BDGP Sequence Production Resources |
Search the DGRC for LD38742
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 387 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6506-RA |
Protein status: | LD38742.pep: gold |
Preliminary Size: | 1448 |
Sequenced Size: | 1303 |
Gene | Date | Evidence |
---|---|---|
CG6506 | 2001-01-01 | Release 2 assignment |
CG6506 | 2002-05-16 | Blastp of sequenced clone |
CG6506 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6506 | 2008-04-29 | Release 5.5 accounting |
CG6506 | 2008-08-15 | Release 5.9 accounting |
CG6506 | 2008-12-18 | 5.12 accounting |
1303 bp (1303 high quality bases) assembled on 2002-05-16
GenBank Submission: AY118561
> LD38742.complete TAAACAACAATATATTGTTAAGTAAATGTTGTACGTAGGTTTTTAAGCGA AATAAACATGCAAACAGAGCACTGGGGCTCGCTGCCCGCAGAGGATGACG GCGGTCAACTGACGCCGGACAAATACGTGCCCACGGCGGCCAAGAAACTT AAGCTGGACGAGATTCGCCAGCGCGGAGATCCGCAACCGCAAGAAAAGCA CCACAAGTTGGAGCTGAGGAGTGCGCTGGTCACCCAGACCATCGAGGTGA TGAAGCAAACCGAGGTGCTGCAGTCCCTCATTGAAACGTACTCCAACAAA AATGGAAGTTCCAATTACCTCTTGAATCCGTGCCTAATGATACCGGAAGT GGACTTTCCGCCGGAGAACGCAGCCGAACTGGTGGGCAGCCAAAAGTTTC AGAAGCCCATTTGGTTCACACCAACCGTGGACACAGCCTACTCTCGCGGG GATCCGGAGGCATATCCGGAGATCCCCAGCTCTGCTTGCCGCCAGGCGAT GCGCAAGGTGATGTGCGGCATGCTGCGCCTGGCCGGCTTCACCGACTGTT CCGAGTCGGCGGTGCAACTGCTGACGGACGCCACCGAGGAGTTCCTGCGC AGCTTTATCGGCGAGTATCGCGGCTACTATGACAGTCAGCCGCGGCTGCA GAATTCCACGGTGCTGCAGCTGGTCCCACTGGAGCGCGCCCATTTCGCCC AAACGGGCACCTCGCTCACCCAGGTGCACAACTACTACAAGCACAAGGTG CTGGCCAGGAATCGCGCGGAGATCGCTGAGTTCAACAGCGTACTGCAGGA GTACGACAAACTGATGAAGGAGAGCCAGAGCAGCATGCAGAAGCAGCACA ACGAGTTCAACGGCCACGACTTTCTCAACATCCTGGACAACAGCGCCACA GGCAGCAGCCAGAGCATAGGCGGCATGGCCATGGGCGATATGCTGCAGGA TCTGGGCGGTAGCACGGGCTCCAGTGGCACAGTCAGCTCCCAGCAGATGC TGTACGGCCTGCTCGATGGCCAGATATCGTCCAATACCTCCAACATGACG GGGACGAGCGGCAATGGCAGCACGGGCGGCAATGGAAATGGCAATGGGGC CACGATTAGCAACTTTCACGCCACTTTTGAAACGTAATTGTTAAAATTGC GGGGATAACTTCATTATCTCACACTGAGATATCTCTAGCAATCAAATGTT TCACACTTTTTATAGAACGACTAAGATCTCTAGGCTCAAGTTAAGTTAAG CTCTAAGGAAACGTACTAATTAAATAGTTTTTATTAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6506-RA | 1361 | CG6506-RA | 64..1349 | 1..1286 | 6430 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 17740256..17741237 | 304..1285 | 4910 | 100 | Plus |
chrX | 22417052 | chrX | 17739832..17740031 | 1..200 | 1000 | 100 | Plus |
chrX | 22417052 | chrX | 17740093..17740203 | 201..311 | 540 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 6198..6263 | 3..68 | 123 | 65.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 17739832..17740031 | 1..200 | 100 | -> | Plus |
chrX | 17740093..17740199 | 201..308 | 98 | -> | Plus |
chrX | 17740261..17741237 | 309..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6506-RA | 1..1080 | 58..1137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6506-RA | 1..1080 | 58..1137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6506-RA | 1..1080 | 58..1137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6506-RA | 1..1080 | 58..1137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6506-RA | 1..1080 | 58..1137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6506-RA | 1..1285 | 1..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6506-RA | 1..1285 | 1..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6506-RA | 25..1309 | 1..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6506-RA | 1..1285 | 1..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6506-RA | 25..1309 | 1..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17850484..17850683 | 1..200 | 100 | -> | Plus |
X | 17850745..17850851 | 201..308 | 98 | -> | Plus |
X | 17850913..17851889 | 309..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17850484..17850683 | 1..200 | 100 | -> | Plus |
X | 17850745..17850851 | 201..308 | 98 | -> | Plus |
X | 17850913..17851889 | 309..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17850484..17850683 | 1..200 | 100 | -> | Plus |
X | 17850745..17850851 | 201..308 | 98 | -> | Plus |
X | 17850913..17851889 | 309..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 17744517..17744716 | 1..200 | 100 | -> | Plus |
arm_X | 17744778..17744884 | 201..308 | 98 | -> | Plus |
arm_X | 17744946..17745922 | 309..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17859011..17859987 | 309..1285 | 100 | Plus | |
X | 17858582..17858781 | 1..200 | 100 | -> | Plus |
X | 17858843..17858949 | 201..308 | 98 | -> | Plus |
Translation from 57 to 1136
> LD38742.pep MQTEHWGSLPAEDDGGQLTPDKYVPTAAKKLKLDEIRQRGDPQPQEKHHK LELRSALVTQTIEVMKQTEVLQSLIETYSNKNGSSNYLLNPCLMIPEVDF PPENAAELVGSQKFQKPIWFTPTVDTAYSRGDPEAYPEIPSSACRQAMRK VMCGMLRLAGFTDCSESAVQLLTDATEEFLRSFIGEYRGYYDSQPRLQNS TVLQLVPLERAHFAQTGTSLTQVHNYYKHKVLARNRAEIAEFNSVLQEYD KLMKESQSSMQKQHNEFNGHDFLNILDNSATGSSQSIGGMAMGDMLQDLG GSTGSSGTVSSQQMLYGLLDGQISSNTSNMTGTSGNGSTGGNGNGNGATI SNFHATFET*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21109-PA | 359 | GF21109-PA | 1..359 | 1..359 | 1342 | 73.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19135-PA | 360 | GG19135-PA | 1..360 | 1..359 | 1650 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16819-PA | 367 | GH16819-PA | 4..360 | 1..336 | 1187 | 65.5 | Plus |
Dgri\GH12140-PA | 119 | GH12140-PA | 1..46 | 1..48 | 153 | 58.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Spt7-PA | 359 | CG6506-PA | 1..359 | 1..359 | 1869 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16196-PA | 362 | GI16196-PA | 1..354 | 1..334 | 1168 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14754-PA | 368 | GL14754-PA | 1..327 | 1..323 | 1253 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19647-PA | 368 | GA19647-PA | 1..327 | 1..323 | 1246 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22860-PA | 359 | GM22860-PA | 1..359 | 1..359 | 1915 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15888-PA | 397 | GJ15888-PA | 1..351 | 1..333 | 1248 | 68.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25763-PA | 367 | GK25763-PA | 8..367 | 1..359 | 1278 | 68.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17691-PA | 360 | GE17691-PA | 1..360 | 1..359 | 1662 | 95 | Plus |
Translation from 336 to 1136
> LD38742.hyp MIPEVDFPPENAAELVGSQKFQKPIWFTPTVDTAYSRGDPEAYPEIPSSA CRQAMRKVMCGMLRLAGFTDCSESAVQLLTDATEEFLRSFIGEYRGYYDS QPRLQNSTVLQLVPLERAHFAQTGTSLTQVHNYYKHKVLARNRAEIAEFN SVLQEYDKLMKESQSSMQKQHNEFNGHDFLNILDNSATGSSQSIGGMAMG DMLQDLGGSTGSSGTVSSQQMLYGLLDGQISSNTSNMTGTSGNGSTGGNG NGNGATISNFHATFET*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6506-PA | 359 | CG6506-PA | 94..359 | 1..266 | 1382 | 100 | Plus |