BDGP Sequence Production Resources |
Search the DGRC for LD38670
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 386 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4645-RA |
Protein status: | LD38670.pep: gold |
Preliminary Size: | 1561 |
Sequenced Size: | 1369 |
Gene | Date | Evidence |
---|---|---|
CG4645 | 2001-01-01 | Release 2 assignment |
CG4645 | 2001-09-19 | Blastp of sequenced clone |
CG4645 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4645 | 2008-04-29 | Release 5.5 accounting |
CG4645 | 2008-08-15 | Release 5.9 accounting |
CG4645 | 2008-12-18 | 5.12 accounting |
1369 bp (1369 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058677
> LD38670.complete ATTTTTTTGGGCCAAGTGCAAAATACGTGTAATATTTACAATTAGCAAAA CGAAACCAATCTAGTCGAGCCGAAATCTAAATGGAGACACCCATGGCCGA TGACCTGTTGCAGTTCCGCGACTACAGCGGCGGTGCCCCGGCCCAAATCA ATGTCAATTCCCCTACGCACGGCGGATCGGGTGGTTCTGGTGGTGGCTCT GCTGGTTCCGGCGGCTCCGTTGGCGGTGGTGGTGCCAACGCACAGCGTCA ACGCGGCGATCCGCTGGCGGATCTCATCTATGACATGACCTCCTCGGCCC AGGGATTCTCCGGAGCTGCATCCTCGGGCGGCTCCCAGCCGCAGAACTCA TCGCTGGACGGATCCGCCGGCGGTGGAGGCGGTGGTGCGAAACTATCACT GTTTACGATCGAGTACTACCAGCAGTTCTTCAACGTGGACACCTATATGG TGCTCGAGCGAATCGCCAACTCCATGATACCCAAACGGGCCTCTGGCAAC TATCTGCGCATGAACATCGGCGAGAATCCGGATCTATATGGACCCTTCTG GATAACCGTCACCCTGATCTTTTCCATAGCAATAAGTGGTAATATTGCCA GCTATTTGCAGCAAGCCACTGATGCGTACAAATGGCACTACAACTTCCAT CTGGTCTCCTATGCGGCTACGTCCATCTTCTTGTATGCCAATATCTTGCC AGCCGTTCTGTGGGCCCTCTTCAAGTACAGCCTGAAGCCTGTGGACTCCG CTGATGCCGTGGAAACGGACAGCGCCAGCTACATGCCGAGCCTCTTGTCG CTGATGTGCATCTATGGATACAGTTTGGCCATTTATATACCAGTCTCCAT TCTCTGGGTGATCAATATCTCTCTGCTGCAGTGGCTCCTGGTGATCACCG CCGCCTTGCTTTCGGGCACGGTTTTGATTGCGGTGCTAACGCCAGCGCTG CGCAACTCGCAATTCTCGCTGTTCCTCATCGTTGGAATCCTGAGTGCACA TGTGGTGCTGGCCGCCGGATTTCTGCTCTATTTCTTTCACAATCCCACAG TCCCGTCGCTGGATCCAGTTGCTCCGACACCAGCTGCACCTGCTGCTCCG GCTGCTCTGAAAGCCGTGACGCAGGCGGTTGTCAACGCAGTGCCCGGCAA TCAGACCCACTAGGATGCATTCCGCGAGAAACCAGTTCGTCAACGTCGCT GAACTAAGCTGTAAATTAAGTTGTCCCTATTTTTATATTCGCTAGAGAGC TGATCACGTTGGTTCCAGCTTCGTGGTTTGTATTCACTTTCAATAACTTT TTCGCGACTGTATATTCATATTATCTTAAAGGTAGATGTACGTGTAATAC CAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4645-RA | 1697 | CG4645-RA | 171..1537 | 1..1367 | 6820 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 12801046..12801611 | 1..566 | 2830 | 100 | Plus |
chrX | 22417052 | chrX | 12802336..12802820 | 867..1351 | 2425 | 100 | Plus |
chrX | 22417052 | chrX | 12801675..12801883 | 566..774 | 1045 | 100 | Plus |
chrX | 22417052 | chrX | 12801947..12802039 | 774..866 | 450 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 12910123..12910688 | 1..566 | 2830 | 100 | Plus |
X | 23542271 | X | 12911413..12911913 | 867..1367 | 2490 | 99.8 | Plus |
X | 23542271 | X | 12910752..12910960 | 566..774 | 1045 | 100 | Plus |
X | 23542271 | X | 12911024..12911116 | 774..866 | 465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 12918221..12918786 | 1..566 | 2830 | 100 | Plus |
X | 23527363 | X | 12919511..12920011 | 867..1367 | 2490 | 99.8 | Plus |
X | 23527363 | X | 12918850..12919058 | 566..774 | 1045 | 100 | Plus |
X | 23527363 | X | 12919122..12919214 | 774..866 | 465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 4804..4847 | 8..51 | 112 | 72.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 12801947..12802039 | 774..866 | 98 | -> | Plus |
chrX | 12801046..12801611 | 1..566 | 100 | -> | Plus |
chrX | 12801676..12801882 | 567..773 | 100 | -> | Plus |
chrX | 12802336..12802820 | 867..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4645-RA | 1..1083 | 81..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4645-RA | 1..1083 | 81..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4645-RA | 1..1083 | 81..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4645-RA | 1..1083 | 81..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4645-RA | 1..1083 | 81..1163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4645-RA | 171..1521 | 1..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4645-RA | 171..1521 | 1..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4645-RA | 171..1521 | 1..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4645-RA | 171..1521 | 1..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4645-RA | 171..1521 | 1..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12910123..12910688 | 1..566 | 100 | -> | Plus |
X | 12910753..12910959 | 567..773 | 100 | -> | Plus |
X | 12911024..12911116 | 774..866 | 100 | -> | Plus |
X | 12911413..12911897 | 867..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12910123..12910688 | 1..566 | 100 | -> | Plus |
X | 12910753..12910959 | 567..773 | 100 | -> | Plus |
X | 12911024..12911116 | 774..866 | 100 | -> | Plus |
X | 12911413..12911897 | 867..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12910123..12910688 | 1..566 | 100 | -> | Plus |
X | 12910753..12910959 | 567..773 | 100 | -> | Plus |
X | 12911024..12911116 | 774..866 | 100 | -> | Plus |
X | 12911413..12911897 | 867..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 12805057..12805149 | 774..866 | 100 | -> | Plus |
arm_X | 12804786..12804992 | 567..773 | 100 | -> | Plus |
arm_X | 12804156..12804721 | 1..566 | 100 | -> | Plus |
arm_X | 12805446..12805930 | 867..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12918221..12918786 | 1..566 | 100 | -> | Plus |
X | 12918851..12919057 | 567..773 | 100 | -> | Plus |
X | 12919122..12919214 | 774..866 | 100 | -> | Plus |
X | 12919511..12919995 | 867..1351 | 100 | Plus |
Translation from 80 to 1162
> LD38670.pep METPMADDLLQFRDYSGGAPAQINVNSPTHGGSGGSGGGSAGSGGSVGGG GANAQRQRGDPLADLIYDMTSSAQGFSGAASSGGSQPQNSSLDGSAGGGG GGAKLSLFTIEYYQQFFNVDTYMVLERIANSMIPKRASGNYLRMNIGENP DLYGPFWITVTLIFSIAISGNIASYLQQATDAYKWHYNFHLVSYAATSIF LYANILPAVLWALFKYSLKPVDSADAVETDSASYMPSLLSLMCIYGYSLA IYIPVSILWVINISLLQWLLVITAALLSGTVLIAVLTPALRNSQFSLFLI VGILSAHVVLAAGFLLYFFHNPTVPSLDPVAPTPAAPAAPAALKAVTQAV VNAVPGNQTH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21391-PA | 356 | GF21391-PA | 1..356 | 1..360 | 1351 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17742-PA | 361 | GG17742-PA | 1..361 | 1..360 | 1532 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24422-PA | 350 | GH24422-PA | 1..344 | 1..355 | 1248 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4645-PB | 360 | CG4645-PB | 1..360 | 1..360 | 1845 | 100 | Plus |
CG4645-PC | 360 | CG4645-PC | 1..360 | 1..360 | 1845 | 100 | Plus |
CG4645-PA | 360 | CG4645-PA | 1..360 | 1..360 | 1845 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16281-PA | 365 | GI16281-PA | 1..364 | 1..359 | 1269 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22972-PA | 178 | GL22972-PA | 17..178 | 197..360 | 655 | 79.9 | Plus |
Dper\GL22971-PA | 127 | GL22971-PA | 1..127 | 1..123 | 303 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18325-PA | 362 | GA18325-PA | 1..362 | 1..360 | 1352 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11589-PA | 356 | GM11589-PA | 1..356 | 1..360 | 1775 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16517-PA | 350 | GJ16517-PA | 1..349 | 1..359 | 1253 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25646-PA | 362 | GK25646-PA | 1..362 | 1..360 | 1282 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17032-PA | 358 | GE17032-PA | 1..358 | 1..360 | 1522 | 91.5 | Plus |
Translation from 80 to 1162
> LD38670.hyp METPMADDLLQFRDYSGGAPAQINVNSPTHGGSGGSGGGSAGSGGSVGGG GANAQRQRGDPLADLIYDMTSSAQGFSGAASSGGSQPQNSSLDGSAGGGG GGAKLSLFTIEYYQQFFNVDTYMVLERIANSMIPKRASGNYLRMNIGENP DLYGPFWITVTLIFSIAISGNIASYLQQATDAYKWHYNFHLVSYAATSIF LYANILPAVLWALFKYSLKPVDSADAVETDSASYMPSLLSLMCIYGYSLA IYIPVSILWVINISLLQWLLVITAALLSGTVLIAVLTPALRNSQFSLFLI VGILSAHVVLAAGFLLYFFHNPTVPSLDPVAPTPAAPAAPAALKAVTQAV VNAVPGNQTH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4645-PB | 360 | CG4645-PB | 1..360 | 1..360 | 1845 | 100 | Plus |
CG4645-PC | 360 | CG4645-PC | 1..360 | 1..360 | 1845 | 100 | Plus |
CG4645-PA | 360 | CG4645-PA | 1..360 | 1..360 | 1845 | 100 | Plus |