BDGP Sequence Production Resources |
Search the DGRC for LD38689
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 386 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1550-RA |
Protein status: | LD38689.pep: gold |
Preliminary Size: | 1947 |
Sequenced Size: | 1986 |
Gene | Date | Evidence |
---|---|---|
CG1550 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1550 | 2002-05-18 | Blastp of sequenced clone |
CG1550 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1550 | 2008-04-29 | Release 5.5 accounting |
CG1550 | 2008-08-15 | Release 5.9 accounting |
CG1550 | 2008-12-18 | 5.12 accounting |
1986 bp (1986 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118960
> LD38689.complete ATACGGTCACTTTAACCGGGTCGTGCTCCAAGAGAATTCCTTTCTGCAAA TGGACGGCATAAACAAGTACAACGAGTTTGTGGCGCTGCACAAGCCACAG CTGGAGTCCTCCGGTATTCCGCTGATATTTTGGCCGGCTCTGTTCCGAAA ACTGACCACGGAAACCTTCGATGCCGGCGAGGCACTCCAGTTGATGCTGA TCGACTACGATGAGGATGAACAGCAGAATCCGGCCGAGGACGATGACAGT CCCAACCCTGTGTTCGCACTGGGCGTAGCCCGGGAGCAGGGCATAAAGGC CAGTGATCCTCAGGCCATCTATTTGGTCGATCACGCCTGGACGTTCCGGC TAAACGGTGCTCGGCAGCAGCTGGAGGAGTATCCGCAACTGGCGGAGCGA CTTTCTGCCATCACTGGCGTTGACCTTGAGCTGAAGGATCGGGTCGACAA GATCCTGCGCCGTCTGTGGAAGTACTGCCACGCCTACTCCATCGGCAGCG AAGGCTTGTCGGACGAGGAGCGCCAGCCCATCTGGTATGTGATGGACGAA GTCGGCTCGGCTGTGAACCACTCGGACGATCCCAACTTTCGACTTGTTCC GCTGCTCTACCTAAACACCCAAACCACATACAGTGTGCTCTTTCCGATTC GGGACTGCGATGTCGGAGAAGCGGTGACCCGCGATATGGTGGAGCACGTG GCAAAGGATGCGCCCCAGCGGCCTGCGCTGCTTTTACCCTGGCGCGATGC CGACCTCACGGGCGAAAGCTTCTTGCAGGTTGAACCCCGGGCAGATTACT TTACCAGCGGTCACATCCCTGAGACCTATCCCAAAGGCGATACTGTTCCA CTGCCAGCCAGGTCACGTTGCGATCCGCTGAAGGTGTATGCAGAGTACGA GGTGGTGCGCCGTCATCTAACTTCGTCCGAGTTCATCCTAGTTAACAACG CAGACGAGGCGGATGTCCTTTGGCTCACACACCACTTCAAGAATTTCGAG GATTTTGCAGATAGGTCGCCCGGCAAGTTCATCAATCAGTTTCCGTTCGA GTACGTGATCACCATCAAGGATCTCCTTAGCATTGTGGGCCGCCGGGCGG CCAAGGAGCACCATGATAGCCTTACGCTTGAAACGTTTCCGGCATGGCTC CCCACCACCTATAATCTGTCCACCGAAGTAAAGGAGTTCGCGGCTTACTA CCAAACGAGAGCAGCCAAGGGCCTCGACAACCACTGGATTATCAAGCCCT GGAACTTGGCTCGCGGATTGGACACACATATCACGGACAACATCAAGCAG ATCGTACGTCTACCGGCCACTGGACCGAAGATAGCGCAGAAGTACATCGA GCGACCAGTTCTCTTTAGTCGGCAGGAGGTGGAAGGCAGCGTTAAGTTCG ATATTCGCTATGTAATCCTGTTGAAAAGCGTCAAACCCCTGAAGGCATAT ATACACCGGAAGTTCTTCCTGCGTTTCGCAAACCATCCCTTCACGCTGGA TCACTTCGATGACTACGAGAAACACTACACGGTGATGAACTACCAGACGG AGGCGCAGCTGCATCACGTCAAGTGCGACGACTTCCTGACGCTCTGGCAG GAACAGTATCCGGATAACGATTGGTCGGCTCTGGAGCAGCAGATCTGTAG CATGCTGCTCGAGGTGCTTCAGTGCGCCAGTCAAGCAGATCCACCCTGCG GCCTGGCTCCTTGTGCCCAATCACGAGCTCTTTACGCAGCCGACATCATG CTGCGGTGGAAGGACGATAAGGAGAAGTTGATGGAGCCCCAGTTGCTGGA AATCAACTGGACTCCGGACTGCAAACGCGCATGCGACTACTATCCCGACT TCTTCAACGACATCTTCCGTCTGCTCTTCCTAGACGAAGAAAACGACGAT AGCTTCCGGGTACTGACGCCAGACAATTGACATTAACCGAGCAAATAAAC CCAGTTATCCCAAAGTTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3697389..3699356 | 1968..1 | 9840 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7810066..7812035 | 1970..1 | 9850 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7811265..7813234 | 1970..1 | 9850 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3697389..3699356 | 1..1968 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1550-RA | 1..1881 | 50..1930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1550-RA | 1..1881 | 50..1930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1550-RA | 1..1881 | 50..1930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1550-RA | 1..1881 | 50..1930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1550-RA | 1..1881 | 50..1930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1550-RA | 1..1961 | 1..1961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1550-RA | 1..1961 | 1..1961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1550-RA | 1..1961 | 8..1968 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1550-RA | 1..1961 | 1..1961 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1550-RA | 1..1961 | 8..1968 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7810068..7812035 | 1..1968 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7810068..7812035 | 1..1968 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7810068..7812035 | 1..1968 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3697573..3699540 | 1..1968 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7811267..7813234 | 1..1968 | 100 | Minus |
Translation from 0 to 1929
> LD38689.hyp YGHFNRVVLQENSFLQMDGINKYNEFVALHKPQLESSGIPLIFWPALFRK LTTETFDAGEALQLMLIDYDEDEQQNPAEDDDSPNPVFALGVAREQGIKA SDPQAIYLVDHAWTFRLNGARQQLEEYPQLAERLSAITGVDLELKDRVDK ILRRLWKYCHAYSIGSEGLSDEERQPIWYVMDEVGSAVNHSDDPNFRLVP LLYLNTQTTYSVLFPIRDCDVGEAVTRDMVEHVAKDAPQRPALLLPWRDA DLTGESFLQVEPRADYFTSGHIPETYPKGDTVPLPARSRCDPLKVYAEYE VVRRHLTSSEFILVNNADEADVLWLTHHFKNFEDFADRSPGKFINQFPFE YVITIKDLLSIVGRRAAKEHHDSLTLETFPAWLPTTYNLSTEVKEFAAYY QTRAAKGLDNHWIIKPWNLARGLDTHITDNIKQIVRLPATGPKIAQKYIE RPVLFSRQEVEGSVKFDIRYVILLKSVKPLKAYIHRKFFLRFANHPFTLD HFDDYEKHYTVMNYQTEAQLHHVKCDDFLTLWQEQYPDNDWSALEQQICS MLLEVLQCASQADPPCGLAPCAQSRALYAADIMLRWKDDKEKLMEPQLLE INWTPDCKRACDYYPDFFNDIFRLLFLDEENDDSFRVLTPDN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1550-PA | 626 | CG1550-PA | 1..626 | 17..642 | 3358 | 100 | Plus |
CG3964-PA | 982 | CG3964-PA | 467..698 | 300..547 | 162 | 25.5 | Plus |
CG3964-PC | 989 | CG3964-PC | 467..698 | 300..547 | 162 | 25.5 | Plus |
CG3964-PB | 989 | CG3964-PB | 467..698 | 300..547 | 162 | 25.5 | Plus |
Translation from 49 to 1929
> LD38689.pep MDGINKYNEFVALHKPQLESSGIPLIFWPALFRKLTTETFDAGEALQLML IDYDEDEQQNPAEDDDSPNPVFALGVAREQGIKASDPQAIYLVDHAWTFR LNGARQQLEEYPQLAERLSAITGVDLELKDRVDKILRRLWKYCHAYSIGS EGLSDEERQPIWYVMDEVGSAVNHSDDPNFRLVPLLYLNTQTTYSVLFPI RDCDVGEAVTRDMVEHVAKDAPQRPALLLPWRDADLTGESFLQVEPRADY FTSGHIPETYPKGDTVPLPARSRCDPLKVYAEYEVVRRHLTSSEFILVNN ADEADVLWLTHHFKNFEDFADRSPGKFINQFPFEYVITIKDLLSIVGRRA AKEHHDSLTLETFPAWLPTTYNLSTEVKEFAAYYQTRAAKGLDNHWIIKP WNLARGLDTHITDNIKQIVRLPATGPKIAQKYIERPVLFSRQEVEGSVKF DIRYVILLKSVKPLKAYIHRKFFLRFANHPFTLDHFDDYEKHYTVMNYQT EAQLHHVKCDDFLTLWQEQYPDNDWSALEQQICSMLLEVLQCASQADPPC GLAPCAQSRALYAADIMLRWKDDKEKLMEPQLLEINWTPDCKRACDYYPD FFNDIFRLLFLDEENDDSFRVLTPDN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11237-PA | 626 | GF11237-PA | 1..625 | 1..625 | 2941 | 85.3 | Plus |
Dana\GF15040-PA | 1003 | GF15040-PA | 479..710 | 284..531 | 165 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10708-PA | 626 | GG10708-PA | 1..626 | 1..626 | 3192 | 93.9 | Plus |
Dere\GG23690-PA | 1068 | GG23690-PA | 575..769 | 284..494 | 169 | 29.8 | Plus |
Dere\GG24974-PA | 988 | GG24974-PA | 466..697 | 284..531 | 166 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21579-PA | 631 | GH21579-PA | 1..630 | 1..626 | 2673 | 78 | Plus |
Dgri\GH16662-PA | 706 | GH16662-PA | 102..448 | 235..590 | 168 | 26.2 | Plus |
Dgri\GH11195-PA | 971 | GH11195-PA | 444..675 | 284..531 | 165 | 26.3 | Plus |
Dgri\GH10942-PA | 720 | GH10942-PA | 371..568 | 391..590 | 162 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TTLL12-PA | 626 | CG1550-PA | 1..626 | 1..626 | 3358 | 100 | Plus |
TTLL4B-PA | 982 | CG3964-PA | 467..698 | 284..531 | 162 | 25.5 | Plus |
TTLL4B-PC | 989 | CG3964-PC | 467..698 | 284..531 | 162 | 25.5 | Plus |
TTLL4B-PB | 989 | CG3964-PB | 467..698 | 284..531 | 162 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19551-PA | 633 | GI19551-PA | 1..630 | 1..626 | 2558 | 75.2 | Plus |
Dmoj\GI18116-PA | 994 | GI18116-PA | 473..704 | 284..531 | 161 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11240-PA | 627 | GL11240-PA | 1..627 | 1..626 | 2746 | 79.4 | Plus |
Dper\GL18685-PA | 977 | GL18685-PA | 455..686 | 284..531 | 167 | 25.5 | Plus |
Dper\GL26212-PA | 795 | GL26212-PA | 429..654 | 370..590 | 159 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13769-PA | 627 | GA13769-PA | 1..627 | 1..626 | 2736 | 79.1 | Plus |
Dpse\GA17808-PA | 983 | GA17808-PA | 458..689 | 284..531 | 168 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20754-PA | 626 | GM20754-PA | 1..626 | 1..626 | 3251 | 95.7 | Plus |
Dsec\GM18785-PA | 559 | GM18785-PA | 66..260 | 284..494 | 170 | 29.8 | Plus |
Dsec\GM18444-PA | 986 | GM18444-PA | 464..695 | 284..531 | 166 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10218-PA | 626 | GD10218-PA | 1..626 | 1..626 | 3262 | 96.2 | Plus |
Dsim\GD15298-PA | 424 | GD15298-PA | 1..405 | 1..405 | 2021 | 92.8 | Plus |
Dsim\GD23261-PA | 986 | GD23261-PA | 464..695 | 284..531 | 166 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21123-PA | 632 | GJ21123-PA | 1..631 | 1..626 | 2583 | 76.5 | Plus |
Dvir\GJ10485-PA | 716 | GJ10485-PA | 135..457 | 257..589 | 167 | 26.8 | Plus |
Dvir\GJ14582-PA | 1058 | GJ14582-PA | 561..755 | 284..494 | 165 | 28.6 | Plus |
Dvir\GJ16303-PA | 1000 | GJ16303-PA | 473..704 | 284..531 | 159 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22076-PA | 630 | GK22076-PA | 1..630 | 1..623 | 2438 | 72.2 | Plus |
Dwil\GK13222-PA | 353 | GK13222-PA | 216..346 | 435..559 | 460 | 65.6 | Plus |
Dwil\GK13222-PA | 353 | GK13222-PA | 4..55 | 85..136 | 211 | 76.9 | Plus |
Dwil\GK15485-PA | 1039 | GK15485-PA | 506..737 | 284..531 | 163 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23607-PA | 618 | GE23607-PA | 1..618 | 1..626 | 3026 | 89.3 | Plus |
Dyak\GE18502-PA | 1068 | GE18502-PA | 575..769 | 284..494 | 170 | 29.8 | Plus |
Dyak\GE18264-PA | 990 | GE18264-PA | 468..699 | 284..531 | 166 | 25.5 | Plus |