BDGP Sequence Production Resources |
Search the DGRC for LD38503
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 385 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4942-RA |
Protein status: | LD38503.pep: gold |
Preliminary Size: | 1436 |
Sequenced Size: | 1351 |
Gene | Date | Evidence |
---|---|---|
CG4942 | 2001-01-01 | Release 2 assignment |
CG4942 | 2001-11-09 | Blastp of sequenced clone |
CG4942 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4942 | 2008-04-29 | Release 5.5 accounting |
CG4942 | 2008-08-15 | Release 5.9 accounting |
CG4942 | 2008-12-18 | 5.12 accounting |
1351 bp (1351 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069618
> LD38503.complete CTGTTCACAATGATAACAACTCGCACTGCTGATTCTATATAGTTGTTTAC GTTGATTATTAGTTTTATATTAATTAAAAATGTCAGCTTTGCTTCTTTTA CGCACCTGTAGAAGTTCATCAATTGCTGGCATCTACAAATACACATACCA AGGAACAACTATTGCGAATCACACATGCAATCATCGTCTGTCGTCTACAG AAGCGGCGGCCGCGAGTGTCCAACTGGCAAATGCCGGTGGATTGGTGGGA TATTGGCAGACCTTGTCCAACAGCACGCCGGTGGCCTATATGCAGGATGT TCTCATTAAGATCCACGACTACAGTGGCCTGCCCTGGTGGGCGTCCATCG TGCTGTCCACTTTCCTTTTTCGGAGCGTGGTCACCCTGCCTCTGACCATT TACCAGCACAAAATCACCGCCAGAATTGAAAAGATAGCGCTGGAGATGCC GGCCATTGTGGAGGAACTGAAAAAAGAGGCAGCCATGGCCAAGCACAAGT TCAAGTGGAGCGAAAAGCAGACTCAGATTGTTTATCGGCGTTCGATCAAG AAGCAGTGGCAGAACCTTATAGTTCGGGATAACTGCCATCCCATGAAGAC CATGATTGTGCTATGGGGTCAGATTCCCCTGTGGATCTTTCAATCCGTGG CTCTGCGCAATTTAGTGTACATGCTGCCGGATCCCACGTCCATTCAAGCT CAAATCGTGACCACCGAAATGACCATTGGCGGATTTGGTTGGATACCAAA CCTTACGGTGGTGGATAACTCTTATATCCTGCCTGTAGCATTAGGTCTTA TCAATTTGGCCATCATTGAAGTGCAAGCCATGTCTAGAACTCGTCCTTCT ACACGCTTGCAGAACATCGCCAACAATGTGTTCCGTGGATTGAGTGTTGT GATGGTTCCAGTAGCCTGTACAGTGCCTTCAGCTTTATGTGTATACTGGG TAGCTTCCAGCAGTTTTGGCCTTGCTCAAAATCTGCTCATCCTCTCGCCG GAAGTGCGACGATCTGTGGGAATTCCCAAAACACAAACGGAACTCAGTGA GCCGTACGATCTGCTCTGGCTAAAAATACAGCAGAGGCTAAGACTTGCCG AGAGGGCGCCGGCTGATAAGCCGGCAGCCAAATGATCTAGTCTCTTAGTC ATAATCACCTAGTCTAATTTGGGTATGACGTTTAGTTTGTTTAAATGCGA CTGCGCCACTGTAATTCATCATCATCATTCTTAAGCTCCAACATCTCAGA TTCATAGAAGTAAATAAATGAGTGAAAAACCCCAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA A
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9065050..9065593 | 1..544 | 99 | -> | Plus |
chr3L | 9065651..9066389 | 545..1283 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4942-RA | 1..1056 | 80..1135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4942-RA | 1..1056 | 80..1135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4942-RA | 1..1056 | 80..1135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4942-RA | 1..1056 | 80..1135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4942-RA | 1..1056 | 80..1135 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4942-RA | 1..1283 | 1..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4942-RA | 1..1283 | 1..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4942-RA | 24..1306 | 1..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4942-RA | 1..1283 | 1..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4942-RA | 24..1306 | 1..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9073128..9073671 | 1..544 | 100 | -> | Plus |
3L | 9073729..9074467 | 545..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9073128..9073671 | 1..544 | 100 | -> | Plus |
3L | 9073729..9074467 | 545..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9073128..9073671 | 1..544 | 100 | -> | Plus |
3L | 9073729..9074467 | 545..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9066228..9066771 | 1..544 | 100 | -> | Plus |
arm_3L | 9066829..9067567 | 545..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9066228..9066771 | 1..544 | 100 | -> | Plus |
3L | 9066829..9067567 | 545..1283 | 100 | Plus |
Translation from 79 to 1134
> LD38503.pep MSALLLLRTCRSSSIAGIYKYTYQGTTIANHTCNHRLSSTEAAAASVQLA NAGGLVGYWQTLSNSTPVAYMQDVLIKIHDYSGLPWWASIVLSTFLFRSV VTLPLTIYQHKITARIEKIALEMPAIVEELKKEAAMAKHKFKWSEKQTQI VYRRSIKKQWQNLIVRDNCHPMKTMIVLWGQIPLWIFQSVALRNLVYMLP DPTSIQAQIVTTEMTIGGFGWIPNLTVVDNSYILPVALGLINLAIIEVQA MSRTRPSTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQ NLLILSPEVRRSVGIPKTQTELSEPYDLLWLKIQQRLRLAERAPADKPAA K*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10853-PA | 352 | GF10853-PA | 1..352 | 1..351 | 1505 | 81 | Plus |
Dana\GF23816-PA | 448 | GF23816-PA | 110..370 | 38..321 | 208 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14371-PA | 351 | GG14371-PA | 1..351 | 1..351 | 1738 | 94.3 | Plus |
Dere\GG13956-PA | 441 | GG13956-PA | 117..363 | 43..321 | 199 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15574-PA | 352 | GH15574-PA | 3..352 | 5..351 | 1405 | 77.7 | Plus |
Dgri\GH23226-PA | 449 | GH23226-PA | 81..365 | 7..317 | 213 | 27.7 | Plus |
Dgri\GH17044-PA | 457 | GH17044-PA | 81..365 | 7..317 | 212 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4942-PA | 351 | CG4942-PA | 1..351 | 1..351 | 1798 | 100 | Plus |
CG6404-PA | 441 | CG6404-PA | 128..362 | 62..320 | 205 | 26.5 | Plus |
CG6404-PB | 441 | CG6404-PB | 128..362 | 62..320 | 205 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16849-PA | 322 | GI16849-PA | 4..322 | 36..351 | 1412 | 83.1 | Plus |
Dmoj\GI12049-PA | 423 | GI12049-PA | 101..328 | 66..317 | 196 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15036-PA | 350 | GL15036-PA | 1..350 | 1..351 | 1528 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18542-PA | 350 | GA18542-PA | 1..350 | 1..351 | 1531 | 80.6 | Plus |
Dpse\GA19566-PA | 438 | GA19566-PA | 115..361 | 43..321 | 211 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25116-PA | 351 | GM25116-PA | 1..351 | 1..351 | 1781 | 95.4 | Plus |
Dsec\GM24796-PA | 441 | GM24796-PA | 117..399 | 43..341 | 196 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14151-PA | 1009 | GD14151-PA | 1..219 | 1..219 | 1142 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12599-PA | 349 | GJ12599-PA | 3..349 | 5..351 | 1443 | 79.3 | Plus |
Dvir\GJ13319-PA | 447 | GJ13319-PA | 138..369 | 66..321 | 193 | 27.1 | Plus |
Translation from 79 to 1134
> LD38503.hyp MSALLLLRTCRSSSIAGIYKYTYQGTTIANHTCNHRLSSTEAAAASVQLA NAGGLVGYWQTLSNSTPVAYMQDVLIKIHDYSGLPWWASIVLSTFLFRSV VTLPLTIYQHKITARIEKIALEMPAIVEELKKEAAMAKHKFKWSEKQTQI VYRRSIKKQWQNLIVRDNCHPMKTMIVLWGQIPLWIFQSVALRNLVYMLP DPTSIQAQIVTTEMTIGGFGWIPNLTVVDNSYILPVALGLINLAIIEVQA MSRTRPSTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQ NLLILSPEVRRSVGIPKTQTELSEPYDLLWLKIQQRLRLAERAPADKPAA K*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4942-PA | 351 | CG4942-PA | 1..351 | 1..351 | 1798 | 100 | Plus |
CG6404-PA | 441 | CG6404-PA | 128..362 | 62..320 | 205 | 26.5 | Plus |
CG6404-PB | 441 | CG6404-PB | 128..362 | 62..320 | 205 | 26.5 | Plus |