BDGP Sequence Production Resources |
Search the DGRC for LD38682
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 386 |
Well: | 82 |
Vector: | pOT2 |
Associated Gene/Transcript | dgt3-RB |
Protein status: | LD38682.pep: validated full length |
Preliminary Size: | 1863 |
Sequenced Size: | 1765 |
Gene | Date | Evidence |
---|---|---|
CG3221 | 2001-01-01 | Release 2 assignment |
CG3221 | 2001-09-19 | Blastp of sequenced clone |
CG3221 | 2003-01-01 | Sim4 clustering to Release 3 |
dgt3 | 2008-04-29 | Release 5.5 accounting |
dgt3 | 2008-08-15 | Release 5.9 accounting |
dgt3 | 2008-12-18 | 5.12 accounting |
1765 bp (1765 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058678
> LD38682.complete CGATCTGCTGAGCAACTCGGAATTCTTCAAGAAGCTGGGAGTGGACAGCT CGAACCAGTGGATTCTGTACGATGAGCAGATGGAGATGTTCTTCAAGTTC CTGTCCGGGAACATCACGGATGCAAATATCCTCACAGAGCGACAGGTTCT GGAGCGGGAGGAGATGCAGCGGCGGGGCGAGTGGCTAAGTGCTTCGGATC GCGAGCTCAAGCTCCTGCAAATCGAGGCCGAAAGTCCGGGGCTTCTCAAC TACAAGCAGCAGGATGTCGACGCCTTGACCATGAGCATTGAGGCGATCGA AGATGCCTCAAGGGATTATGCTACGCTTCTGGAAGATATGATGACCACAA AGCACTCGATAACTAAGCACCTAGGCGAGGTGGAGTGCGTCACCGCCGAG TTGCAACTGAGGGAGAAGGATCTGATAGCCGAGTGCCAGTCCAAAGCCAA GCAACTGGAGGAACTGCAGCAGGAGAACTGCCGGCTAAGCGCCGAAGCCA AAAAGGCATTCACCGCCCCACAGTTGCCGCCTCTATTCATGCATCAACTG CCATTGGAGCAGTATTTCCACAAATGCGATTCATTTATGCAATACTTTAC TCTGTATGTGAAGGAGAATTTTAAGATCCAGGACTATGATGAGTTCCAGA GCGCGGAGGAAGATCTTGGGCGCGAAAAGGCCAAGCTGGAGGACTTGGAA CGTGGCATCCAGTTTTATGCACTATCCTACATAAGAACAAAGGCCAAGGT GAAGGCCACGCAGTGTCTTATTGACCAGTTGGATCTTGGCAAGATTCACT GCCTCAGTTTAACGGACATGGCGCGTGAAATGCACGATCTGCAGCTGCTC AACGACTATCAACTGAGCAATACACACGATACGCTTTTAAACGATCTAAC CATTCACATTCAGCAGCACACCCAGCGACGTATTGAGCTGGTTCTCTACG AGAACACTAAACTGAAGTTGGAAAGAGCTGTTCGACGTCATGAAAGCGAC AAGAAGCTCACTAAAATCATCTCAGATGCTCTGTCCAATGCGGAATTGCT GTGGATTGCGATCCAACTGGACTGCGACAAGAAGCGCAACTGCCTGGACA CTTCGGAGGAGTTGCGCGACCAAGCGCAGGCCACTTGGCAAAGAATCCAG ACCATGCGCTCCATTAACGCCAGTTATCAGGGCATTTGTGCCCAGTTTGT GCAGGAGATTGCCAATTTGTTGTCAGCCCACTTGGGACAGAACATAAAGG CAACTGAGGCCAAGGCTTGTCTCTTCGAATACGAAAAGTTCGGTCGCCTG CTGTCTTACTCCTTTCAGAGCATGCTGAACCGAAAGTCGTGTGCTGCTGT TCAGGATCAACTGGCAGAACTCAAGCGCTTGGAGCAGACTTTGCGGCCGT TTGTCTATGATTCCCCATTGGAGCAGCCCATGTTTGAGAACGTTCGCTAC TTGAGCGCCATATACAATGTCACCCAGCAGCAAACTCGCCTGGATGAGTC AGGGCGTTCCTTGCGAAAAGATTTCCTGGAAAATGTCGTGGGGCGCATTG AGCGGGATAAACTGTATCGCTATAGCGTAGTCCTGTGGATTTGGTTTCTC ACTGAGCCGCAGCGCATGATGCATGCAATTGATGAGGTCAAAAAGGCAGC CGCTGCAGTAATTCGTCCAGGTGGTGGTCTGCACCGCAAGTGAACTTAGT TGATTTAGAATCTGGTCAGTAAATAAATGTTAAATTATTCAAAAATAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dgt3-RB | 1909 | dgt3-RB | 64..1812 | 1..1749 | 8745 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 16879201..16879867 | 1371..705 | 3260 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 16879928..16880290 | 705..343 | 1815 | 100 | Minus |
chr2R | 21145070 | chr2R | 16880351..16880680 | 343..14 | 1590 | 98.8 | Minus |
chr2R | 21145070 | chr2R | 16878704..16878900 | 1746..1550 | 985 | 100 | Minus |
chr2R | 21145070 | chr2R | 16878964..16879142 | 1550..1372 | 850 | 98.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 20992774..20993440 | 1371..705 | 3335 | 100 | Minus |
2R | 25286936 | 2R | 20993501..20993863 | 705..343 | 1815 | 100 | Minus |
2R | 25286936 | 2R | 20993925..20994254 | 343..14 | 1650 | 100 | Minus |
2R | 25286936 | 2R | 20992273..20992472 | 1749..1550 | 1000 | 100 | Minus |
2R | 25286936 | 2R | 20992536..20992714 | 1550..1372 | 895 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 20993973..20994639 | 1371..705 | 3335 | 100 | Minus |
2R | 25260384 | 2R | 20994700..20995062 | 705..343 | 1815 | 100 | Minus |
2R | 25260384 | 2R | 20995124..20995453 | 343..14 | 1650 | 100 | Minus |
2R | 25260384 | 2R | 20993472..20993671 | 1749..1550 | 1000 | 100 | Minus |
2R | 25260384 | 2R | 20993735..20993913 | 1550..1372 | 895 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 16878704..16878900 | 1550..1746 | 100 | <- | Minus |
chr2R | 16878965..16879142 | 1372..1549 | 98 | <- | Minus |
chr2R | 16879201..16879866 | 706..1371 | 99 | <- | Minus |
chr2R | 16879928..16880290 | 343..705 | 100 | <- | Minus |
chr2R | 16880352..16880680 | 14..342 | 98 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt3-RB | 6..1698 | 1..1693 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt3-RB | 6..1698 | 1..1693 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt3-RB | 6..1698 | 1..1693 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt3-RB | 6..1698 | 1..1693 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt3-RB | 6..1698 | 1..1693 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt3-RB | 19..1764 | 1..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt3-RB | 19..1764 | 1..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt3-RB | 64..1809 | 1..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt3-RB | 19..1764 | 1..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt3-RB | 64..1809 | 1..1746 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20992276..20992472 | 1550..1746 | 100 | <- | Minus |
2R | 20992537..20992714 | 1372..1549 | 100 | <- | Minus |
2R | 20992774..20993439 | 706..1371 | 100 | <- | Minus |
2R | 20993501..20993863 | 343..705 | 100 | <- | Minus |
2R | 20993926..20994254 | 14..342 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20992276..20992472 | 1550..1746 | 100 | <- | Minus |
2R | 20992537..20992714 | 1372..1549 | 100 | <- | Minus |
2R | 20992774..20993439 | 706..1371 | 100 | <- | Minus |
2R | 20993501..20993863 | 343..705 | 100 | <- | Minus |
2R | 20993926..20994254 | 14..342 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20992276..20992472 | 1550..1746 | 100 | <- | Minus |
2R | 20992537..20992714 | 1372..1549 | 100 | <- | Minus |
2R | 20992774..20993439 | 706..1371 | 100 | <- | Minus |
2R | 20993501..20993863 | 343..705 | 100 | <- | Minus |
2R | 20993926..20994254 | 14..342 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 16880042..16880219 | 1372..1549 | 100 | <- | Minus |
arm_2R | 16879781..16879977 | 1550..1746 | 100 | <- | Minus |
arm_2R | 16880279..16880944 | 706..1371 | 100 | <- | Minus |
arm_2R | 16881006..16881368 | 343..705 | 100 | <- | Minus |
arm_2R | 16881431..16881759 | 14..342 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20993973..20994638 | 706..1371 | 100 | <- | Minus |
2R | 20994700..20995062 | 343..705 | 100 | <- | Minus |
2R | 20995125..20995453 | 14..342 | 100 | <- | Minus |
2R | 20993736..20993913 | 1372..1549 | 100 | <- | Minus |
2R | 20993475..20993671 | 1550..1746 | 100 | <- | Minus |
Translation from 0 to 1692
> LD38682.hyp DLLSNSEFFKKLGVDSSNQWILYDEQMEMFFKFLSGNITDANILTERQVL EREEMQRRGEWLSASDRELKLLQIEAESPGLLNYKQQDVDALTMSIEAIE DASRDYATLLEDMMTTKHSITKHLGEVECVTAELQLREKDLIAECQSKAK QLEELQQENCRLSAEAKKAFTAPQLPPLFMHQLPLEQYFHKCDSFMQYFT LYVKENFKIQDYDEFQSAEEDLGREKAKLEDLERGIQFYALSYIRTKAKV KATQCLIDQLDLGKIHCLSLTDMAREMHDLQLLNDYQLSNTHDTLLNDLT IHIQQHTQRRIELVLYENTKLKLERAVRRHESDKKLTKIISDALSNAELL WIAIQLDCDKKRNCLDTSEELRDQAQATWQRIQTMRSINASYQGICAQFV QEIANLLSAHLGQNIKATEAKACLFEYEKFGRLLSYSFQSMLNRKSCAAV QDQLAELKRLEQTLRPFVYDSPLEQPMFENVRYLSAIYNVTQQQTRLDES GRSLRKDFLENVVGRIERDKLYRYSVVLWIWFLTEPQRMMHAIDEVKKAA AAVIRPGGGLHRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dgt3-PB | 565 | CG3221-PB | 3..565 | 1..563 | 2883 | 100 | Plus |
Translation from 79 to 1692
> LD38682.pep MEMFFKFLSGNITDANILTERQVLEREEMQRRGEWLSASDRELKLLQIEA ESPGLLNYKQQDVDALTMSIEAIEDASRDYATLLEDMMTTKHSITKHLGE VECVTAELQLREKDLIAECQSKAKQLEELQQENCRLSAEAKKAFTAPQLP PLFMHQLPLEQYFHKCDSFMQYFTLYVKENFKIQDYDEFQSAEEDLGREK AKLEDLERGIQFYALSYIRTKAKVKATQCLIDQLDLGKIHCLSLTDMARE MHDLQLLNDYQLSNTHDTLLNDLTIHIQQHTQRRIELVLYENTKLKLERA VRRHESDKKLTKIISDALSNAELLWIAIQLDCDKKRNCLDTSEELRDQAQ ATWQRIQTMRSINASYQGICAQFVQEIANLLSAHLGQNIKATEAKACLFE YEKFGRLLSYSFQSMLNRKSCAAVQDQLAELKRLEQTLRPFVYDSPLEQP MFENVRYLSAIYNVTQQQTRLDESGRSLRKDFLENVVGRIERDKLYRYSV VLWIWFLTEPQRMMHAIDEVKKAAAAVIRPGGGLHRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12731-PA | 565 | GF12731-PA | 29..565 | 1..537 | 2271 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20816-PA | 565 | GG20816-PA | 29..565 | 1..537 | 2692 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11813-PA | 574 | GH11813-PA | 29..574 | 1..537 | 1665 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dgt3-PB | 565 | CG3221-PB | 29..565 | 1..537 | 2747 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15999-PA | 572 | GI15999-PA | 30..572 | 2..537 | 1795 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10192-PA | 573 | GL10192-PA | 29..573 | 1..537 | 1915 | 67.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16759-PA | 573 | GA16759-PA | 29..573 | 1..537 | 1902 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15762-PA | 565 | GM15762-PA | 29..565 | 1..537 | 2820 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25237-PA | 565 | GD25237-PA | 29..565 | 1..537 | 2830 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18725-PA | 572 | GJ18725-PA | 29..572 | 1..537 | 1813 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23253-PA | 571 | GK23253-PA | 29..571 | 1..537 | 1527 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13755-PA | 565 | GE13755-PA | 29..565 | 1..537 | 2665 | 93.3 | Plus |