Clone LD38452 Report

Search the DGRC for LD38452

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:384
Well:52
Vector:pOT2
Associated Gene/TranscriptBtbVII-RA
Protein status:LD38452.pep: gold
Preliminary Size:3555
Sequenced Size:3310

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11494 2001-07-04 Blastp of sequenced clone
CG11494 2003-01-01 Sim4 clustering to Release 3
BtbVII 2008-04-29 Release 5.5 accounting
BtbVII 2008-08-15 Release 5.9 accounting
BtbVII 2008-12-18 5.12 accounting

Clone Sequence Records

LD38452.complete Sequence

3310 bp (3310 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051895

> LD38452.complete
AAAGAAGTAAAACTGACTCGCGATGCGTGCGGCATAGAAGTCGTCGCCCC
CCAAAAAACCGTGATCCCGACCCCCCACACGCACACACACATGTACAGAC
TGCGATTGTTCATAAATTTAAATTGATTAAAAGTCGGAGCGAAAAAGTAA
AGCGAACAAAACACCGGAAAGCAAGGAAAATTAATAAAAATCAATAGAGG
CGAGCGGGAGGCGATAAAAAGTGTTATCAGTGCGAATTAATTGGCTACGA
AGAAGGAAAGAAGCAGGAGGCGGAGGAGCGGGAGCAGGAGGAGGAGGTTG
CTCCGGAGATTGAGGTTTAGGGAGCTCCAAATCCGCATCCCGGACGCGGA
TCCGGACCCCTCGACATCATGTCCGTGCAGCAGTTCTGCCTGCGGTGGAA
CAACCACCAGCCGAACTTCATCTCCGTGTGCTCCTCGCTGCTGCACAATG
GCACCCTGGTGGACGTCACCCTGGCAGCCGAGGGTCGCCAACTACAGGCC
CACAAAATAGTGCTATCCGCCTGCAGCTCGTACTTTCAGGCTTTGTTCAC
CACAAATCCGTGCCAACATCCCATTGTCATCCTGAAGGACGTGCAGTACG
ATGACCTAAAGACCATGGTGGACTTTATGTACTACGGCGAGGTAAATGTG
TCGCAGGAGCAGCTGCCGCACATCCTCAAGACCGCCGAGATGCTCAAGAT
CAAAGGCCTAGCGGAGATGCCAACGGATCCGGCCAATCTTACCAAGTCGG
ATAGCAAGTCCTCCACCGACGGCACCGAGATGGTGGGCGGTGCGGGAGTG
GGCACTGGAGCGGGCAACTCGGCTGGCAGCCTGGGAGCCGGCAGTGGAAG
CAGCGTCGGCGACTCCCTGTGGAGCAGCAGCGAGGCCCAACAGTTCCAGC
AGCAGCAGCAACAGCAGGCCCAGCAACAGGCACAGCAGCAGCACCATCAC
CACCAGCAGCAGCAGCAGTTGCAGCAGCAACAACAACAGGCGCAGCAGCA
GCAACAACAGCAGCAGCACCATCACCACCACCATCAGCAGCAGCAGAGCG
GACAGGCGCAGGCGGCGCAGACGCATCACCACCAGATGCGACGTACGCCG
TCGCCTTTGAGCGCTGGAACCTCGCCGGCCACCAGGCGCAAGCGCTTGCG
CAAATCCTCGAATAACGGTTCTGGCGATCGCAACAACGCGGAGGAGCAGC
ACAACAGCTCACTGGACGCGGGCAGTGGTGCCGGCAACGCCGGTCTCAGT
CTCGCCCAGATGAACCAGATGACATTTGGTGCGGGCGGCGGCTTGGCCGG
CCACTCACTGCACGCGGCTAAGCTGCTCAAGGAGTCGGCCAGCGCTGAGC
TAGAGCAGCAGCCGCAGGACTCGGATCTTGACGATGGACACGGACACTTA
CACATGCAAATTAAGCCCGAAGTCGACATTGGCGGCGTGAACCAAACGAT
GCCCTTGGACATCTCCGGCGGTACCACACCATCCGAGCACGATGCGCCGA
ACTCCCAGTCCTCGCACTCGGGTCTGCAATGGACAGTTGTTGATTCCAAC
TATCCGCGCTTCTCCCTGCCCGCCTGCCAGTCCAACTTGTTGGGCAACGG
CGGAGGCAGCGGTGGTGGTGCCGGTAGCCAGAGCAGTGGTGCGAATAGCG
CCGGCGGCGTCAATAGCGATCAGCGGCAGCAGCACGAAGCCCAGCAGCAG
GCCACGCAACAGCAGCAGCATCTGCAGCAGCTGCACTACCAGCAGCAGCA
ACAGCAGGAGCAGGCCTCTGCCTCCGGACAGGCCTACTCGTCGCAGATCA
TTACCGTGAACAACCTAGTCGGAAGCTATGCGACGGCGGCCCAGAACCTT
TCGCCCACCTCGCCCAATGAATCAAACATGGTGCAATCGGTCTACAGTCA
GGGTCCGACGCCCACCCAATCCCCCGTGCACGCAGGAGTCGGTGGAGCAA
GTGCGGCTGGCGGAGCAGCGGGCAATGCCAGTGCTGGAAACGGTGGAGCC
CCTGGAGCGGCCAACCAGGTGGTGAAGCGCAAGAGATCGGTGAATCCGCA
GGGAGACGAAAACTTTATCCGAGCCCTGGAGGCGGTACGCACGGGAGGTA
TCGGATTCTGCAAGGCGGCACGACTTTACGGAGTGAACAACAGGACACTC
TGGCTGGAATACAAAAAGCGTGGCTATCCGGTGTCACGTCCCAGCATAAA
AGCGCGTGTGGTCAAACAGGAGCCGAATCTGTCGCCCTCGCCGACGCCAT
CGACGAATCAGGGCGATGACAACACCAACGAAACGCTCGGCATGCAGATA
CCACCACAGGCGGAGACTCCGACACCTTCGCTCATGTGCACATCGCACCA
CACTGGCCTGGGAAGCGGAGCTGGAAGTTTGCCGGCCGGAGGAAACTCGC
ACCCAGCGATCGGGGTGATGAGCCTGTTCGATCCTCGATACATGGATTCG
CCCGGCAATGTGCACTCGATGACGCGGCAGCGTTACATCGAAGCCACCGG
CGGCGGAGCAGGTGCGGGAACGGGCGCAGGCACCGGCACCATCAACGTTA
ATCCGACCACCGCCATGAATCTACAGAGTATTAACTTCAACTCAATATAG
AATACGATTTCGAGCCAGGCGGGGACGGCCACTCTGCTCCAGGCAGCCGC
CGTAATGGCCGCCAGCGAGCCAGCGGAATCCCTGAGCATATCAGCCATGC
CCGTCTCCGTTCCAATGGGCATGGCGCACAGTTTCCTCATCAACAACTTC
GTAACGGTGGCTGCACCGCCGGTGGCCACGGTGACCAGCACGGGCCTGCA
GTACTTGGACAAGTCGTAGGTCCGGACACCGAGCCCCCAAATTGATCGAT
ACAGGTATTAGAGAAACGGCAGCAATCTACTGTATATATAGCGGACCGCT
TGTACGGCACAGTGGCAATATATGCAGCGATATATGCCGACCCAGGATGG
CACAGAAGTGGAATCGGATTCCTGCGCTGAGCTGAGCTGAGCTAAGCGAA
GCAGGAGGATCGCAAGGAAGTGAGGCGGAAGTGAACGGCGAGGAGCGAAG
CGAGTTAAGAGAGCAGGCAAGCCGGCCGCACTTGTAATAATACTTTCATA
GAACCTAATTCCTTGAGCTAAACGTTTTGAACCCTACATTTTTACGATTG
TTAACTAAGAAATCGGTAGTGCAGATCTTCGATATACATACATATATATA
TATATATATAGCTATATAGCTATATTACGTGTAAAAGAATAATGTAATTG
TACATAAATTATAAAATTTTATTAGTGTTAATCGCGAACATCAAAAAAAA
AAAAAAAAAA

LD38452.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:29:39
Subject Length Description Subject Range Query Range Score Percent Strand
BtbVII-RA 3943 BtbVII-RA 60..3354 1..3295 16475 100 Plus
BtbVII.h 4829 BtbVII.h 60..3354 1..3295 16475 100 Plus
BtbVII.b 3348 BtbVII.b 70..3348 14..3292 16395 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 3151893..3153664 1521..3292 8740 99.5 Plus
chr3L 24539361 chr3L 3149647..3150279 537..1169 3135 99.7 Plus
chr3L 24539361 chr3L 3149063..3149589 14..540 2635 100 Plus
chr3L 24539361 chr3L 3150362..3150607 1167..1412 1200 99.2 Plus
chr3L 24539361 chr3L 3150699..3150809 1413..1523 555 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:33:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:35:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3152454..3154228 1521..3295 8875 100 Plus
3L 28110227 3L 3150212..3150844 537..1169 3165 100 Plus
3L 28110227 3L 3149628..3150154 14..540 2635 100 Plus
3L 28110227 3L 3150927..3151172 1167..1412 1230 100 Plus
3L 28110227 3L 3151264..3151374 1413..1523 555 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 3152454..3154228 1521..3295 8875 100 Plus
3L 28103327 3L 3150212..3150844 537..1169 3165 100 Plus
3L 28103327 3L 3149628..3150154 14..540 2635 100 Plus
3L 28103327 3L 3150927..3151172 1167..1412 1230 100 Plus
3L 28103327 3L 3151264..3151374 1413..1523 555 100 Plus
3L 28103327 3L 7757895..7758005 1046..936 240 81 Minus
2R 25260384 2R 21150790..21150935 1042..897 235 77.3 Minus
2R 25260384 2R 21150762..21150908 1043..897 225 76.8 Minus
X 23527363 X 12723127..12723231 1046..942 225 80.9 Minus
3L 28103327 3L 7154613..7154702 1046..957 210 82.2 Minus
2R 25260384 2R 18282395..18282466 1042..971 210 86.1 Minus
X 23527363 X 9065266..9065376 1046..936 210 79.2 Minus
3L 28103327 3L 9830445..9830518 1045..972 205 85.1 Minus
3L 28103327 3L 18773117..18773226 1042..933 205 79 Minus
2R 25260384 2R 21150820..21150929 1045..936 205 79 Minus
3R 31820162 3R 7016044..7016135 1039..948 205 81.5 Minus
2R 25260384 2R 21222738..21222791 1045..992 195 90.7 Minus
X 23527363 X 21318346..21318470 1046..919 195 78.1 Minus
Blast to na_te.dros performed 2019-03-16 05:35:14
Subject Length Description Subject Range Query Range Score Percent Strand
R1A1-element 5356 R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). 564..778 1752..1541 140 53.7 Minus
R1A1-element 5356 R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). 607..746 1698..1561 139 59 Minus
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 1138..1262 3282..3155 127 61.8 Minus

LD38452.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:35:54 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 3149650..3150006 540..896 99 == Plus
chr3L 3150157..3150277 1047..1167 100 -> Plus
chr3L 3150363..3150607 1168..1412 99 -> Plus
chr3L 3150699..3150807 1413..1521 100 -> Plus
chr3L 3151894..3151964 1522..1592 100 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:20:43 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
BtbVII-RB 1..2232 369..2600 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:17:27 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
BtbVII-RB 1..2232 369..2600 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:11:42 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
BtbVII-RG 1..2451 369..2819 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:48:57 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
BtbVII-RB 1..2232 369..2600 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:08:14 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
BtbVII-RG 1..2451 369..2819 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:12:14 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
BtbVII-RA 1..3292 1..3292 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:17:27 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
BtbVII-RA 1..3292 1..3292 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:11:42 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
BtbVII-RA 30..3321 1..3292 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:48:57 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
BtbVII-RA 1..3292 1..3292 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:08:14 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
BtbVII-RA 30..3321 1..3292 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:35:54 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3149628..3150153 14..539 100 -> Plus
3L 3150215..3150842 540..1167 100 -> Plus
3L 3150928..3151172 1168..1412 100 -> Plus
3L 3151264..3151372 1413..1521 100 -> Plus
3L 3152455..3154225 1522..3292 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:35:54 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3149628..3150153 14..539 100 -> Plus
3L 3150215..3150842 540..1167 100 -> Plus
3L 3150928..3151172 1168..1412 100 -> Plus
3L 3151264..3151372 1413..1521 100 -> Plus
3L 3152455..3154225 1522..3292 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:35:54 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3149628..3150153 14..539 100 -> Plus
3L 3150215..3150842 540..1167 100 -> Plus
3L 3150928..3151172 1168..1412 100 -> Plus
3L 3151264..3151372 1413..1521 100 -> Plus
3L 3152455..3154225 1522..3292 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:11:42 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3149628..3150153 14..539 100 -> Plus
arm_3L 3150215..3150842 540..1167 100 -> Plus
arm_3L 3150928..3151172 1168..1412 100 -> Plus
arm_3L 3151264..3151372 1413..1521 100 -> Plus
arm_3L 3152455..3154225 1522..3292 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:27:06 Download gff for LD38452.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3151264..3151372 1413..1521 100 -> Plus
3L 3150928..3151172 1168..1412 100 -> Plus
3L 3149628..3150153 14..539 100 -> Plus
3L 3150215..3150842 540..1167 100 -> Plus
3L 3152455..3154225 1522..3292 100   Plus

LD38452.pep Sequence

Translation from 368 to 2599

> LD38452.pep
MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLS
ACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLP
HILKTAEMLKIKGLAEMPTDPANLTKSDSKSSTDGTEMVGGAGVGTGAGN
SAGSLGAGSGSSVGDSLWSSSEAQQFQQQQQQQAQQQAQQQHHHHQQQQQ
LQQQQQQAQQQQQQQQHHHHHHQQQQSGQAQAAQTHHHQMRRTPSPLSAG
TSPATRRKRLRKSSNNGSGDRNNAEEQHNSSLDAGSGAGNAGLSLAQMNQ
MTFGAGGGLAGHSLHAAKLLKESASAELEQQPQDSDLDDGHGHLHMQIKP
EVDIGGVNQTMPLDISGGTTPSEHDAPNSQSSHSGLQWTVVDSNYPRFSL
PACQSNLLGNGGGSGGGAGSQSSGANSAGGVNSDQRQQHEAQQQATQQQQ
HLQQLHYQQQQQQEQASASGQAYSSQIITVNNLVGSYATAAQNLSPTSPN
ESNMVQSVYSQGPTPTQSPVHAGVGGASAAGGAAGNASAGNGGAPGAANQ
VVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKK
RGYPVSRPSIKARVVKQEPNLSPSPTPSTNQGDDNTNETLGMQIPPQAET
PTPSLMCTSHHTGLGSGAGSLPAGGNSHPAIGVMSLFDPRYMDSPGNVHS
MTRQRYIEATGGGAGAGTGAGTGTINVNPTTAMNLQSINFNSI*

LD38452.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:55:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24270-PA 746 GF24270-PA 472..746 466..743 1135 84.6 Plus
Dana\GF10078-PA 1088 GF10078-PA 196..309 4..117 432 62.3 Plus
Dana\GF22979-PA 648 GF22979-PA 3..122 1..120 426 61.7 Plus
Dana\GF10081-PA 995 GF10081-PA 104..217 4..117 426 59.6 Plus
Dana\GF11096-PA 562 GF11096-PA 5..120 4..119 404 62.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:55:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14906-PA 743 GG14906-PA 1..743 1..743 3857 98.8 Plus
Dere\GG14626-PA 528 GG14626-PA 100..213 4..117 429 59.6 Plus
Dere\GG11824-PA 813 GG11824-PA 3..122 1..120 428 61.7 Plus
Dere\GG14622-PA 1074 GG14622-PA 198..311 4..117 428 61.4 Plus
Dere\GG22728-PA 610 GG22728-PA 5..120 4..119 409 62.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:55:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15390-PA 812 GH15390-PA 1..140 1..140 765 96.4 Plus
Dgri\GH18647-PA 680 GH18647-PA 1..120 1..120 421 60.8 Plus
Dgri\GH15669-PA 517 GH15669-PA 118..229 6..117 415 58.9 Plus
Dgri\GH20621-PA 1032 GH20621-PA 5..117 4..116 403 62.8 Plus
Dgri\GH20847-PA 127 GH20847-PA 4..120 2..118 359 58.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:32
Subject Length Description Subject Range Query Range Score Percent Strand
BtbVII-PG 816 CG43365-PG 1..743 1..743 3884 100 Plus
BtbVII-PE 743 CG43365-PE 1..743 1..743 3884 100 Plus
BtbVII-PD 743 CG43365-PD 1..743 1..743 3884 100 Plus
BtbVII-PB 743 CG11494-PB 1..743 1..743 3884 100 Plus
BtbVII-PA 743 CG11494-PA 1..743 1..743 3884 100 Plus
BtbVII-PI 747 CG43365-PI 1..747 1..743 3869 99.5 Plus
BtbVII-PH 748 CG43365-PH 1..748 1..743 3868 99.3 Plus
BtbVII-PF 907 CG43365-PF 1..579 1..536 2018 72.6 Plus
psq-PN 1043 CG2368-PN 8..344 4..345 433 35.9 Plus
psq-PA 1046 CG2368-PA 8..344 4..345 433 35.9 Plus
psq-PB 1064 CG2368-PB 8..344 4..345 433 35.9 Plus
psq-PC 1064 CG2368-PC 8..344 4..345 433 35.9 Plus
psq-PM 1123 CG2368-PM 8..344 4..345 433 35.9 Plus
lola-PP 963 CG12052-PP 5..571 4..558 416 25.5 Plus
lola-PO 668 CG12052-PO 5..525 4..538 404 26.6 Plus
lola-PI 970 CG12052-PI 5..484 4..484 404 27.1 Plus
lola-PAA 970 CG12052-PAA 5..484 4..484 404 27.1 Plus
lola-PM 465 CG12052-PM 5..322 4..340 403 31.6 Plus
lola-PH 518 CG12052-PH 5..322 4..340 403 31.6 Plus
lola-PK 546 CG12052-PK 5..322 4..340 403 31.6 Plus
lola-PV 549 CG12052-PV 5..322 4..340 403 31.6 Plus
lola-PF 565 CG12052-PF 5..322 4..340 403 31.6 Plus
lola-PU 575 CG12052-PU 5..322 4..340 403 31.6 Plus
lola-PT 575 CG12052-PT 5..322 4..340 403 31.6 Plus
lola-PY 577 CG12052-PY 5..322 4..340 403 31.6 Plus
lola-PX 602 CG12052-PX 5..322 4..340 403 31.6 Plus
lola-PQ 603 CG12052-PQ 5..322 4..340 403 31.6 Plus
lola-PL 608 CG12052-PL 5..322 4..340 403 31.6 Plus
lola-PZ 665 CG12052-PZ 5..322 4..340 403 31.6 Plus
lola-PA 706 CG12052-PA 5..322 4..340 403 31.6 Plus
lola-PE 748 CG12052-PE 5..322 4..340 403 31.6 Plus
lola-PD 748 CG12052-PD 5..322 4..340 403 31.6 Plus
lola-PJ 757 CG12052-PJ 5..322 4..340 403 31.6 Plus
lola-PW 771 CG12052-PW 5..322 4..340 403 31.6 Plus
lola-PB 787 CG12052-PB 5..322 4..340 403 31.6 Plus
lola-PC 787 CG12052-PC 5..322 4..340 403 31.6 Plus
lola-PR 891 CG12052-PR 5..322 4..340 403 31.6 Plus
lola-PG 891 CG12052-PG 5..322 4..340 403 31.6 Plus
CG12236-PB 510 CG12236-PB 3..284 2..258 402 35.7 Plus
CG12236-PA 553 CG12236-PA 3..284 2..258 402 35.7 Plus
bab2-PB 1066 CG9102-PB 196..637 4..460 397 27.8 Plus
ttk-PG 813 CG1856-PG 3..493 1..471 396 27.5 Plus
ttk-PA 813 CG1856-PA 3..493 1..471 396 27.5 Plus
ttk-PB 813 CG1856-PB 3..493 1..471 396 27.5 Plus
ttk-PE 813 CG1856-PE 3..493 1..471 396 27.5 Plus
br-PO 663 CG11491-PO 5..547 4..541 392 24.2 Plus
br-PG 663 CG11491-PG 5..547 4..541 392 24.2 Plus
ttk-PH 643 CG1856-PH 3..139 1..137 391 54.7 Plus
ttk-PD 643 CG1856-PD 3..139 1..137 391 54.7 Plus
ttk-PC 643 CG1856-PC 3..139 1..137 391 54.7 Plus
ttk-PF 643 CG1856-PF 3..139 1..137 391 54.7 Plus
psq-PN 1043 CG2368-PN 545..709 174..311 177 32.1 Plus
psq-PA 1046 CG2368-PA 545..709 174..311 177 32.1 Plus
psq-PB 1064 CG2368-PB 545..709 174..311 177 32.1 Plus
psq-PC 1064 CG2368-PC 545..709 174..311 177 32.1 Plus
psq-PM 1123 CG2368-PM 545..709 174..311 177 32.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12995-PA 794 GI12995-PA 1..176 1..172 776 86.9 Plus
Dmoj\GI12710-PA 1127 GI12710-PA 188..301 4..117 431 62.3 Plus
Dmoj\GI23126-PA 653 GI23126-PA 3..122 1..120 427 61.7 Plus
Dmoj\GI20175-PA 626 GI20175-PA 5..117 4..116 404 62.8 Plus
Dmoj\GI20951-PA 127 GI20951-PA 4..121 2..119 359 57.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:55:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20785-PA 963 GL20785-PA 1..179 1..176 746 85.5 Plus
Dper\GL20785-PA 963 GL20785-PA 258..418 231..384 730 88.2 Plus
Dper\GL23993-PA 415 GL23993-PA 3..122 1..120 430 61.7 Plus
Dper\GL17189-PA 680 GL17189-PA 5..120 4..119 409 62.1 Plus
Dper\GL23182-PA 258 GL23182-PA 3..131 4..135 363 52.6 Plus
Dper\GL10513-PA 126 GL10513-PA 3..120 2..119 359 57.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:56:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11032-PA 779 GA11032-PA 509..779 473..743 1095 83.8 Plus
Dpse\GA28270-PA 592 GA28270-PA 195..308 4..117 431 61.4 Plus
Dpse\ttk-PB 640 GA14992-PB 3..122 1..120 425 61.7 Plus
Dpse\ttk-PA 827 GA14992-PA 3..122 1..120 424 61.7 Plus
Dpse\GA30442-PS 461 GA30442-PS 5..120 4..119 414 62.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:56:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14532-PA 743 GM14532-PA 1..743 1..743 3877 99.3 Plus
Dsec\GM14240-PA 541 GM14240-PA 100..213 4..117 430 59.6 Plus
Dsec\GM14235-PA 575 GM14235-PA 196..309 4..117 428 61.4 Plus
Dsec\GM16442-PA 643 GM16442-PA 3..122 1..120 424 60.8 Plus
Dsec\GM20503-PA 612 GM20503-PA 5..120 4..119 408 62.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:56:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13728-PA 359 GD13728-PA 1..359 385..743 1873 99.4 Plus
Dsim\GD13495-PA 1066 GD13495-PA 196..309 4..117 428 61.4 Plus
Dsim\ttk-PA 813 GD21596-PA 3..122 1..120 426 60.8 Plus
Dsim\lola-PA 671 GD25965-PA 63..178 4..119 405 62.1 Plus
Dsim\GD25412-PA 127 GD25412-PA 4..121 2..119 359 57.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:56:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13138-PA 798 GJ13138-PA 1..176 1..172 776 86.9 Plus
Dvir\GJ12695-PA 635 GJ12695-PA 191..304 4..117 435 63.2 Plus
Dvir\GJ12698-PA 524 GJ12698-PA 108..221 4..117 425 58.8 Plus
Dvir\GJ23100-PA 654 GJ23100-PA 1..120 1..120 425 61.7 Plus
Dvir\GJ20132-PA 998 GJ20132-PA 5..117 4..116 403 62.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:56:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17760-PA 1395 GK17760-PA 1..172 1..172 758 92.4 Plus
Dwil\GK16859-PA 530 GK16859-PA 54..167 4..117 428 63.2 Plus
Dwil\GK16863-PA 1092 GK16863-PA 111..224 4..117 426 60.5 Plus
Dwil\GK12114-PA 799 GK12114-PA 3..122 1..120 422 61.7 Plus
Dwil\GK10673-PA 1051 GK10673-PA 5..120 4..119 406 62.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:56:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20360-PA 741 GE20360-PA 1..741 1..743 3835 98.5 Plus
Dyak\bab1-PA 542 GE20985-PA 100..213 4..117 430 59.6 Plus
Dyak\GE20983-PA 1072 GE20983-PA 203..316 4..117 429 61.4 Plus
Dyak\ttk-PA 813 GE10957-PA 3..122 1..120 428 61.7 Plus
Dyak\GE13086-PA 610 GE13086-PA 5..120 4..119 409 62.1 Plus

LD38452.hyp Sequence

Translation from 368 to 2599

> LD38452.hyp
MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLS
ACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLP
HILKTAEMLKIKGLAEMPTDPANLTKSDSKSSTDGTEMVGGAGVGTGAGN
SAGSLGAGSGSSVGDSLWSSSEAQQFQQQQQQQAQQQAQQQHHHHQQQQQ
LQQQQQQAQQQQQQQQHHHHHHQQQQSGQAQAAQTHHHQMRRTPSPLSAG
TSPATRRKRLRKSSNNGSGDRNNAEEQHNSSLDAGSGAGNAGLSLAQMNQ
MTFGAGGGLAGHSLHAAKLLKESASAELEQQPQDSDLDDGHGHLHMQIKP
EVDIGGVNQTMPLDISGGTTPSEHDAPNSQSSHSGLQWTVVDSNYPRFSL
PACQSNLLGNGGGSGGGAGSQSSGANSAGGVNSDQRQQHEAQQQATQQQQ
HLQQLHYQQQQQQEQASASGQAYSSQIITVNNLVGSYATAAQNLSPTSPN
ESNMVQSVYSQGPTPTQSPVHAGVGGASAAGGAAGNASAGNGGAPGAANQ
VVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKK
RGYPVSRPSIKARVVKQEPNLSPSPTPSTNQGDDNTNETLGMQIPPQAET
PTPSLMCTSHHTGLGSGAGSLPAGGNSHPAIGVMSLFDPRYMDSPGNVHS
MTRQRYIEATGGGAGAGTGAGTGTINVNPTTAMNLQSINFNSI*

LD38452.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:42:39
Subject Length Description Subject Range Query Range Score Percent Strand
BtbVII-PG 816 CG43365-PG 1..743 1..743 3884 100 Plus
BtbVII-PE 743 CG43365-PE 1..743 1..743 3884 100 Plus
BtbVII-PD 743 CG43365-PD 1..743 1..743 3884 100 Plus
BtbVII-PB 743 CG11494-PB 1..743 1..743 3884 100 Plus
BtbVII-PA 743 CG11494-PA 1..743 1..743 3884 100 Plus