Clone LD38495 Report

Search the DGRC for LD38495

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:384
Well:95
Vector:pOT2
Associated Gene/TranscriptCG4221-RA
Protein status:LD38495.pep: gold
Preliminary Size:3322
Sequenced Size:3183

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4221 2001-09-19 Blastp of sequenced clone
CG4221 2003-01-01 Sim4 clustering to Release 3
CG4221 2008-04-29 Release 5.5 accounting
CG4221 2008-08-15 Release 5.9 accounting
CG4221 2008-12-18 5.12 accounting

Clone Sequence Records

LD38495.complete Sequence

3183 bp (3183 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058675

> LD38495.complete
CTGTCGACGCATCCAGGTGCCCGCGTGTCCCGGTGTCGTAGAAGCGGATC
AAACGGTCTCAAGGCGCCGCTCTGCGTTGCGTGCCTACGTGTCCTACGGG
TGTGTGTGTGTGTGTGTGTGCGAGAGTCTGCGCTGGTGTTGGTGCCGTGA
GTCAGTGAGCGCAAAAAAGATAACACAAAGAGCCATAGTGAAAGATCGAA
ACGCACACACTCTCACGCGACCTGCAATGAAAATAAAGTAGAGAAAAGAG
TGCGCTAGTGTATGTGTGTGCGAGTGGAATAACAGAGAAAATAAATGGAA
ATTAAATGAAGCTGCAAAAACTGCCAAATAAACAAAGTGCTATGCGATGC
ATAAATGAGAACCCAAACGGAGTTACCTGTATAATCATCAAGACCTTCGC
GCCACTCTAGAGGCTTCTAGCTGATAGACAAAGGATCCAAACCGGAGAGG
AACCAACCATGTCGCACAAGACTAGCAACCGTCGCAGCAGCGACCTGGAG
TGTCCACTTGCTTCATTGGGCCGCAACAGCAATGCGGTACGCGACCACTA
CCACCACCCGCATCCGCTGAGCTCCAGTCCACTGGATCCACAGGCCTACA
AAATGATGTCCCGCAAGTCACCCAATCCCGGCCTGGAGGTGGCCGAAGCG
CTGGCCTCGCGCAGCTCCACGCCGCCCAGCGACCAGGCTGGGGCATCCTC
GACGGCGGCGGCGGCAGCAGTGCTCCATATGGTGCAGCAAAAAGCGGCGA
CCTTTGAGTTGAGAGGCCGCCACTCGCGACCAACCGAGCAGCAGACCAGC
TATGGAGCCCATTCCACGGCTTCGGTGGGTAGGCATGCGAAGAAGTCCCC
AGAACTACCAGCTCCAGCGTCGAGGAACGTGGCTCCCGTACCACAGCCGC
GGAACTTCCTAACACTAGAACATGTCCTGCAATTTGGAACCCAGCGACCC
AGTTGGATGCACGGCAACAGTGCGGACACGGAGGATTCGAGTGACAACAA
CGCGGGTGGCGGTGGAGCTGGAAGTGGCAGTGGTGGAGCTGGAGGACGGA
GACGTGCCCAAGGTGGCCGCTGCAGTGTGCCCACTGTACTCAGCAGCAAT
GGCAGCGGCGGCAATGGAGCCCAGTACCTGCTGGACAAGAAAATGGAGTC
ACTGTATCTGGGTAACGCCCTGAGAACCCTTCCCTTAGGCGCCGAAGCGA
GTCAGTTCCAAAACGAACGCTACTACCTGGAGGATTACAGCAGCGGCAGC
GGGAACGAGCGACTGCCAGAACGCCTGCATCATCCGCGCACCTCCAGTCC
CAGCGAAACAAGTGGATCGGATCGCTACCTCCTAAACCGCAGCTCCAACT
CCAACCACCTGCACTCCAAGGGCCAGAGCCTCTCGGACGGGCTGTGCAAC
CTGGGACGCTTCTCGCCCAGCTTGGATCAAGGCTACGCCACACTGGTCTC
ACCCTCTCCCACGGGTCACCATTCAAGTGGCGGAGCGGGCAATGTGACCA
ATTCTACCACAGCCAGTGGAGCGGGAATCATGGCAAGCAGTACGCCAACT
ACAACGCCGCGAAGAGGAGCCTCTAGCAATGGATTGGGAGGAGGAGCAGC
GTCCGCCATTGGACCGCCGCCCTGGAACCGCAAAGGTCCCTTCCGCTGCG
GTCCGCTCTTTGATCGTCTGCCCGACGAGGCCGTTGTACGGATCTTCTCA
TGGCTGGACAGCTGCGAGTTGTGCAACGTGGCGCGAGTCTGCCGGAGATT
CGAGCACCTCGCCTGGCGGCCCATCCTGTGGAAGGTGATCTCGCTGCGGG
GCGAGCACTTGAATGGCGACAAGACGCTGAAGATGATCTTCCGCCAGCTT
TGCGGCCAGAGCTGCAATGGCGCTTGTCCGGAAGTGGAGCGCGTCATGCT
CGCCGATGGCTGCCGCATCTCGGACAAGGGCCTTCAGCTCCTCACGCGCC
GCTGCCCCGAGTTGACCCACCTTCAGCTACAGACCTGCGTGGATATCACC
AATCAGGCGCTGGTCGAGGCGCTGACCAAGTGCAGCAACCTGCAGCATCT
GGATGTGACGGGCTGCAGCCAGGTGAGCAGCATCAGTCCTAATCCCCACA
TGGAGCCACCGCGTCGCCTGCTGCTTCAATATCTGGACCTCACGGACTGC
ATGGCCATCGATGACATGGGTCTGAAGATCGTGGTCAAGAACTGCCCCCA
GCTGGTTTACCTTTATCTGCGCCGCTGCATACAAGTCACAGATGCGGGTC
TGAAGTTTGTGCCCAGTTTTTGCGTCTCGCTGAAGGAGCTCAGTGTGTCC
GACTGCCTGAACATCACAGATTTCGGATTGTATGAGTTGGCCAAGCTGGG
AGCCGCACTGCGCTACCTTTCCGTGGCCAAATGCGAGCGGGTCTCGGATG
CGGGGCTAAAGGTGATTGCCAGGCGGTGCTATAAGCTGCGCTATCTGAAC
GCTCGAGGATGTGAGGCCGTGAGCGATGACTCCATTACGGTCCTGGCGAG
ATCCTGTCCACGTCTGCGAGCCTTGGACATCGGGAAGTGCGATGTGAGCG
ACGCGGGGCTTCGAGCTCTGGCCGAGAGCTGTCCGAACCTGAAGAAGCTC
AGCCTGCGCAGCTGCGACATGATCACGGACCGCGGGGTGCAGTGTATCGC
ATATTATTGTCGCGGTCTCCAGCAACTGAATATCCAGGACTGTCCGGTTT
CCATCGAGGGCTACCGGGCGGTCAAGAAGTACTGCAAGCGCTGCATCATC
GAACACACAAATCCGGGATTCTGTTGAGATGTTCCATAGCCGGCGGTAGA
CACCACAAAGCACAGAGGCAGGCCATATGAGCACAGATATAAAGGGAATT
TATGGGCAAAGAAAACTCTTGAAAAACAAAATAGTTGATGAAGTGGCAGG
CAAATTTTAGCCATACACGGACTTTTGGGTCCTCAAGTCCCCAAGTCTTA
GTTCAATGATTAACCGATATAATCTATTGGTTTGGATATAATTTAAATTG
TTCTCTGTAATCAGCCACCACTTTGCCCGAGCTAAATGAGATTATTGTAA
ATTGTATATATCAAACTGACGCAGGACAGAACTAGCGTAGCATAGAGCAT
GTTCAGTAGACTATGTCTAAGTAGACTAATTCTTGGAGTAATAAATTATT
TTCCCCACCAGAAAAAAAAAAAAAAAAAAAAAA

LD38495.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:17:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG4221-RA 3250 CG4221-RA 59..3222 1..3164 15820 100 Plus
CG5478-RA 1035 CG5478-RA 845..1035 3164..2974 955 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 11756558..11757479 2240..3161 4595 99.9 Plus
chr3R 27901430 chr3R 11754500..11755378 391..1269 4380 99.9 Plus
chr3R 27901430 chr3R 11755432..11756228 1266..2062 3925 99.5 Plus
chr3R 27901430 chr3R 11745488..11745879 1..392 1945 99.7 Plus
chr3R 27901430 chr3R 11756307..11756487 2061..2241 905 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:33:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:06:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15931966..15932890 2240..3164 4625 100 Plus
3R 32079331 3R 15929908..15930786 391..1269 4395 100 Plus
3R 32079331 3R 15930840..15931636 1266..2062 3985 100 Plus
3R 32079331 3R 15920913..15921304 1..392 1960 100 Plus
3R 32079331 3R 15931715..15931895 2061..2241 905 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:40:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 15672797..15673721 2240..3164 4625 100 Plus
3R 31820162 3R 15670739..15671617 391..1269 4395 100 Plus
3R 31820162 3R 15671671..15672467 1266..2062 3985 100 Plus
3R 31820162 3R 15661744..15662135 1..392 1960 100 Plus
3R 31820162 3R 15672546..15672726 2061..2241 905 100 Plus
Blast to na_te.dros performed on 2019-03-15 16:06:04 has no hits.

LD38495.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:06:52 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 11745488..11745879 1..392 94 -> Plus
chr3R 11754502..11755378 393..1269 99 -> Plus
chr3R 11755436..11756227 1270..2061 99 -> Plus
chr3R 11756308..11756487 2062..2241 100 -> Plus
chr3R 11756560..11757479 2242..3161 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:21:43 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
CG4221-RA 1..2319 459..2777 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:59:58 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
CG4221-RA 1..2319 459..2777 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:53:06 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
CG4221-RA 1..2319 459..2777 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:30:22 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
CG4221-RA 1..2319 459..2777 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:27:16 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
CG4221-RA 1..2319 459..2777 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:21:42 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
CG4221-RA 1..3161 1..3161 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:59:58 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
CG4221-RA 1..3161 1..3161 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:53:06 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
CG4221-RA 16..3176 1..3161 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:30:22 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
CG4221-RA 1..3161 1..3161 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:27:16 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
CG4221-RA 16..3176 1..3161 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:06:52 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15920913..15921304 1..392 100 -> Plus
3R 15929910..15930786 393..1269 100 -> Plus
3R 15930844..15931635 1270..2061 100 -> Plus
3R 15931716..15931895 2062..2241 100 -> Plus
3R 15931968..15932887 2242..3161 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:06:52 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15920913..15921304 1..392 100 -> Plus
3R 15929910..15930786 393..1269 100 -> Plus
3R 15930844..15931635 1270..2061 100 -> Plus
3R 15931716..15931895 2062..2241 100 -> Plus
3R 15931968..15932887 2242..3161 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:06:52 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15920913..15921304 1..392 100 -> Plus
3R 15929910..15930786 393..1269 100 -> Plus
3R 15930844..15931635 1270..2061 100 -> Plus
3R 15931716..15931895 2062..2241 100 -> Plus
3R 15931968..15932887 2242..3161 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:53:06 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11746635..11747026 1..392 100 -> Plus
arm_3R 11755632..11756508 393..1269 100 -> Plus
arm_3R 11756566..11757357 1270..2061 100 -> Plus
arm_3R 11757438..11757617 2062..2241 100 -> Plus
arm_3R 11757690..11758609 2242..3161 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:06:46 Download gff for LD38495.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15661744..15662135 1..392 100 -> Plus
3R 15670741..15671617 393..1269 100 -> Plus
3R 15671675..15672466 1270..2061 100 -> Plus
3R 15672547..15672726 2062..2241 100 -> Plus
3R 15672799..15673718 2242..3161 100   Plus

LD38495.pep Sequence

Translation from 458 to 2776

> LD38495.pep
MSHKTSNRRSSDLECPLASLGRNSNAVRDHYHHPHPLSSSPLDPQAYKMM
SRKSPNPGLEVAEALASRSSTPPSDQAGASSTAAAAAVLHMVQQKAATFE
LRGRHSRPTEQQTSYGAHSTASVGRHAKKSPELPAPASRNVAPVPQPRNF
LTLEHVLQFGTQRPSWMHGNSADTEDSSDNNAGGGGAGSGSGGAGGRRRA
QGGRCSVPTVLSSNGSGGNGAQYLLDKKMESLYLGNALRTLPLGAEASQF
QNERYYLEDYSSGSGNERLPERLHHPRTSSPSETSGSDRYLLNRSSNSNH
LHSKGQSLSDGLCNLGRFSPSLDQGYATLVSPSPTGHHSSGGAGNVTNST
TASGAGIMASSTPTTTPRRGASSNGLGGGAASAIGPPPWNRKGPFRCGPL
FDRLPDEAVVRIFSWLDSCELCNVARVCRRFEHLAWRPILWKVISLRGEH
LNGDKTLKMIFRQLCGQSCNGACPEVERVMLADGCRISDKGLQLLTRRCP
ELTHLQLQTCVDITNQALVEALTKCSNLQHLDVTGCSQVSSISPNPHMEP
PRRLLLQYLDLTDCMAIDDMGLKIVVKNCPQLVYLYLRRCIQVTDAGLKF
VPSFCVSLKELSVSDCLNITDFGLYELAKLGAALRYLSVAKCERVSDAGL
KVIARRCYKLRYLNARGCEAVSDDSITVLARSCPRLRALDIGKCDVSDAG
LRALAESCPNLKKLSLRSCDMITDRGVQCIAYYCRGLQQLNIQDCPVSIE
GYRAVKKYCKRCIIEHTNPGFC*

LD38495.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:37:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18550-PA 771 GF18550-PA 1..771 1..772 3588 89.8 Plus
Dana\GF11789-PA 637 GF11789-PA 225..592 400..747 389 28.3 Plus
Dana\GF13252-PA 492 GF13252-PA 152..488 398..770 255 25.6 Plus
Dana\GF24527-PA 666 GF24527-PA 389..664 510..764 226 26.6 Plus
Dana\GF12565-PA 689 GF12565-PA 307..621 487..745 187 26.1 Plus
Dana\GF24527-PA 666 GF24527-PA 483..661 502..685 163 29.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:37:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16963-PA 778 GG16963-PA 1..778 1..772 3997 97.2 Plus
Dere\GG22638-PA 641 GG22638-PA 229..549 400..753 312 25.3 Plus
Dere\GG20101-PA 538 GG20101-PA 136..526 381..760 298 24.9 Plus
Dere\GG13900-PA 671 GG13900-PA 290..669 404..764 231 24.9 Plus
Dere\GG21523-PA 638 GG21523-PA 324..588 492..745 178 27.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:37:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23468-PA 766 GH23468-PA 1..766 1..772 3263 81.3 Plus
Dgri\GH23299-PA 746 GH23299-PA 1..746 1..772 2976 73.9 Plus
Dgri\GH20493-PA 677 GH20493-PA 265..644 400..758 381 27.9 Plus
Dgri\GH22100-PA 550 GH22100-PA 153..538 386..760 289 24.7 Plus
Dgri\GH16626-PA 672 GH16626-PA 395..670 510..764 223 26.6 Plus
Dgri\GH16626-PA 672 GH16626-PA 489..625 502..642 162 31.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
Fbxl7-PA 772 CG4221-PA 1..772 1..772 4080 100 Plus
CG9003-PB 651 CG9003-PB 14..604 169..745 443 26.9 Plus
CG9003-PC 426 CG9003-PC 14..379 400..745 402 28.7 Plus
CG9003-PG 437 CG9003-PG 25..390 400..745 402 28.7 Plus
CG9003-PD 437 CG9003-PD 25..390 400..745 402 28.7 Plus
CG9003-PE 455 CG9003-PE 25..390 400..745 402 28.7 Plus
CG9003-PA 464 CG9003-PA 52..417 400..745 402 28.7 Plus
CG9003-PF 497 CG9003-PF 25..390 400..745 402 28.7 Plus
Ppa-PC 538 CG9952-PC 136..526 381..760 314 24.9 Plus
Ppa-PA 538 CG9952-PA 136..526 381..760 314 24.9 Plus
Ppa-PB 562 CG9952-PB 136..526 381..760 314 24.9 Plus
CG32085-PA 666 CG32085-PA 34..664 177..764 246 22.7 Plus
CG8272-PA 689 CG8272-PA 307..621 487..745 207 24.8 Plus
CG8272-PB 710 CG8272-PB 307..621 487..745 207 24.8 Plus
CG12402-PA 632 CG12402-PA 361..582 505..745 200 27.5 Plus
CG12402-PB 639 CG12402-PB 361..582 505..745 200 27.5 Plus
CG12402-PC 671 CG12402-PC 361..582 505..745 200 27.5 Plus
Kdm2-PE 1345 CG11033-PE 729..1289 31..629 168 21.4 Plus
Kdm2-PD 1345 CG11033-PD 729..1289 31..629 168 21.4 Plus
Kdm2-PC 1345 CG11033-PC 729..1289 31..629 168 21.4 Plus
Kdm2-PB 1345 CG11033-PB 729..1289 31..629 168 21.4 Plus
jet-PB 313 CG8873-PB 98..281 569..750 167 25.3 Plus
CG12402-PA 632 CG12402-PA 384..582 502..694 166 27.9 Plus
CG12402-PB 639 CG12402-PB 384..582 502..694 166 27.9 Plus
CG12402-PC 671 CG12402-PC 384..582 502..694 166 27.9 Plus
jet-PB 313 CG8873-PB 111..282 556..725 166 26.2 Plus
jet-PA 319 CG8873-PA 98..277 569..746 162 24.7 Plus
jet-PA 319 CG8873-PA 41..290 400..656 160 26.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:37:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22952-PA 782 GI22952-PA 1..782 1..772 3337 81.9 Plus
Dmoj\GI21037-PA 677 GI21037-PA 265..644 400..758 385 28.2 Plus
Dmoj\GI21037-PA 677 GI21037-PA 333..540 555..760 296 30.8 Plus
Dmoj\GI19235-PA 545 GI19235-PA 148..533 386..760 295 24.9 Plus
Dmoj\GI24556-PA 615 GI24556-PA 313..579 501..758 169 27.2 Plus
Dmoj\GI23602-PA 372 GI23602-PA 96..274 569..745 163 25.7 Plus
Dmoj\GI23602-PA 372 GI23602-PA 106..341 525..725 158 24.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:37:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22080-PA 789 GL22080-PA 1..789 1..772 3454 86.8 Plus
Dper\GL10673-PA 633 GL10673-PA 221..600 400..758 378 27.2 Plus
Dper\GL10712-PA 529 GL10712-PA 127..517 381..760 295 24.9 Plus
Dper\GL16345-PA 380 GL16345-PA 120..334 527..746 198 29 Plus
Dper\GL17357-PA 665 GL17357-PA 307..597 487..745 180 26.9 Plus
Dper\GL16345-PA 380 GL16345-PA 197..333 502..642 160 32.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:37:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18044-PA 787 GA18044-PA 1..787 1..772 3455 87.1 Plus
Dpse\GA21468-PA 632 GA21468-PA 220..599 400..758 373 27.2 Plus
Dpse\GA22149-PA 529 GA22149-PA 127..517 381..760 294 24.9 Plus
Dpse\GA23867-PA 692 GA23867-PA 420..690 510..764 184 27.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:37:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24270-PA 772 GM24270-PA 1..772 1..772 4011 98.1 Plus
Dsec\GM20416-PA 653 GM20416-PA 241..620 400..758 360 28.2 Plus
Dsec\GM15616-PA 538 GM15616-PA 136..526 381..760 299 24.9 Plus
Dsec\GM24725-PA 664 GM24725-PA 387..662 510..764 225 26.6 Plus
Dsec\GM25887-PA 632 GM25887-PA 318..582 492..745 181 27.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:37:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19058-PA 772 GD19058-PA 1..772 1..772 4044 98.8 Plus
Dsim\GD25892-PA 615 GD25892-PA 203..582 400..758 352 27.9 Plus
Dsim\GD25110-PA 522 GD25110-PA 136..510 381..760 287 24.8 Plus
Dsim\GD20458-PA 632 GD20458-PA 318..582 492..745 180 27.6 Plus
Dsim\GD19685-PA 557 GD19685-PA 237..528 401..686 165 26.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:37:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23768-PA 780 GJ23768-PA 1..780 1..772 3285 82.1 Plus
Dvir\GJ21964-PA 660 GJ21964-PA 248..627 400..758 388 28.2 Plus
Dvir\GJ21964-PA 660 GJ21964-PA 316..523 555..760 298 30.8 Plus
Dvir\GJ20310-PA 542 GJ20310-PA 145..530 386..760 294 24.9 Plus
Dvir\GJ11262-PA 682 GJ11262-PA 301..680 404..764 232 24.9 Plus
Dvir\GJ20797-PA 373 GJ20797-PA 97..275 569..745 172 26.3 Plus
Dvir\GJ20797-PA 373 GJ20797-PA 107..342 525..725 154 25.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:37:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11217-PA 764 GK11217-PA 1..764 1..772 3039 77.7 Plus
Dwil\GK21630-PA 634 GK21630-PA 222..601 400..758 398 28.4 Plus
Dwil\GK21848-PA 543 GK21848-PA 258..537 466..742 319 30.6 Plus
Dwil\GK21848-PA 543 GK21848-PA 141..531 381..760 299 24.9 Plus
Dwil\GK12413-PA 675 GK12413-PA 294..673 404..764 226 24.9 Plus
Dwil\GK20942-PA 680 GK20942-PA 288..612 474..745 207 26.5 Plus
Dwil\GK21848-PA 543 GK21848-PA 294..538 476..692 201 26.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:37:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24351-PA 780 GE24351-PA 1..780 1..772 4004 97.4 Plus
Dyak\GE13509-PA 640 GE13509-PA 228..607 400..758 361 28.2 Plus
Dyak\GE11843-PA 533 GE11843-PA 131..521 381..760 297 24.9 Plus
Dyak\GE20190-PA 666 GE20190-PA 285..664 404..764 232 24.9 Plus
Dyak\GE10063-PA 638 GE10063-PA 324..588 492..745 177 27.2 Plus

LD38495.hyp Sequence

Translation from 458 to 2776

> LD38495.hyp
MSHKTSNRRSSDLECPLASLGRNSNAVRDHYHHPHPLSSSPLDPQAYKMM
SRKSPNPGLEVAEALASRSSTPPSDQAGASSTAAAAAVLHMVQQKAATFE
LRGRHSRPTEQQTSYGAHSTASVGRHAKKSPELPAPASRNVAPVPQPRNF
LTLEHVLQFGTQRPSWMHGNSADTEDSSDNNAGGGGAGSGSGGAGGRRRA
QGGRCSVPTVLSSNGSGGNGAQYLLDKKMESLYLGNALRTLPLGAEASQF
QNERYYLEDYSSGSGNERLPERLHHPRTSSPSETSGSDRYLLNRSSNSNH
LHSKGQSLSDGLCNLGRFSPSLDQGYATLVSPSPTGHHSSGGAGNVTNST
TASGAGIMASSTPTTTPRRGASSNGLGGGAASAIGPPPWNRKGPFRCGPL
FDRLPDEAVVRIFSWLDSCELCNVARVCRRFEHLAWRPILWKVISLRGEH
LNGDKTLKMIFRQLCGQSCNGACPEVERVMLADGCRISDKGLQLLTRRCP
ELTHLQLQTCVDITNQALVEALTKCSNLQHLDVTGCSQVSSISPNPHMEP
PRRLLLQYLDLTDCMAIDDMGLKIVVKNCPQLVYLYLRRCIQVTDAGLKF
VPSFCVSLKELSVSDCLNITDFGLYELAKLGAALRYLSVAKCERVSDAGL
KVIARRCYKLRYLNARGCEAVSDDSITVLARSCPRLRALDIGKCDVSDAG
LRALAESCPNLKKLSLRSCDMITDRGVQCIAYYCRGLQQLNIQDCPVSIE
GYRAVKKYCKRCIIEHTNPGFC*

LD38495.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:30:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG4221-PA 772 CG4221-PA 1..772 1..772 4080 100 Plus
CG9003-PB 651 CG9003-PB 14..604 169..745 443 26.9 Plus
CG9003-PC 426 CG9003-PC 14..379 400..745 402 28.7 Plus
CG9003-PG 437 CG9003-PG 25..390 400..745 402 28.7 Plus
CG9003-PD 437 CG9003-PD 25..390 400..745 402 28.7 Plus