAGGGATTCC
CGAAGCTGACGCGATTCATCGATCACCACGACCGCATCATGTCGAAAATA
ATGCGAAAACTACACAAGCACTTTACCAAACACAACGTTGACGCCCTGCT
GTACGCTATTAAGTGGTTCTTTGTCGTCTTCGTGGAACGCGTTCCTTTTA
GTTTGAGTCTGCGCGTGTGGGATATATTCATGTTAGACGGCGATCGCGTC
ATACTGTCCATGGCCATCACCATTCTGTACCTTCACAAAGACGAACTATT
GCGCCTGAAGGACATGGACGCCATCATTGAGTACTTGCAAGTACGGCTGC
ACAAGAACTTTGGCTACAGCGACGATGATGCCATTCAGGCTCTGGAACGC
GTGATGAAGAAGCTGAAGGACCTCAAGTTGGATGTGCCGCCGCCAGCCAA
GTCAAACGAGTTCCCCACCCGCAAACTAGGTGACTTCGTGGAGGCGGATA
TGGAGAAGAAGATCGGGCGCAGACGCAATGATTATACAGACGCGGAGAAG
CAAGTCATAACAGATGTGATATCAAGACAAGAACAAAACGCGATCGACGT
TCAGTCCACAGTGTCCTACGAGACTTCGGAGTGCGCAACGGTTACGCTTA
CCGTTCCCGAGGATTCGCACTCAATACGAAGTTCGCTTGCAGGTACTTCA
GTTGCCTCGCACGGCTCCTCGGAAACGATGTCGCTGGAGGACAACAACAT
TCACCTGAGGACCGCCAACATGCTGCAGAACACTCCGCAGCGCGAGATGC
TCCTGGGCACCTGACGTCAACTGCCGCCCGCGTCCGTCGCGGCGCAGGCA
GCTGCAGAGAATCGCCAAACACTCACCACAGCCACCTCTGCGGGATTAGC
AGTAGCAGGAGCAACGGAAGCTAGCCCCACATCCTCACCGAGAGCTACGC
CCACACCGCCGCCCGTGCCGCCGAGATCTCCGCTGTCGCTGGGATGACTA
GCAAAGCAAAAGGCGGCGGCCAACCGGAGCGGGATCACCTAGTTCCTGGT
ACTAGCCGTCGTCTGCCTTTGATTAGCCTTAAGTCTTCAAGCCCTGCCAC
CGCTGCAAACACTAGAGCTAGGCCTTCCATGGGTGCAGCCAATAGCAATC
ACCAAGCTTCGAGAGAATGAGACCACACACACACACACTTTGTACATACA
CCGCGGGAAGCTTGGGGCACGACTTGGTAGTGACTTAGATGCGCCAAATT
AAATTTACAACAGTTACGAGTTAAACAATTGATAAAAGCAATCGAGAATT
ACATAAAATACATAAAAACTGCTAATGGAACAATATTTAAGCAAGAGCAA
ATCGTATCTAATACAACTACAAAGCGGTTAGAAGTCTATTTAATTGCAAA
TTGAATTCAACTCAAGCATATATATTATAGAAATTGTTGTAAATTGTACT
TGTATATACGTACCAAACAAAATACAAAGCAACGTTAAAAAGTTACGTCC
ATGAAATGCAAACGAATGTAAAGGCGAAAGGCAACCAAATATTAATTGAA
AACTATAGATAACAGAATCGTACGATTACGCTAGATTTATGTATAGTTAT
ACCCTCATAGCAGTACACGAACCGAGCAAACTGACAAATGAATTGAGTAT
TTACCATTAATTTCATGATTAAACTTTACACAAACATGAATCACTAGTTT
AAGTTTCTCAGCAAAAGGAATTATGTATATTTTAATTTAAATTATGTTCA
ACAACGTCTCCAAATAAAACTGTCAACTGAAAAAAAAAAAAAAAAAAAAA

LD38355.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:13:09
Subject Length Description Subject Range Query Range Score Percent Strand
RN-tre-RC 2779 RN-tre-RC 101..2779 1..2679 13395 100 Plus
RN-tre-RD 2741 RN-tre-RD 169..2741 107..2679 12865 100 Plus
RN-tre.a 2424 RN-tre.a 717..2156 106..1545 7185 99.9 Plus
RN-tre.a 2424 RN-tre.a 2152..2424 1592..1864 1365 100 Plus
RN-tre.a 2424 RN-tre.a 33..138 1..106 530 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:32:00
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9872133..9873164 2679..1648 5145 99.9 Minus
chr2R 21145070 chr2R 9876259..9876946 1092..405 3425 99.9 Minus
chr2R 21145070 chr2R 9875816..9876201 1476..1091 1900 99.5 Minus
chr2R 21145070 chr2R 9877003..9877305 408..106 1515 100 Minus
chr2R 21145070 chr2R 9873308..9873414 1647..1541 535 100 Minus
chr2R 21145070 chr2R 9877884..9877989 106..1 515 99.1 Minus
chr2R 21145070 chr2R 9875691..9875757 1541..1475 335 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:33:03 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13984813..13985846 2681..1648 5170 100 Minus
2R 25286936 2R 13988941..13989628 1092..405 3425 99.9 Minus
2R 25286936 2R 13988498..13988883 1476..1091 1930 100 Minus
2R 25286936 2R 13989685..13989987 408..106 1515 100 Minus
2R 25286936 2R 13985990..13986096 1647..1541 535 100 Minus
2R 25286936 2R 13990566..13990671 106..1 530 100 Minus
2R 25286936 2R 13988373..13988439 1541..1475 335 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:37:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 13986012..13987045 2681..1648 5170 100 Minus
2R 25260384 2R 13990140..13990827 1092..405 3425 99.8 Minus
2R 25260384 2R 13989697..13990082 1476..1091 1930 100 Minus
2R 25260384 2R 13990884..13991186 408..106 1515 100 Minus
2R 25260384 2R 13987189..13987295 1647..1541 535 100 Minus
2R 25260384 2R 13991765..13991870 106..1 530 100 Minus
2R 25260384 2R 13989572..13989638 1541..1475 335 100 Minus
Blast to na_te.dros performed on 2019-03-15 18:31:59 has no hits.

LD38355.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:33:03 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9872133..9873164 1648..2679 99 <- Minus
chr2R 9873308..9873413 1542..1647 100 <- Minus
chr2R 9875691..9875755 1477..1541 100 <- Minus
chr2R 9875816..9876201 1091..1476 99 <- Minus
chr2R 9876261..9876942 409..1090 100 <- Minus
chr2R 9877003..9877304 107..408 100 <- Minus
chr2R 9877884..9877989 1..106 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:20:35 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
RN-tre-RC 1..1458 257..1714 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:53:18 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
RN-tre-RD 1..1458 257..1714 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:07:04 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
RN-tre-RF 1..1641 257..1897 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:22:16 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
RN-tre-RC 1..1458 257..1714 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:05:57 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
RN-tre-RF 1..1641 257..1897 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:38:21 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
RN-tre-RC 16..2694 1..2679 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:53:18 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
RN-tre-RC 16..2694 1..2679 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:07:04 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
RN-tre-RC 37..2715 1..2679 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:22:16 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
RN-tre-RC 16..2694 1..2679 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:05:57 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
RN-tre-RC 37..2715 1..2679 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:33:03 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13984815..13985846 1648..2679 100 <- Minus
2R 13985990..13986095 1542..1647 100 <- Minus
2R 13988373..13988437 1477..1541 100 <- Minus
2R 13988498..13988883 1091..1476 100 <- Minus
2R 13988943..13989624 409..1090 100 <- Minus
2R 13989685..13989986 107..408 100 <- Minus
2R 13990566..13990671 1..106 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:33:03 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13984815..13985846 1648..2679 100 <- Minus
2R 13985990..13986095 1542..1647 100 <- Minus
2R 13988373..13988437 1477..1541 100 <- Minus
2R 13988498..13988883 1091..1476 100 <- Minus
2R 13988943..13989624 409..1090 100 <- Minus
2R 13989685..13989986 107..408 100 <- Minus
2R 13990566..13990671 1..106 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:33:03 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13984815..13985846 1648..2679 100 <- Minus
2R 13985990..13986095 1542..1647 100 <- Minus
2R 13988373..13988437 1477..1541 100 <- Minus
2R 13988498..13988883 1091..1476 100 <- Minus
2R 13988943..13989624 409..1090 100 <- Minus
2R 13989685..13989986 107..408 100 <- Minus
2R 13990566..13990671 1..106 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:07:04 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9872320..9873351 1648..2679 100 <- Minus
arm_2R 9873495..9873600 1542..1647 100 <- Minus
arm_2R 9875878..9875942 1477..1541 100 <- Minus
arm_2R 9876003..9876388 1091..1476 100 <- Minus
arm_2R 9876448..9877129 409..1090 100 <- Minus
arm_2R 9877190..9877491 107..408 100 <- Minus
arm_2R 9878071..9878176 1..106 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:59:23 Download gff for LD38355.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13990884..13991185 107..408 100 <- Minus
2R 13986014..13987045 1648..2679 100 <- Minus
2R 13987189..13987294 1542..1647 100 <- Minus
2R 13989572..13989636 1477..1541 100 <- Minus
2R 13989697..13990082 1091..1476 100 <- Minus
2R 13990142..13990823 409..1090 100 <- Minus
2R 13991765..13991870 1..106 100   Minus

LD38355.pep Sequence

Translation from 256 to 1713

> LD38355.pep
MTDGEQQEALVKRAEDEREDIFRRYELGLDPSNVVDSWENPTFEIYHRTD
KYGFLHDSRLPSTRDAQEVHRNKIEMERDKKWMKMLNQWPPPQDKLHKRV
YKGIPDRVRMVAWNKLLDIQQSINNNAGVYLRMLQLARKYSTETRQIDAD
VNRQFRDNLAFRERYSVKQCSLFNVLNAYSIYNSELGYCQGMACVAGVLL
LYLHEEEAFWALNTLITDQKYGMHGLFIEGFPKLTRFIDHHDRIMSKIMR
KLHKHFTKHNVDALLYAIKWFFVVFVERVPFSLSLRVWDIFMLDGDRVIL
SMAITILYLHKDELLRLKDMDAIIEYLQVRLHKNFGYSDDDAIQALERVM
KKLKDLKLDVPPPAKSNEFPTRKLGDFVEADMEKKIGRRRNDYTDAEKQV
ITDVISRQEQNAIDVQSTVSYETSECATVTLTVPEDSHSIRSSLAGTSVA
SHGSSETMSLEDNNIHLRTANMLQNTPQREMLLGT*

LD38355.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:39:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11146-PA 573 GF11146-PA 1..476 1..482 2153 82.4 Plus
Dana\GF22783-PA 236 GF22783-PA 31..149 351..475 393 64.8 Plus
Dana\GF24391-PA 1188 GF24391-PA 564..894 4..354 389 30.3 Plus
Dana\GF18380-PA 359 GF18380-PA 46..277 76..307 349 34.3 Plus
Dana\GF22394-PA 782 GF22394-PA 94..477 82..476 317 24.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22451-PA 485 GG22451-PA 1..485 1..485 2608 99.4 Plus
Dere\GG14306-PA 1194 GG14306-PA 629..900 81..354 379 32.3 Plus
Dere\GG18255-PA 363 GG18255-PA 46..277 76..307 345 33.9 Plus
Dere\GG18855-PA 824 GG18855-PA 91..474 82..476 324 24.4 Plus
Dere\GG12997-PA 1382 GG12997-PA 747..984 100..333 281 29 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:39:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22945-PA 621 GH22945-PA 24..478 9..470 1982 77.5 Plus
Dgri\GH15059-PA 1219 GH15059-PA 648..921 86..354 387 32.9 Plus
Dgri\GH23093-PA 366 GH23093-PA 46..277 76..307 341 33.9 Plus
Dgri\GH12377-PA 773 GH12377-PA 87..470 82..476 320 24.2 Plus
Dgri\GH19507-PA 1372 GH19507-PA 722..974 96..351 280 28.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:22
Subject Length Description Subject Range Query Range Score Percent Strand
RN-tre-PF 546 CG8085-PF 1..485 1..485 2531 100 Plus
RN-tre-PC 485 CG8085-PC 1..485 1..485 2531 100 Plus
RN-tre-PE 468 CG8085-PE 1..468 1..485 2422 96.5 Plus
RN-tre-PA 571 CG8085-PA 1..476 1..482 2268 90.9 Plus
RN-tre-PB 457 CG8085-PB 1..428 1..428 2248 100 Plus
GAPcenA-PA 1005 CG7112-PA 493..858 81..426 367 29.1 Plus
GAPcenA-PB 1194 CG7112-PB 629..994 81..426 367 29.1 Plus
wkd-PB 363 CG5344-PB 48..277 78..307 341 33.8 Plus
wkd-PA 363 CG5344-PA 48..277 78..307 341 33.8 Plus
Evi5-PB 779 CG11727-PB 91..474 82..476 331 24 Plus
Evi5-PA 807 CG11727-PA 91..474 82..476 331 24 Plus
Evi5-PC 773 CG11727-PC 91..447 82..443 323 24.5 Plus
Evi5-PE 773 CG11727-PE 91..447 82..443 323 24.5 Plus
Evi5-PD 801 CG11727-PD 91..447 82..443 323 24.5 Plus
CG5916-PB 330 CG5916-PB 42..284 78..323 259 26.6 Plus
CG5916-PA 330 CG5916-PA 42..284 78..323 259 26.6 Plus
plx-PF 1352 CG42612-PF 757..950 139..333 259 31.6 Plus
plx-PA 1379 CG42612-PA 784..977 139..333 259 31.6 Plus
plx-PD 1406 CG42612-PD 811..1004 139..333 259 31.6 Plus
plx-PE 1518 CG42612-PE 923..1116 139..333 259 31.6 Plus
plx-PC 1572 CG42612-PC 977..1170 139..333 259 31.6 Plus
CG7324-PB 1256 CG7324-PB 459..788 100..442 227 23.1 Plus
CG7324-PA 1291 CG7324-PA 459..788 100..442 227 23.1 Plus
CG12241-PA 804 CG12241-PA 152..387 91..327 210 23.1 Plus
CG42795-PC 2904 CG42795-PC 206..451 87..321 179 23.7 Plus
CG42795-PF 2928 CG42795-PF 206..451 87..321 179 23.7 Plus
CG42795-PB 3068 CG42795-PB 85..330 87..321 179 23.7 Plus
CG42795-PA 3189 CG3996-PA 206..451 87..321 179 23.7 Plus
CG42795-PE 3190 CG42795-PE 206..451 87..321 179 23.7 Plus
CG42795-PG 3213 CG42795-PG 206..451 87..321 179 23.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:39:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18436-PA 613 GI18436-PA 23..470 9..463 2071 83.3 Plus
Dmoj\GI12826-PA 1217 GI12826-PA 648..919 81..354 385 31.9 Plus
Dmoj\GI10296-PA 365 GI10296-PA 46..277 76..307 341 33.9 Plus
Dmoj\GI14892-PA 772 GI14892-PA 86..469 82..476 320 24.2 Plus
Dmoj\GI22657-PA 330 GI22657-PA 37..284 73..323 290 28.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:39:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20082-PA 590 GL20082-PA 1..469 1..475 2140 82.9 Plus
Dper\GL24699-PA 1229 GL24699-PA 647..918 81..354 373 31.5 Plus
Dper\GL12234-PA 366 GL12234-PA 46..277 76..307 343 33.9 Plus
Dper\GL14988-PA 786 GL14988-PA 98..481 82..476 325 24.4 Plus
Dper\GL24515-PA 733 GL24515-PA 93..330 100..333 276 28.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24924-PB 485 GA24924-PB 1..485 1..485 2396 90.1 Plus
Dpse\GA24924-PA 590 GA24924-PA 1..458 1..464 2133 84.3 Plus
Dpse\GA24924-PC 434 GA24924-PC 1..428 1..428 2103 89.5 Plus
Dpse\GA20112-PA 1227 GA20112-PA 645..916 81..354 379 31.9 Plus
Dpse\GA18817-PA 366 GA18817-PA 46..277 76..307 343 33.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20237-PA 485 GM20237-PA 1..485 1..485 2612 99.6 Plus
Dsec\GM25048-PA 1194 GM25048-PA 629..900 81..354 379 32.3 Plus
Dsec\GM23956-PA 363 GM23956-PA 46..277 76..307 345 33.9 Plus
Dsec\GM13069-PA 342 GM13069-PA 91..332 82..328 301 27.6 Plus
Dsec\GM10833-PA 1406 GM10833-PA 767..1004 100..333 281 29 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25722-PA 561 GD25722-PA 1..460 1..479 2238 88.3 Plus
Dsim\GD14085-PA 1141 GD14085-PA 629..900 81..354 379 32.3 Plus
Dsim\GD18765-PA 363 GD18765-PA 46..277 76..307 343 33.9 Plus
Dsim\GD15988-PA 774 GD15988-PA 91..474 82..476 317 24.2 Plus
Dsim\GD19813-PA 981 GD19813-PA 342..579 100..333 281 29 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21521-PA 494 GJ21521-PA 15..494 5..485 2337 88.4 Plus
Dvir\GJ12967-PA 1220 GJ12967-PA 650..1050 81..471 394 29.1 Plus
Dvir\GJ11103-PA 368 GJ11103-PA 46..277 76..307 351 34.3 Plus
Dvir\GJ15325-PA 773 GJ15325-PA 87..470 82..476 323 24.2 Plus
Dvir\GJ23386-PA 326 GJ23386-PA 42..280 78..323 268 28.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:39:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15730-PA 481 GK15730-PA 1..481 1..485 2321 88.2 Plus
Dwil\GK17754-PA 1225 GK17754-PA 657..928 81..354 384 32.3 Plus
Dwil\GK14254-PA 364 GK14254-PA 46..277 76..307 344 33.9 Plus
Dwil\GK16367-PA 775 GK16367-PA 86..470 81..476 313 24.1 Plus
Dwil\GK13206-PA 1398 GK13206-PA 741..978 100..333 280 29 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:39:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\RN-tre-PA 485 GE13322-PA 1..485 1..485 2595 98.8 Plus
Dyak\GE20734-PA 1194 GE20734-PA 629..900 81..354 379 32.3 Plus
Dyak\GE24183-PA 398 GE24183-PA 81..312 76..307 343 33.9 Plus
Dyak\GE17295-PA 779 GE17295-PA 91..474 82..476 321 24.4 Plus
Dyak\GE10157-PA 1414 GE10157-PA 773..1010 100..333 281 29 Plus

LD38355.hyp Sequence

Translation from 256 to 1713

> LD38355.hyp
MTDGEQQEALVKRAEDEREDIFRRYELGLDPSNVVDSWENPTFEIYHRTD
KYGFLHDSRLPSTRDAQEVHRNKIEMERDKKWMKMLNQWPPPQDKLHKRV
YKGIPDRVRMVAWNKLLDIQQSINNNAGVYLRMLQLARKYSTETRQIDAD
VNRQFRDNLAFRERYSVKQCSLFNVLNAYSIYNSELGYCQGMACVAGVLL
LYLHEEEAFWALNTLITDQKYGMHGLFIEGFPKLTRFIDHHDRIMSKIMR
KLHKHFTKHNVDALLYAIKWFFVVFVERVPFSLSLRVWDIFMLDGDRVIL
SMAITILYLHKDELLRLKDMDAIIEYLQVRLHKNFGYSDDDAIQALERVM
KKLKDLKLDVPPPAKSNEFPTRKLGDFVEADMEKKIGRRRNDYTDAEKQV
ITDVISRQEQNAIDVQSTVSYETSECATVTLTVPEDSHSIRSSLAGTSVA
SHGSSETMSLEDNNIHLRTANMLQNTPQREMLLGT*

LD38355.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:12:33
Subject Length Description Subject Range Query Range Score Percent Strand
RN-tre-PF 546 CG8085-PF 1..485 1..485 2531 100 Plus
RN-tre-PC 485 CG8085-PC 1..485 1..485 2531 100 Plus
RN-tre-PE 468 CG8085-PE 1..468 1..485 2422 96.5 Plus
RN-tre-PA 571 CG8085-PA 1..476 1..482 2268 90.9 Plus
RN-tre-PB 457 CG8085-PB 1..428 1..428 2248 100 Plus