Clone LD38576 Report

Search the DGRC for LD38576

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:385
Well:76
Vector:pOT2
Associated Gene/TranscriptCG5002-RA
Protein status:LD38576.pep: gold
Preliminary Size:2207
Sequenced Size:1995

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5002 2001-01-01 Release 2 assignment
CG5002 2001-07-04 Blastp of sequenced clone
CG5002 2003-01-01 Sim4 clustering to Release 3
CG5002 2008-04-29 Release 5.5 accounting
CG5002 2008-08-15 Release 5.9 accounting
CG5002 2008-12-18 5.12 accounting

Clone Sequence Records

LD38576.complete Sequence

1995 bp (1995 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051897

> LD38576.complete
CACACTGAGCGGACGCGTTAGCTCCCCGGTTTTGATTACAGCCATTGCCT
TTGCATCGCAGCCGGTTTCCCTATCGTTCTCGGAACTACAGCCCGGTTTA
AAGCTGGAGAGCCACCCGCGATGAGAGCCGATGAGGATAATCTGTACCGG
GAGCAACTGCCCAATGTGAGCACGCTTATTAGGGATGGCGGTCGTAAGCT
GTGCCGTCCGTCCACCGTGACCAACAAGTTCCCGATCCTGAAGTGGCTAC
CTCGTTACCGATTGGAGTACATCATGCAGGACTTTATTGCGGGATTCACG
GTGGGATTAACGACTATTCCCCAGGCGATTGCCTATGGAGTGGTGGCCGG
CTTGGAGCCGCAGTATGGTTTATACTCCGCCTTCATGGGTTGCTTCACAT
ACATCGTGTTTGGTTCCTGCAAAGATGTCACAATTGCCACAACCGCCATC
ATGGCTCTAATGGTCAACCAGTATGCCACTATCAGTCCGGATTATGCGGT
TCTGGTGTGTTTCCTAGCTGGTTGCATTGTACTTCTACTTGGATTGCTCA
ACATGGGTGTACTGGTCAGGTTCATTTCGATTCCCGTAATCACTGGCTTC
ACCATGGCGGCGGCCACCACAATTGGCAGTGCCCAGATCAACAACATCGT
GGGTCTGACCAGTCCTTCGAATGATTTACTGCCCGCCTGGAAGAATTTCT
TCACCCACTTGACGTCAATTAGGCTCTGGGATGCCCTGCTGGGTGTCTCA
TCTCTGGTGTTCCTGTTGCTCATGACGCGTGTTAAAGACATCAAATGGGG
CAATCGTATATTCTGGAAGTACCTTGGTCTCTCCCGCAACGCCCTGGCTG
TGATCTTTGGCACCTTTTTGGCCTACATCCTCAGTCGAGATGGGAATCAA
CCCTTCCGTGTCACTGGAAACATTACGGCCGGAGTACCGCCCTTCCGGCT
GCCGCCCTTTAGCACCACCGTAGATGGAGAGTACGTTTCCTTTGGCGAGA
TGATCAGCACTGTCGGCGCATCCTTGGGTTCCATCCCCTTGATTTCGATC
CTGGAAATAGTAGCCATATCGAAGGCATTTTCTAAGGGAAAAATTGTAGA
CGCATCGCAGGAGATGGTGGCACTGGGAATGTGCAACATCATGGGCAGCT
TTGTGCTCTCCATGCCCGTAACGGGATCCTTTACCCGCACGGCTGTGAAT
AATGCCAGTGGGGTGAAGACACCACTGGGTGGAGCTGTCACCGGTGCCCT
GGTGCTCATGGCACTGGCATTCCTTACCCAAACTTTCTACTTTATACCCA
AATGCACGCTGGCTGCAATTATTATAGCGGCGATGATATCGCTAGTGGAG
CTGCACAAGATTAAGGACATGTGGAAATCTAAGAAGAAGGATCTGTTTCC
CTTTGTGGTCACTGTACTCACCTGCATGTTCTGGAGTCTGGAGTACGGAA
TACTGTGTGGCATCGGTGCCAACATGGTATACATTCTATATAGCAGTGCA
CGTCCACATGTAGACATCAAACTGGAGAAGATCAATGGTCACGAAGTTAG
CGTGGTGGATGTGAAGCAAAAGCTGGACTATGCATCGGCTGAGTATCTCA
AGGAGAAGGTGGTGCGCTTCCTGAACAACCAGAATGGCGAGACCCAGTTG
GTGGTTATCAAGGGCGAGGAGATCAACTCCATTGACTATACAGTGGCTAT
GAATATTGTCTCGATGAAGGGCGATTTGGAGGCACTGAACTGCGCCATGA
TCTGCTGGAACTGGAACATCGCCTCCGCCGGAGTCGTCTGCCGACTCAAC
AACGATCTCCGTCCCATCTTCAAGTTCGATTTATCGCTGGAGGAGGTGGT
AGCTGGCCACTTCGATAGTCCCTCCAATACGGCCTCCACCGTAACCATCG
AGGCCTGAAGAACCTAGTTTATTATAAGCTGAAAGTATTGCATCAATATC
ACAATTATATGAAATTTCATTTAAGCAAAAAAAAAAAAAAAAAAA

LD38576.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:26:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG5002-RA 2330 CG5002-RA 113..2095 1..1983 9900 99.9 Plus
CG7912-RA 2145 CG7912-RA 1132..1338 1072..1278 270 75.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:39:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 13638896..13639205 777..1086 1520 99.4 Plus
chr2R 21145070 chr2R 13639260..13639562 1082..1384 1500 99.7 Plus
chr2R 21145070 chr2R 13637897..13638197 136..436 1445 98.7 Plus
chr2R 21145070 chr2R 13640065..13640340 1701..1976 1380 100 Plus
chr2R 21145070 chr2R 13638256..13638483 436..663 1140 100 Plus
chr2R 21145070 chr2R 13639831..13640003 1529..1701 865 100 Plus
chr2R 21145070 chr2R 13639625..13639770 1385..1530 730 100 Plus
chr2R 21145070 chr2R 13637444..13637579 1..136 665 99.3 Plus
chr2R 21145070 chr2R 13638556..13638671 662..777 565 99.1 Plus
chr3R 27901430 chr3R 25829270..25829464 1278..1084 255 75.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:33:20 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:39:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17751770..17752079 777..1086 1535 99.7 Plus
2R 25286936 2R 17752134..17752436 1082..1384 1515 100 Plus
2R 25286936 2R 17750771..17751071 136..436 1505 100 Plus
2R 25286936 2R 17752939..17753221 1701..1983 1400 99.6 Plus
2R 25286936 2R 17751130..17751357 436..663 1140 100 Plus
2R 25286936 2R 17752705..17752877 1529..1701 865 100 Plus
2R 25286936 2R 17752499..17752644 1385..1530 730 100 Plus
2R 25286936 2R 17750315..17750450 1..136 680 100 Plus
2R 25286936 2R 17751430..17751545 662..777 580 100 Plus
3R 32079331 3R 30006891..30007085 1278..1084 255 75.4 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:48:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 17752969..17753278 777..1086 1535 99.6 Plus
2R 25260384 2R 17753333..17753635 1082..1384 1515 100 Plus
2R 25260384 2R 17751970..17752270 136..436 1505 100 Plus
2R 25260384 2R 17754138..17754420 1701..1983 1400 99.6 Plus
2R 25260384 2R 17752329..17752556 436..663 1140 100 Plus
2R 25260384 2R 17753904..17754076 1529..1701 865 100 Plus
2R 25260384 2R 17753698..17753843 1385..1530 730 100 Plus
2R 25260384 2R 17751514..17751649 1..136 680 100 Plus
2R 25260384 2R 17752629..17752744 662..777 580 100 Plus
3R 31820162 3R 29747722..29747916 1278..1084 255 75.3 Minus
Blast to na_te.dros performed on 2019-03-16 20:39:09 has no hits.

LD38576.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:40:23 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 13637444..13637579 1..136 99 -> Plus
chr2R 13637898..13638197 137..436 98 -> Plus
chr2R 13638257..13638481 437..661 100 -> Plus
chr2R 13638556..13638671 662..777 99 -> Plus
chr2R 13638897..13639200 778..1081 99 -> Plus
chr2R 13639260..13639562 1082..1384 99 -> Plus
chr2R 13639625..13639770 1385..1530 100 -> Plus
chr2R 13639833..13640003 1531..1701 100 -> Plus
chr2R 13640066..13640340 1702..1976 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:20:51 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
CG5002-RA 1..1788 121..1908 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:12:27 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
CG5002-RA 1..1788 121..1908 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:25:37 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
CG5002-RA 1..1788 121..1908 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:43:33 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
CG5002-RA 1..1788 121..1908 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:09:15 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
CG5002-RA 1..1788 121..1908 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:04:38 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
CG5002-RA 18..1993 1..1976 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:12:27 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
CG5002-RA 18..1993 1..1976 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:25:37 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
CG5002-RA 23..1998 1..1976 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:43:33 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
CG5002-RA 18..1993 1..1976 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:09:15 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
CG5002-RA 23..1998 1..1976 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:40:23 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17750315..17750450 1..136 100 -> Plus
2R 17750772..17751071 137..436 100 -> Plus
2R 17751131..17751355 437..661 100 -> Plus
2R 17751430..17751545 662..777 100 -> Plus
2R 17751771..17752074 778..1081 100 -> Plus
2R 17752134..17752436 1082..1384 100 -> Plus
2R 17752499..17752644 1385..1530 100 -> Plus
2R 17752707..17752877 1531..1701 100 -> Plus
2R 17752940..17753214 1702..1976 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:40:23 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17750315..17750450 1..136 100 -> Plus
2R 17750772..17751071 137..436 100 -> Plus
2R 17751131..17751355 437..661 100 -> Plus
2R 17751430..17751545 662..777 100 -> Plus
2R 17751771..17752074 778..1081 100 -> Plus
2R 17752134..17752436 1082..1384 100 -> Plus
2R 17752499..17752644 1385..1530 100 -> Plus
2R 17752707..17752877 1531..1701 100 -> Plus
2R 17752940..17753214 1702..1976 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:40:23 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17750315..17750450 1..136 100 -> Plus
2R 17750772..17751071 137..436 100 -> Plus
2R 17751131..17751355 437..661 100 -> Plus
2R 17751430..17751545 662..777 100 -> Plus
2R 17751771..17752074 778..1081 100 -> Plus
2R 17752134..17752436 1082..1384 100 -> Plus
2R 17752499..17752644 1385..1530 100 -> Plus
2R 17752707..17752877 1531..1701 100 -> Plus
2R 17752940..17753214 1702..1976 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:25:37 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13640445..13640719 1702..1976 100   Plus
arm_2R 13637820..13637955 1..136 100 -> Plus
arm_2R 13638277..13638576 137..436 100 -> Plus
arm_2R 13638636..13638860 437..661 100 -> Plus
arm_2R 13638935..13639050 662..777 100 -> Plus
arm_2R 13639276..13639579 778..1081 100 -> Plus
arm_2R 13639639..13639941 1082..1384 100 -> Plus
arm_2R 13640004..13640149 1385..1530 100 -> Plus
arm_2R 13640212..13640382 1531..1701 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:21:16 Download gff for LD38576.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17751514..17751649 1..136 100 -> Plus
2R 17754139..17754413 1702..1976 100   Plus
2R 17751971..17752270 137..436 100 -> Plus
2R 17752330..17752554 437..661 100 -> Plus
2R 17752629..17752744 662..777 100 -> Plus
2R 17752970..17753273 778..1081 100 -> Plus
2R 17753333..17753635 1082..1384 100 -> Plus
2R 17753698..17753843 1385..1530 100 -> Plus
2R 17753906..17754076 1531..1701 100 -> Plus

LD38576.pep Sequence

Translation from 120 to 1907

> LD38576.pep
MRADEDNLYREQLPNVSTLIRDGGRKLCRPSTVTNKFPILKWLPRYRLEY
IMQDFIAGFTVGLTTIPQAIAYGVVAGLEPQYGLYSAFMGCFTYIVFGSC
KDVTIATTAIMALMVNQYATISPDYAVLVCFLAGCIVLLLGLLNMGVLVR
FISIPVITGFTMAAATTIGSAQINNIVGLTSPSNDLLPAWKNFFTHLTSI
RLWDALLGVSSLVFLLLMTRVKDIKWGNRIFWKYLGLSRNALAVIFGTFL
AYILSRDGNQPFRVTGNITAGVPPFRLPPFSTTVDGEYVSFGEMISTVGA
SLGSIPLISILEIVAISKAFSKGKIVDASQEMVALGMCNIMGSFVLSMPV
TGSFTRTAVNNASGVKTPLGGAVTGALVLMALAFLTQTFYFIPKCTLAAI
IIAAMISLVELHKIKDMWKSKKKDLFPFVVTVLTCMFWSLEYGILCGIGA
NMVYILYSSARPHVDIKLEKINGHEVSVVDVKQKLDYASAEYLKEKVVRF
LNNQNGETQLVVIKGEEINSIDYTVAMNIVSMKGDLEALNCAMICWNWNI
ASAGVVCRLNNDLRPIFKFDLSLEEVVAGHFDSPSNTASTVTIEA*

LD38576.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:43:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11671-PA 595 GF11671-PA 1..595 1..595 2961 93.9 Plus
Dana\GF16211-PA 602 GF16211-PA 1..599 1..594 1620 53.4 Plus
Dana\GF16995-PA 650 GF16995-PA 52..607 14..547 1060 41.4 Plus
Dana\GF22913-PA 676 GF22913-PA 65..625 24..563 957 38.3 Plus
Dana\GF23321-PA 637 GF23321-PA 65..622 29..567 858 38.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21820-PA 595 GG21820-PA 1..595 1..595 3104 98.2 Plus
Dere\GG11977-PA 602 GG11977-PA 1..583 1..577 1714 56.9 Plus
Dere\GG11325-PA 657 GG11325-PA 59..614 14..547 1024 41.2 Plus
Dere\GG11762-PA 676 GG11762-PA 65..669 24..595 947 36.3 Plus
Dere\GG11924-PA 638 GG11924-PA 40..625 10..572 846 37.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22023-PA 604 GH22023-PA 1..596 1..595 2710 83.2 Plus
Dgri\GH22159-PA 622 GH22159-PA 5..583 4..577 1621 55.4 Plus
Dgri\GH11373-PA 675 GH11373-PA 66..610 24..547 946 38.9 Plus
Dgri\GH14173-PA 675 GH14173-PA 64..608 24..547 925 37.6 Plus
Dgri\GH14116-PA 637 GH14116-PA 37..622 1..567 882 37.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG5002-PA 595 CG5002-PA 1..595 1..595 3043 100 Plus
CG7912-PA 602 CG7912-PA 1..583 1..577 1747 57.1 Plus
Esp-PB 654 CG7005-PB 56..611 14..547 1039 41.1 Plus
Esp-PA 654 CG7005-PA 56..611 14..547 1039 41.1 Plus
CG9702-PB 676 CG9702-PB 66..667 25..593 935 36.5 Plus
CG9702-PA 676 CG9702-PA 66..667 25..593 935 36.5 Plus
CG6928-PD 579 CG6928-PD 12..538 38..543 910 38.4 Plus
CG6928-PC 579 CG6928-PC 12..538 38..543 910 38.4 Plus
CG6928-PA 612 CG6928-PA 12..538 38..543 910 38.4 Plus
CG6928-PB 612 CG6928-PB 12..538 38..543 910 38.4 Plus
CG9702-PC 672 CG9702-PC 66..663 25..593 909 36.2 Plus
CG9717-PA 638 CG9717-PA 41..622 11..567 908 38.4 Plus
CG6125-PC 611 CG6125-PC 58..494 40..470 813 38.5 Plus
CG6125-PB 611 CG6125-PB 58..494 40..470 813 38.5 Plus
CG6125-PA 640 CG6125-PA 87..523 40..470 813 38.5 Plus
CG5404-PA 627 CG5404-PA 50..554 38..536 763 32.5 Plus
Prestin-PA 742 CG5485-PA 78..562 34..463 354 23.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:43:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19112-PA 604 GI19112-PA 1..595 1..594 2697 83.9 Plus
Dmoj\GI21965-PA 603 GI21965-PA 5..583 5..589 1684 53.4 Plus
Dmoj\GI23990-PA 657 GI23990-PA 62..615 10..547 1004 39.8 Plus
Dmoj\GI18078-PA 670 GI18078-PA 67..667 27..593 962 37.5 Plus
Dmoj\GI24866-PA 676 GI24866-PA 66..610 24..547 896 37.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:43:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17220-PA 595 GL17220-PA 1..595 1..595 2871 91.3 Plus
Dper\GL13488-PA 595 GL13488-PA 1..577 1..577 1616 56.4 Plus
Dper\GL13790-PA 624 GL13790-PA 59..575 10..507 939 40.2 Plus
Dper\GL17958-PA 617 GL17958-PA 11..535 37..540 864 38.4 Plus
Dper\GL14003-PA 634 GL14003-PA 31..621 2..569 820 36.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25047-PA 595 GA25047-PA 1..595 1..595 2891 91.6 Plus
Dpse\GA20680-PA 597 GA20680-PA 1..579 1..577 1663 57.4 Plus
Dpse\GA20023-PA 655 GA20023-PA 59..612 10..547 1034 40.3 Plus
Dpse\GA21975-PA 675 GA21975-PA 66..657 25..579 930 38.1 Plus
Dpse\GA19961-PA 617 GA19961-PA 11..535 37..540 864 38.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:43:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21821-PA 595 GM21821-PA 1..595 1..595 3115 98.8 Plus
Dsec\GM12195-PA 603 GM12195-PA 1..600 1..594 1668 55.2 Plus
Dsec\GM12894-PA 676 GM12894-PA 65..669 24..595 953 36.8 Plus
Dsec\GM26633-PA 621 GM26633-PA 57..578 14..547 941 39.3 Plus
Dsec\GM12143-PA 638 GM12143-PA 40..622 10..567 854 38.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:43:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11313-PA 595 GD11313-PA 1..595 1..595 3135 99.3 Plus
Dsim\GD17465-PA 602 GD17465-PA 1..583 1..577 1652 56.4 Plus
Dsim\GD21136-PA 654 GD21136-PA 56..611 14..547 1047 41.1 Plus
Dsim\GD21533-PA 687 GD21533-PA 65..680 24..595 907 35.7 Plus
Dsim\GD16947-PA 638 GD16947-PA 40..622 10..567 859 38.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:43:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22242-PA 627 GJ22242-PA 31..618 6..594 2649 84.2 Plus
Dvir\GJ14324-PA 599 GJ14324-PA 5..596 5..594 1625 53.7 Plus
Dvir\GJ24510-PA 677 GJ24510-PA 66..610 24..547 931 37.3 Plus
Dvir\GJ16697-PA 679 GJ16697-PA 71..660 26..594 928 37.1 Plus
Dvir\GJ23000-PA 632 GJ23000-PA 46..618 23..567 882 38.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22031-PA 596 GK22031-PA 1..593 1..593 2753 88 Plus
Dwil\GK13374-PA 595 GK13374-PA 1..582 1..577 1736 58.6 Plus
Dwil\GK22488-PA 656 GK22488-PA 69..613 20..547 1012 40.9 Plus
Dwil\GK14145-PA 674 GK14145-PA 68..627 25..563 972 38.6 Plus
Dwil\GK16963-PA 614 GK16963-PA 11..538 37..543 861 38.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11896-PA 595 GE11896-PA 1..595 1..595 3109 98.3 Plus
Dyak\GE23427-PA 602 GE23427-PA 1..583 1..577 1677 57.1 Plus
Dyak\GE23521-PA 654 GE23521-PA 56..611 14..547 1044 41 Plus
Dyak\GE10890-PA 676 GE10890-PA 65..669 24..595 956 37.4 Plus
Dyak\GE23374-PA 638 GE23374-PA 40..622 10..567 850 37.8 Plus

LD38576.hyp Sequence

Translation from 120 to 1907

> LD38576.hyp
MRADEDNLYREQLPNVSTLIRDGGRKLCRPSTVTNKFPILKWLPRYRLEY
IMQDFIAGFTVGLTTIPQAIAYGVVAGLEPQYGLYSAFMGCFTYIVFGSC
KDVTIATTAIMALMVNQYATISPDYAVLVCFLAGCIVLLLGLLNMGVLVR
FISIPVITGFTMAAATTIGSAQINNIVGLTSPSNDLLPAWKNFFTHLTSI
RLWDALLGVSSLVFLLLMTRVKDIKWGNRIFWKYLGLSRNALAVIFGTFL
AYILSRDGNQPFRVTGNITAGVPPFRLPPFSTTVDGEYVSFGEMISTVGA
SLGSIPLISILEIVAISKAFSKGKIVDASQEMVALGMCNIMGSFVLSMPV
TGSFTRTAVNNASGVKTPLGGAVTGALVLMALAFLTQTFYFIPKCTLAAI
IIAAMISLVELHKIKDMWKSKKKDLFPFVVTVLTCMFWSLEYGILCGIGA
NMVYILYSSARPHVDIKLEKINGHEVSVVDVKQKLDYASAEYLKEKVVRF
LNNQNGETQLVVIKGEEINSIDYTVAMNIVSMKGDLEALNCAMICWNWNI
ASAGVVCRLNNDLRPIFKFDLSLEEVVAGHFDSPSNTASTVTIEA*

LD38576.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG5002-PA 595 CG5002-PA 1..595 1..595 3043 100 Plus
CG7912-PA 602 CG7912-PA 1..583 1..577 1747 57.1 Plus
Esp-PB 654 CG7005-PB 56..611 14..547 1039 41.1 Plus
Esp-PA 654 CG7005-PA 56..611 14..547 1039 41.1 Plus
CG9702-PB 676 CG9702-PB 66..667 25..593 935 36.5 Plus