BDGP Sequence Production Resources |
Search the DGRC for LD38433
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 384 |
Well: | 33 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5112-RA |
Protein status: | LD38433.pep: gold |
Preliminary Size: | 1943 |
Sequenced Size: | 1798 |
Gene | Date | Evidence |
---|---|---|
CG5112 | 2001-09-19 | Blastp of sequenced clone |
CG5112 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5112 | 2008-04-29 | Release 5.5 accounting |
CG5112 | 2008-08-15 | Release 5.9 accounting |
CG5112 | 2008-12-18 | 5.12 accounting |
1798 bp (1798 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058674
> LD38433.complete CTCGGTTTCAGTTTGCATATGCATTGCGCAAAGTGCAAATCTCATCAGAA ATTGGAAGCGGCGTCATCATGTCATTTTGGAGCCACGTACTTGATGCCCT GCTGGCACTGGTCCACATCCTGAGCGATCGCCTGCTGGAGTTCGTACTGG ACTGGTATTTGGGCGAGCACAAGCGGGTATCGGGTCCACCGAGCCTGGAA CAGCAGACGACGATTACGAAGAGCGCTGTGGAGTTGGCGCAACAGATACG GGAACGCAGGCAGCGCAGTTACGACATAGTCAAGGCCTACTGTGAGCGAA TCGAGAGCGTTAATCGGGATCTCAATGCGGTGGTCGATGGCCCGTTTCCG GAGGCCTTGGACCAGGCACGCGAAATCGATCGCAAGTTGGACGAAAAGGA GTACAGCGATGAGGATCTGCGGCGCCTGCCCTTCCTAGGCGTACCCTTCT CCACCAAGGATAGCACCGCTGTGGCTGGGAGGCTACACACACTGGGCCTG CTAGCAAGGAAATCGGAACGTTCGACCACGGATGCGGAATGCGTGCGCCT GATGAAGGAAAGTGGCGCCATTATCATCGCCACCAGCAATGTGCCGGAGG TGAACAAGTGGATTGAGTCGAGGAACATGCTAATCGGCTGCACCAACAAT CCCTACGATCTGCGGCGTTCCGTCGGCGGTTCTTCGGGTGGTGAAGCCGC TCTGATCGCTGCCTGCTGCACGGGTTTTGGTTTGGGAACAGACATTGGTG GTTCCATACGCATACCGGCCTTCAATTGCGGCATCTTCGGGCACAAACCC ACTTCCGGTGCGGTCAATATGGCCGGATGTACGTTCAGAACGGGCAAGGA AAAGGATACGATGGTATGTGCCGGTCCAATGAGTCGTTCTGCGCGGGATC TACTGCCCATGATGCAGGTTCTGGTGGAGCCATCGTTGAAAGCCAAGCTA AAACTGGATCAGAAGGTGGATCTGAAGCGGCTGCGTTACTTCTATGTGTC CTCCAATGGCATGGCTCAGTGCAATCCTATTAACCGGGAAACCGAACGGG TTATGTACAAGATTCGCAAACATTTCGAGGCAGTGAGTGGAAAGGACGTG CGGCACGCTGACTTGCCCTATACCAAGCTGACCGGAAAGATGTGGCGCTA TTGGATGACCCAGGAACCGGCCAACTTCAATCTGCTGTTGGGCAATGGCG CCGAGCTCAATCCATTTGTGGAGCTCTTCAAGAAGATACTGGGGCAAAGT GACTACAGCATGGCGGCCATTTATGGTCTGATCGACAGTGTGCTGCCCAA GGAAAAGGAGAAGCTGATGAGGGAAGCCACGGCCAAGTGCAAGAAGTCCG TCCAGGACTTGCTCGGCGACGATGGTGTGCTGTTCTTTCACAGTTCTCCC AGGACTGCACCATTCCACTACTATCCTCTGGTCAAGTTCAATGACTTCGC GTACTTCAGCCTCTTCAATGTGCTCCACTTGCCGGCCACCCAGGTGCCCA TGGGTCTGGACTCCAAGGGCATGCCGCTGGGCATCCAAGTGGTGGCCAAT CCGAACAACGATCGCCTTTGCCTGGCGGTTGCCGAGGAACTGGAGCGCAC TTTTGGCGGCTGGGTGCCTCCATTTCCGCTGAAGAACTAGATGGTTTATG ATGTATGATCGATCAACTTATTGTTAGAGAACATAGGGTGTGGGTAACGC TGAAGACTGTCGCTTTTATTTATTACTTTTATTACAGGATATAAATAAAT TGGCTATCTTTTTTAACTGCTTGAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5112-RA | 1774 | CG5112-RA | 1..1774 | 1..1774 | 8870 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 21314617..21316389 | 1..1773 | 8850 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 25491490..25493263 | 1..1774 | 8870 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 25232321..25234094 | 1..1774 | 8870 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21314617..21316389 | 1..1773 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5112-RA | 1..1572 | 69..1640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5112-RA | 1..1572 | 69..1640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5112-RA | 1..1572 | 69..1640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5112-RA | 1..1572 | 69..1640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5112-RA | 1..1572 | 69..1640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5112-RA | 1..1773 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5112-RA | 1..1773 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5112-RA | 31..1803 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5112-RA | 1..1773 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5112-RA | 31..1803 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25491490..25493262 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25491490..25493262 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25491490..25493262 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21317212..21318984 | 1..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25232321..25234093 | 1..1773 | 100 | Plus |
Translation from 2 to 1639
> LD38433.hyp RFQFAYALRKVQISSEIGSGVIMSFWSHVLDALLALVHILSDRLLEFVLD WYLGEHKRVSGPPSLEQQTTITKSAVELAQQIRERRQRSYDIVKAYCERI ESVNRDLNAVVDGPFPEALDQAREIDRKLDEKEYSDEDLRRLPFLGVPFS TKDSTAVAGRLHTLGLLARKSERSTTDAECVRLMKESGAIIIATSNVPEV NKWIESRNMLIGCTNNPYDLRRSVGGSSGGEAALIAACCTGFGLGTDIGG SIRIPAFNCGIFGHKPTSGAVNMAGCTFRTGKEKDTMVCAGPMSRSARDL LPMMQVLVEPSLKAKLKLDQKVDLKRLRYFYVSSNGMAQCNPINRETERV MYKIRKHFEAVSGKDVRHADLPYTKLTGKMWRYWMTQEPANFNLLLGNGA ELNPFVELFKKILGQSDYSMAAIYGLIDSVLPKEKEKLMREATAKCKKSV QDLLGDDGVLFFHSSPRTAPFHYYPLVKFNDFAYFSLFNVLHLPATQVPM GLDSKGMPLGIQVVANPNNDRLCLAVAEELERTFGGWVPPFPLKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5112-PA | 523 | CG5112-PA | 1..523 | 23..545 | 2733 | 100 | Plus |
CG8839-PE | 529 | CG8839-PE | 23..525 | 45..540 | 873 | 40.2 | Plus |
CG8839-PA | 529 | CG8839-PA | 23..525 | 45..540 | 873 | 40.2 | Plus |
CG8839-PC | 529 | CG8839-PC | 23..525 | 45..540 | 873 | 40.2 | Plus |
CG8839-PD | 529 | CG8839-PD | 23..525 | 45..540 | 873 | 40.2 | Plus |
Translation from 68 to 1639
> LD38433.pep MSFWSHVLDALLALVHILSDRLLEFVLDWYLGEHKRVSGPPSLEQQTTIT KSAVELAQQIRERRQRSYDIVKAYCERIESVNRDLNAVVDGPFPEALDQA REIDRKLDEKEYSDEDLRRLPFLGVPFSTKDSTAVAGRLHTLGLLARKSE RSTTDAECVRLMKESGAIIIATSNVPEVNKWIESRNMLIGCTNNPYDLRR SVGGSSGGEAALIAACCTGFGLGTDIGGSIRIPAFNCGIFGHKPTSGAVN MAGCTFRTGKEKDTMVCAGPMSRSARDLLPMMQVLVEPSLKAKLKLDQKV DLKRLRYFYVSSNGMAQCNPINRETERVMYKIRKHFEAVSGKDVRHADLP YTKLTGKMWRYWMTQEPANFNLLLGNGAELNPFVELFKKILGQSDYSMAA IYGLIDSVLPKEKEKLMREATAKCKKSVQDLLGDDGVLFFHSSPRTAPFH YYPLVKFNDFAYFSLFNVLHLPATQVPMGLDSKGMPLGIQVVANPNNDRL CLAVAEELERTFGGWVPPFPLKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17696-PA | 523 | GF17696-PA | 1..523 | 1..523 | 2487 | 88.7 | Plus |
Dana\GF12071-PA | 531 | GF12071-PA | 48..527 | 49..518 | 871 | 40.1 | Plus |
Dana\GF16679-PA | 528 | GF16679-PA | 10..512 | 25..518 | 708 | 35 | Plus |
Dana\GF16723-PA | 542 | GF16723-PA | 5..529 | 8..520 | 689 | 35.4 | Plus |
Dana\GF16973-PA | 534 | GF16973-PA | 5..527 | 1..520 | 674 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11409-PA | 523 | GG11409-PA | 1..523 | 1..523 | 2658 | 93.3 | Plus |
Dere\GG22587-PA | 529 | GG22587-PA | 1..525 | 1..518 | 869 | 38.7 | Plus |
Dere\GG23956-PA | 528 | GG23956-PA | 10..512 | 25..518 | 717 | 35.4 | Plus |
Dere\GG23111-PA | 536 | GG23111-PA | 1..531 | 1..520 | 692 | 35.9 | Plus |
Dere\GG23077-PA | 530 | GG23077-PA | 1..527 | 1..520 | 666 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18979-PA | 523 | GH18979-PA | 1..523 | 1..523 | 2189 | 75.7 | Plus |
Dgri\GH22975-PA | 535 | GH22975-PA | 53..531 | 49..518 | 880 | 40.7 | Plus |
Dgri\GH14157-PA | 528 | GH14157-PA | 10..512 | 25..518 | 704 | 35 | Plus |
Dgri\GH18322-PA | 535 | GH18322-PA | 7..531 | 11..521 | 679 | 32.9 | Plus |
Dgri\GH18321-PA | 536 | GH18321-PA | 15..527 | 15..520 | 657 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5112-PA | 523 | CG5112-PA | 1..523 | 1..523 | 2733 | 100 | Plus |
CG8839-PE | 529 | CG8839-PE | 23..525 | 23..518 | 873 | 40.2 | Plus |
CG8839-PA | 529 | CG8839-PA | 23..525 | 23..518 | 873 | 40.2 | Plus |
CG8839-PC | 529 | CG8839-PC | 23..525 | 23..518 | 873 | 40.2 | Plus |
CG8839-PD | 529 | CG8839-PD | 23..525 | 23..518 | 873 | 40.2 | Plus |
CG7900-PB | 536 | CG7900-PB | 1..531 | 1..520 | 710 | 34.1 | Plus |
CG5191-PB | 552 | CG5191-PB | 12..536 | 6..518 | 689 | 34 | Plus |
CG5191-PF | 528 | CG5191-PF | 11..512 | 26..518 | 687 | 34.7 | Plus |
CG5191-PC | 528 | CG5191-PC | 11..512 | 26..518 | 687 | 34.7 | Plus |
CG5191-PE | 528 | CG5191-PE | 11..512 | 26..518 | 687 | 34.7 | Plus |
CG7910-PB | 530 | CG7910-PB | 7..527 | 7..520 | 653 | 33.8 | Plus |
CG7910-PA | 530 | CG7910-PA | 7..527 | 7..520 | 653 | 33.8 | Plus |
CG5191-PD | 429 | CG5191-PD | 14..413 | 121..518 | 567 | 35.1 | Plus |
CG5191-PA | 429 | CG5191-PA | 14..413 | 121..518 | 567 | 35.1 | Plus |
GatA-PA | 508 | CG6007-PA | 38..490 | 83..509 | 207 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22405-PA | 525 | GI22405-PA | 1..524 | 1..523 | 2144 | 76.7 | Plus |
Dmoj\GI18460-PA | 534 | GI18460-PA | 52..530 | 49..518 | 865 | 40.9 | Plus |
Dmoj\GI22238-PA | 528 | GI22238-PA | 10..512 | 25..518 | 706 | 35.2 | Plus |
Dmoj\GI23303-PA | 534 | GI23303-PA | 28..526 | 29..515 | 655 | 36.8 | Plus |
Dmoj\GI23302-PA | 540 | GI23302-PA | 20..525 | 20..518 | 628 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22143-PA | 525 | GL22143-PA | 1..525 | 1..523 | 2381 | 84.6 | Plus |
Dper\GL11255-PA | 528 | GL11255-PA | 46..524 | 49..518 | 888 | 41 | Plus |
Dper\GL23753-PA | 533 | GL23753-PA | 6..527 | 21..520 | 678 | 33.8 | Plus |
Dper\GL13563-PA | 530 | GL13563-PA | 10..495 | 25..518 | 648 | 33.5 | Plus |
Dper\GL23754-PA | 402 | GL23754-PA | 109..397 | 244..520 | 316 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18668-PA | 525 | GA18668-PA | 1..525 | 1..523 | 2383 | 84.6 | Plus |
Dpse\GA21360-PA | 528 | GA21360-PA | 46..524 | 49..518 | 888 | 41 | Plus |
Dpse\GA20671-PA | 533 | GA20671-PA | 4..528 | 3..520 | 693 | 35 | Plus |
Dpse\GA20678-PA | 533 | GA20678-PA | 6..527 | 21..520 | 680 | 33.8 | Plus |
Dpse\GA18724-PB | 488 | GA18724-PB | 2..457 | 66..518 | 671 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10248-PA | 523 | GM10248-PA | 1..523 | 1..523 | 2754 | 97.7 | Plus |
Dsec\GM20367-PA | 529 | GM20367-PA | 23..525 | 23..518 | 873 | 40 | Plus |
Dsec\GM23118-PA | 528 | GM23118-PA | 10..512 | 25..518 | 709 | 35.5 | Plus |
Dsec\GM23702-PA | 536 | GM23702-PA | 1..531 | 1..520 | 699 | 34.9 | Plus |
Dsec\GM23701-PA | 530 | GM23701-PA | 1..527 | 1..520 | 661 | 33.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21221-PA | 523 | GD21221-PA | 1..523 | 1..523 | 2755 | 97.7 | Plus |
Dsim\GD25848-PA | 529 | GD25848-PA | 23..525 | 23..518 | 878 | 40.2 | Plus |
Dsim\GD18512-PA | 536 | GD18512-PA | 1..531 | 1..520 | 698 | 35.2 | Plus |
Dsim\GD19357-PA | 522 | GD19357-PA | 10..506 | 25..518 | 680 | 34.8 | Plus |
Dsim\GD18511-PA | 530 | GD18511-PA | 1..527 | 1..520 | 664 | 33.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10965-PA | 524 | GJ10965-PA | 1..523 | 1..522 | 2264 | 78.4 | Plus |
Dvir\GJ21547-PA | 534 | GJ21547-PA | 52..530 | 49..518 | 842 | 39.7 | Plus |
Dvir\GJ23043-PA | 528 | GJ23043-PA | 10..512 | 25..518 | 707 | 35.2 | Plus |
Dvir\GJ24159-PA | 530 | GJ24159-PA | 22..524 | 23..518 | 668 | 34 | Plus |
Dvir\GJ24158-PA | 536 | GJ24158-PA | 1..525 | 1..518 | 655 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12847-PA | 523 | GK12847-PA | 1..523 | 1..523 | 2224 | 76.9 | Plus |
Dwil\GK22129-PA | 525 | GK22129-PA | 42..520 | 49..518 | 902 | 41.8 | Plus |
Dwil\GK22453-PA | 533 | GK22453-PA | 10..512 | 25..518 | 703 | 34.8 | Plus |
Dwil\GK14375-PA | 534 | GK14375-PA | 42..527 | 49..520 | 687 | 34.3 | Plus |
Dwil\GK14376-PA | 533 | GK14376-PA | 33..528 | 36..520 | 664 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23605-PA | 523 | GE23605-PA | 1..523 | 1..523 | 2712 | 95.8 | Plus |
Dyak\GE13457-PA | 529 | GE13457-PA | 1..525 | 1..518 | 860 | 38.5 | Plus |
Dyak\GE25669-PA | 528 | GE25669-PA | 10..512 | 25..518 | 707 | 35.2 | Plus |
Dyak\GE25848-PA | 536 | GE25848-PA | 1..531 | 1..520 | 682 | 35.7 | Plus |
Dyak\GE25847-PA | 530 | GE25847-PA | 1..527 | 1..520 | 669 | 33.5 | Plus |