BDGP Sequence Production Resources |
Search the DGRC for LD38375
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 383 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7728-RA |
Protein status: | LD38375.pep: gold |
Preliminary Size: | 4011 |
Sequenced Size: | 3675 |
Gene | Date | Evidence |
---|---|---|
CG7728 | 2001-10-10 | Blastp of sequenced clone |
CG7728 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7728 | 2008-04-29 | Release 5.5 accounting |
CG7728 | 2008-08-15 | Release 5.9 accounting |
CG7728 | 2008-12-18 | 5.12 accounting |
3675 bp (3675 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061447
> LD38375.complete TTTCATAATCTGGCAACACTGGCTCCACGTGCAGCGCGCAAACAGCGGAT AATTTAATAATTTAATATATTTAAAGGCTGTAACAATGGCCGACGATGCC GGCCAGGACAAGCGAAAGCAGCACCGCGCCCGCCAGTCCGGCGTGAAGGC GGACAAGAAAAAGCTGAAGGCCAAGAAGGACTCCAACCAGAAGGAGCCCG AGTTGACCGCCAGGCAGAGGAATCCCAAGGCGTTCGCCATCAACTCGGCG CAGCGAGCAGAGAGGAACTTCCGGCGCAAGGAGGACCTTACGGCCAAGAA GCAGCATATTCCGGTTGTCGATCAAACTCCGAACGTACCGCCACCCGTAC TGATTGCCGTGGTGGGACCACCCAAAGTGGGAAAGACAACGCTGATCAAG GACCTAATTAAAAGCTTTACGCGGACGAATGTCACCGATATAAAGGGTCC CATTACTATTGTGACCTCCAAGAAGCGCCGGATTACCCTGCTGGAGTGCA ACAACGATGTGAACTCCATGATCGATGTGGCCAAATGCGCCGATCTGGTG CTGCTGCTCTGCGACGCAAGCTACGGCTTCGAAATGGAGATCTTTGAGTT CCTGAACATCTGCCAGGTGCACGGCATGCCCAAGATAATGGGCGTACTTA CCCACCTGGACATGATCAAGAACCCCAAGCAGCTGAGGAAACGAAAGAAG GAACTGAAGCACCGCTTTTGGACGGAAGTCTACGATGGCGCCAAGCTATT CTACCTTTCTGGACTTCTTCACGGCGAGTACCTCCGGAACGAAGTCAAAA ACCTGGGACGATTTATCTCTGTGATGAAGTTTCGCCCGCTGCAGTGGCGA GGTGCACATAGTTATCTGCTGGTAGACCGCATCGAGGATGTGACAAACAC AGATCGCGTGCGCCGAGATCCTAAGTGCGATCGCGAGGTAGTACTCTATG GCTATGTCCGAGGAGTTCCTCTCAAGCAAGAACACATGGTGCACATAGCT GGCCTGGGGGATGCCCGCATCGACGAGTTAAACGTCATTCCCGATCCTTG CCCCCTGCCTGGGACGGAAAAGAAGCGAAGTTTGCTGGAGAAAGAGCGAT TACTGTATGCACCCATGTCCGGAGTCGGTGGCATTGTTTACGACAAGGAT GCTGTCTACATTGAGCTACAGGGATCGCACTCGCACAAGGAACAGGAGCA GACCGCTGAGGCTGCCGAGCAGGCGGAGCTGGTGAACAAGCTGATCGATA AGAAGGCCACCATTGATGAACAGATGGAACAGCAGGAGTTCCGTCTATTC TCAGATGCCAAGCCCATCAAGTCCAAGGACTTCCGCAATGATCAAGACGA CGAAGAGGAGGATGAAGAGGCGGAAAGTAGTGAGAATGAGGATGACGATG GAGAGGACTCTGGTCTGGATGCCGCTGACAGTGAGGAGGAGCAGCAGGAT GAGTTCGATGCGGACGATTGGCGTGGGGAGAACAGTGAGGAGGAGGAGGA TGCTGAGGAAGACGCTTCTTCTGGCGATGAGGAATATCAAAGCCTGGGAA ATGTGAAAACATCCAACGAATCCGATTCGGACGATGAGGAGGCTCGCGTC CTGGCCAGCAACATGAGCTGGAAAACTAATCTGGCCCAGAAGGCCCGCGA TGCTTTTCTCCAACGTCACTCGGAGTCGAAAAACCTGATGCGCCTTGTCT ACGGTGTGTATAATCAGAGTGAACATAGTCGTCAGGAGGCAGAAGCAGAA GACGACTCAGAAGAAGAACTAGGTGGTCTGTTCCGGGTGGCTGCTAAAAA ACAAAGCCTGAAGCAATCAGACCAGGACATTAGGGATAAAGACGAGCGGT GTTTCTTCGAGTATCAGGGTGATGCCACTCGGGATTGGCTGGCGGAAGAC AACAAGGAACTTATCAAGAACTGCTTCGTTACCGGCAAATGGAAGGCCAG CGAGGATGCTGAAAATCTACTAAAGATGGACGACATGAGTGACGCAGAAA GCGAAGTGTACGGAGACTTTGAGGATTTAGAGACGGGCGAGCAGCACAGC GGTAAACCCAAAGCAGAAGATGGTGGAGAATCGGAAGAAGAGAATTCCAA GCCTGAGGATTCTTCAGCACCCAAGCGCAAACTGACCCGCGTAGAGGAGG AAAATCTCACCAAGGCCGAGCTGATGGCAAAAAAATTGAAGTTAAAGGCC AAGTTCGATGCGGAGTACGACAACAGCGGCGAGGGAAAGGGCGAGGAGGA TAATGGTCGGATAACTGGCGATCACTCCTTCTACGAGGACCTTAAAGCAG AGGCTCAGCGGCAGAGCGAGCTAAACAAGAGCGAGTTTGCCCACCTGGAC AATGAGTTCCGCATTCAGATCGAGGGCTATCGACCGGGTCTTTACGTTCG CCTCGGATTCAAGCAGCTGCCCGCCGAGTTCATCGAGAATTTCGATGCCA GCTATCCGGTACTGGTTGGTGCCTTAAATATGACCGAGGAGAACGTTGGC TATGTCAACTGCAAGGTGAAGAAGCATCGCTGGTACAAGAAGATCCTGAA AACAGGTGATCCTTTGATCATCTCAATGGGTTGGCGCCGTTTTCAAACAG TGGCCATCTATGCCAAGGTGGAAGACAACTTCCGACAACGCTACCTTAAG TATACGCCCAATCATGTCACCTGCAGCATGACCTTCTGGGGCCCGATAAC GCCTCAAAATACTGGTTTCCTAGCCTTGCAGACTGTGCGTCAGGATCAGG AGGAGATGCGTCGGCTTGGCTTCCGGATAGCAGCCACAGGCTGTGTCACC GAGGTGGACAAATCTTCGCAGATCATGAAGAAGCTCAAGCTGGTGGGACA TCCGTTTAAGATCTACAAGAAGACGGCCTTTGTGAAGGACATGTTCAACT CCTCACTGGAAGTTGCAAAGTTCGAAGGAGCCAAAATCAAAACGGTGTCT GGAATTCGTGGACAGATCAAGAAGGCTCACCACACACCCGAAGGTTCTTA TCGTGCCACATTTGAGGACAAGATCCTTCTGAGCGACATAGTCTTCTGCC GCACCTGGTTCCGTGTGGAAGTGCCTCGGTTCTATGCTCCTGTGTCCTCA CTCCTGCTGCCGCTGGACCAGAAGAGCCAATGGCAGGGCATGAAGACGCT CGGTCAACTCAAGCGGGAGAGGGCTGTGCAAAATGCAGCCCAGCCCGACA GTATGTACACAACGATCGTGCGCAAGGAGAAAATTTTCCGCCCACTTACC ATACCCAAGGCCCTTCAGCGGGCGCTGCCGTACAAGGACAAGCCCAAGCT GGGACCGGAGAATCCCAAGGCGGCGCTGGAGCGCGTGGCCGTGGTTAACT CACCGTACGAGCAGAAGGTGTCCAAGATGATGAAGATGATTGAGACCAAC TTTAAGGACAAGCGGCAACGTGAACGCATGGAAATGAAGAAGCGCATCAA AAACTACCGCGAAAAGAAGCGGGAGAAGATGGCTTCCCAGGAGCGGCGTC AAAAGGAGCTGCGCAAGAAGGTATCGCGGGCCATCAGCAAGCTGCGAGGA AAGCAGACTGCCTGATTTTATTCTCGAGAGTAATCAATGGACAATTCTTA GGCATTTTGCTGTATAAAATGTAGATATAACAAAATAAAATGTTTTTAAT AATTGAGAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 17005992..17007862 | 1..1871 | 98 | -> | Plus |
chr3L | 17007923..17009708 | 1872..3657 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7728-RA | 1..3480 | 86..3565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7728-RA | 1..3480 | 86..3565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7728-RA | 1..3480 | 86..3565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7728-RA | 1..3480 | 86..3565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7728-RA | 1..3480 | 86..3565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7728-RA | 1..3657 | 1..3657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7728-RA | 1..3657 | 1..3657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7728-RA | 19..3675 | 1..3657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7728-RA | 1..3657 | 1..3657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7728-RA | 19..3675 | 1..3657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17016554..17018424 | 1..1871 | 100 | -> | Plus |
3L | 17018485..17020270 | 1872..3657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17016554..17018424 | 1..1871 | 100 | -> | Plus |
3L | 17018485..17020270 | 1872..3657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17016554..17018424 | 1..1871 | 100 | -> | Plus |
3L | 17018485..17020270 | 1872..3657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 17009654..17011524 | 1..1871 | 100 | -> | Plus |
arm_3L | 17011585..17013370 | 1872..3657 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17009654..17011524 | 1..1871 | 100 | -> | Plus |
3L | 17011585..17013370 | 1872..3657 | 100 | Plus |
Translation from 85 to 3564
> LD38375.pep MADDAGQDKRKQHRARQSGVKADKKKLKAKKDSNQKEPELTARQRNPKAF AINSAQRAERNFRRKEDLTAKKQHIPVVDQTPNVPPPVLIAVVGPPKVGK TTLIKDLIKSFTRTNVTDIKGPITIVTSKKRRITLLECNNDVNSMIDVAK CADLVLLLCDASYGFEMEIFEFLNICQVHGMPKIMGVLTHLDMIKNPKQL RKRKKELKHRFWTEVYDGAKLFYLSGLLHGEYLRNEVKNLGRFISVMKFR PLQWRGAHSYLLVDRIEDVTNTDRVRRDPKCDREVVLYGYVRGVPLKQEH MVHIAGLGDARIDELNVIPDPCPLPGTEKKRSLLEKERLLYAPMSGVGGI VYDKDAVYIELQGSHSHKEQEQTAEAAEQAELVNKLIDKKATIDEQMEQQ EFRLFSDAKPIKSKDFRNDQDDEEEDEEAESSENEDDDGEDSGLDAADSE EEQQDEFDADDWRGENSEEEEDAEEDASSGDEEYQSLGNVKTSNESDSDD EEARVLASNMSWKTNLAQKARDAFLQRHSESKNLMRLVYGVYNQSEHSRQ EAEAEDDSEEELGGLFRVAAKKQSLKQSDQDIRDKDERCFFEYQGDATRD WLAEDNKELIKNCFVTGKWKASEDAENLLKMDDMSDAESEVYGDFEDLET GEQHSGKPKAEDGGESEEENSKPEDSSAPKRKLTRVEEENLTKAELMAKK LKLKAKFDAEYDNSGEGKGEEDNGRITGDHSFYEDLKAEAQRQSELNKSE FAHLDNEFRIQIEGYRPGLYVRLGFKQLPAEFIENFDASYPVLVGALNMT EENVGYVNCKVKKHRWYKKILKTGDPLIISMGWRRFQTVAIYAKVEDNFR QRYLKYTPNHVTCSMTFWGPITPQNTGFLALQTVRQDQEEMRRLGFRIAA TGCVTEVDKSSQIMKKLKLVGHPFKIYKKTAFVKDMFNSSLEVAKFEGAK IKTVSGIRGQIKKAHHTPEGSYRATFEDKILLSDIVFCRTWFRVEVPRFY APVSSLLLPLDQKSQWQGMKTLGQLKRERAVQNAAQPDSMYTTIVRKEKI FRPLTIPKALQRALPYKDKPKLGPENPKAALERVAVVNSPYEQKVSKMMK MIETNFKDKRQRERMEMKKRIKNYREKKREKMASQERRQKELRKKVSRAI SKLRGKQTA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23950-PA | 1157 | GF23950-PA | 1..1157 | 1..1159 | 5399 | 90.4 | Plus |
Dana\GF10278-PA | 816 | GF10278-PA | 553..781 | 761..994 | 205 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13598-PA | 1160 | GG13598-PA | 1..1159 | 1..1159 | 5990 | 96.5 | Plus |
Dere\GG16177-PA | 815 | GG16177-PA | 552..780 | 761..994 | 201 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14499-PA | 1169 | GH14499-PA | 1..1166 | 1..1156 | 5186 | 84.7 | Plus |
Dgri\GH23487-PA | 101 | GH23487-PA | 1..98 | 1059..1156 | 368 | 74.5 | Plus |
Dgri\GH14918-PA | 815 | GH14918-PA | 548..776 | 761..994 | 197 | 24.5 | Plus |
Dgri\GH23691-PA | 62 | GH23691-PA | 1..59 | 1098..1156 | 172 | 64.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7728-PA | 1159 | CG7728-PA | 1..1159 | 1..1159 | 6006 | 100 | Plus |
l(2)01289-PG | 1191 | CG9432-PG | 746..985 | 414..684 | 186 | 21.7 | Plus |
l(2)01289-PM | 1193 | CG9432-PM | 746..985 | 414..684 | 186 | 21.7 | Plus |
Tsr1-PA | 814 | CG7338-PA | 551..779 | 761..994 | 178 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13274-PA | 1155 | GI13274-PA | 1..1152 | 1..1156 | 5076 | 84.1 | Plus |
Dmoj\GI12015-PA | 809 | GI12015-PA | 542..770 | 761..994 | 211 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16191-PA | 1164 | GL16191-PA | 1..1163 | 1..1158 | 5283 | 86.8 | Plus |
Dper\GL24682-PA | 815 | GL24682-PA | 551..778 | 762..994 | 200 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20548-PA | 1164 | GA20548-PA | 1..1163 | 1..1158 | 5292 | 87 | Plus |
Dpse\GA20274-PA | 815 | GA20274-PA | 551..778 | 762..994 | 201 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25680-PA | 1116 | GM25680-PA | 1..1116 | 1..1159 | 5828 | 94.6 | Plus |
Dsec\GM13212-PA | 224 | GM13212-PA | 1..224 | 936..1159 | 1169 | 98.2 | Plus |
Dsec\GM22361-PA | 814 | GM22361-PA | 551..779 | 761..994 | 196 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14685-PA | 1161 | GD14685-PA | 1..1161 | 1..1159 | 6131 | 98.4 | Plus |
Dsim\GD14952-PA | 814 | GD14952-PA | 551..779 | 761..994 | 198 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12043-PA | 1159 | GJ12043-PA | 1..1156 | 1..1156 | 5233 | 86 | Plus |
Dvir\GJ13284-PA | 814 | GJ13284-PA | 547..775 | 761..994 | 201 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20458-PA | 1160 | GK20458-PA | 1..1160 | 1..1159 | 5113 | 84.4 | Plus |
Dwil\GK12216-PA | 806 | GK12216-PA | 545..773 | 761..994 | 204 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19894-PA | 1159 | GE19894-PA | 1..1159 | 1..1159 | 6042 | 97.3 | Plus |
Dyak\GE19748-PA | 816 | GE19748-PA | 553..781 | 761..994 | 199 | 25.3 | Plus |
Dyak\GE19745-PA | 816 | GE19745-PA | 553..781 | 761..994 | 199 | 25.3 | Plus |
Translation from 85 to 3564
> LD38375.hyp MADDAGQDKRKQHRARQSGVKADKKKLKAKKDSNQKEPELTARQRNPKAF AINSAQRAERNFRRKEDLTAKKQHIPVVDQTPNVPPPVLIAVVGPPKVGK TTLIKDLIKSFTRTNVTDIKGPITIVTSKKRRITLLECNNDVNSMIDVAK CADLVLLLCDASYGFEMEIFEFLNICQVHGMPKIMGVLTHLDMIKNPKQL RKRKKELKHRFWTEVYDGAKLFYLSGLLHGEYLRNEVKNLGRFISVMKFR PLQWRGAHSYLLVDRIEDVTNTDRVRRDPKCDREVVLYGYVRGVPLKQEH MVHIAGLGDARIDELNVIPDPCPLPGTEKKRSLLEKERLLYAPMSGVGGI VYDKDAVYIELQGSHSHKEQEQTAEAAEQAELVNKLIDKKATIDEQMEQQ EFRLFSDAKPIKSKDFRNDQDDEEEDEEAESSENEDDDGEDSGLDAADSE EEQQDEFDADDWRGENSEEEEDAEEDASSGDEEYQSLGNVKTSNESDSDD EEARVLASNMSWKTNLAQKARDAFLQRHSESKNLMRLVYGVYNQSEHSRQ EAEAEDDSEEELGGLFRVAAKKQSLKQSDQDIRDKDERCFFEYQGDATRD WLAEDNKELIKNCFVTGKWKASEDAENLLKMDDMSDAESEVYGDFEDLET GEQHSGKPKAEDGGESEEENSKPEDSSAPKRKLTRVEEENLTKAELMAKK LKLKAKFDAEYDNSGEGKGEEDNGRITGDHSFYEDLKAEAQRQSELNKSE FAHLDNEFRIQIEGYRPGLYVRLGFKQLPAEFIENFDASYPVLVGALNMT EENVGYVNCKVKKHRWYKKILKTGDPLIISMGWRRFQTVAIYAKVEDNFR QRYLKYTPNHVTCSMTFWGPITPQNTGFLALQTVRQDQEEMRRLGFRIAA TGCVTEVDKSSQIMKKLKLVGHPFKIYKKTAFVKDMFNSSLEVAKFEGAK IKTVSGIRGQIKKAHHTPEGSYRATFEDKILLSDIVFCRTWFRVEVPRFY APVSSLLLPLDQKSQWQGMKTLGQLKRERAVQNAAQPDSMYTTIVRKEKI FRPLTIPKALQRALPYKDKPKLGPENPKAALERVAVVNSPYEQKVSKMMK MIETNFKDKRQRERMEMKKRIKNYREKKREKMASQERRQKELRKKVSRAI SKLRGKQTA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7728-PA | 1159 | CG7728-PA | 1..1159 | 1..1159 | 6006 | 100 | Plus |
l(2)01289-PG | 1191 | CG9432-PG | 746..985 | 414..684 | 186 | 21.7 | Plus |
l(2)01289-PM | 1193 | CG9432-PM | 746..985 | 414..684 | 186 | 21.7 | Plus |
CG7338-PA | 814 | CG7338-PA | 551..779 | 761..994 | 178 | 25.7 | Plus |