BDGP Sequence Production Resources |
Search the DGRC for LD38858
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 388 |
Well: | 58 |
Vector: | pOT2 |
Associated Gene/Transcript | CG15445-RA |
Protein status: | LD38858.pep: gold |
Preliminary Size: | 2255 |
Sequenced Size: | 2303 |
Gene | Date | Evidence |
---|---|---|
CG15445 | 2001-01-01 | Release 2 assignment |
CG15445 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15445 | 2003-02-24 | Blastp of sequenced clone |
CG15445 | 2008-04-29 | Release 5.5 accounting |
CG15445 | 2008-08-15 | Release 5.9 accounting |
CG15445 | 2008-12-18 | 5.12 accounting |
2303 bp (2303 high quality bases) assembled on 2003-02-24
GenBank Submission: BT004870
> LD38858.complete AATTGCGGTGATTCCACCAGGCAGAGCTTATCCCATACGAAGACGCAGCA CAGTTCACATTAAATAAATTTCCGTAAATAGTTCTTATTTGTCACCCGCC CAAAATTAAAGTCTACTCCACTGCACCCAACCCCGCGATTATCAACGACT GCGCATCGTTCTTTGTTGTTTCGTGTAGAAACACATGTGCAAGGAAGAAG AAGAACCAGAACATCACATCACTCGTAAATAGTAAATATCTAGAGCATGC CCGATCCTTTGTGACGCGTCAGTTTCAGCCAGTTCGCCACAATTTTTGCC AAGTCATCGTCGAAAATGTCACAAAACGACAACCTACTCATCCAGATCCG CGCCCTTCTCCAGTCCGATGGCGAGAAGCTGTGGGAGGAGCCCTACTACT CCGAAGATCTTGGTAGCATCGAGGGAGCACTAGAAAACCTGGCGCAGAAG TACTCCGGCATGTTGGGCATCGATATAGGTCGCTGCAAGTTCTTTTTGAC CGAGCTGCAGGAAAATGCTCTCCGTACGCTGGCCGCCCGACGTGAGTTCA GCACCACAGGAATTGCCACGTTGAAGGTTCGCCGCGTTGGCGAGCACAGC GGTGCCACAATGGTGGAAGTGAAGTGCAGCTTGGACATCGTGGGCTCCGA ACTCCAGGCATGCATAGCGAAGAAACTGGAAGTGCCGAATGCTGCGCACG TCAAGTGCATCGCTGCCGGCAAAGTGGTGTCCGCCAATGCCACTTTGGCC GACCAGCAGTTGAAGAACAACCAGCAGTTGATTGTCATTGTGGGCGATGG GGATAATTCTGGCGAAGCCCTGTACGAAAGGATCAATCGCATCAAGGCCG ATGTGGAGGCGGTGGTGTCCTCGAAGAATAACCTAATAGAGATGGAGGAT CAGAATGGCAGCCAAGTGTATTTGCCGCCTTCCGAGCATAAAGCCCTGCT CATGGGTTTGGGATTCTGTGAGAAGGCCCGTGCGGCCATGAATCGCAAGC ATTTTGAGGAGGCTCTGCTCCTGCTTTTGGAGGCCGACGAGCATTTTTCT ACCTGTGGCTCAAAGTTTCTAGAGTCCGTGGATAACTATGCTTTGCTGAA CCTCGACATAGTGTGGTGCTATTTTTGCCTGAAGAACGTTACCCAGCTCC CGGATGCTGAGCATCGCTTGGCCCGCTGCAGTCGCAATTTCGGCATCAGC TATGGCGACAATTTGGAGAGGCTGTACTCCTTGAAGGGCAAGGACTGTCC CGAGAGGGCTTTAATTATGCGGCTTAAGTTGCTCCAGGGCGTGATCTTCT TCCACCAGAATCTTCGCAATCAGGCATTTGAGTGCTTCGAAGCGGCTAAA ACTCTGCTAAATGAACTAAAGATCAACAACGACCAACTGGCTCTCCTGGT CGATATGGGCTTCGAGCCCTCCGAGGCTCGTATGGCCCTGCGCTCCTGCA AGGGCGGCACCGCCGTCGAACAGGCTGTTCAGTTTATTCACGAGCGTCGT CAGCAGCTCAAGAATGCACGCATGAAATATAAAGCGTCCGAGCGTGCTAT GGAGCGCCGCCTGAAGCGCTCCAATTCCAAAGATTGCACCTGGGTGAATC CCCGCAGTGTCTGCAGCCTTGCTGACATGGGATTCGAGAGCGGACTGGCC ACTATCGCCTTGCAGCGCTCTAATAATGATATCCTCCAAGCGGTGGAACT GCTGCAGACAGAATCGGACGAACTTACTGGTGCTTCGCCATGGTTTCCGG TCACCGTAGACACGACCAAACTGGCTCAGCTTCTGCAACTGGGATTCAAC GAGAACGACTCGCGCGTGGCCCTACAGAATGCATCAAATAACATGGAAGA GGCCATCGAGAGTCTGATGTGCGCCATAGAGAGCGAGGAGGAGCTGAAAG CGATTTTAAAGCACGTTGGGCGTTTGGCCGAAAATGGTGGGCAAAATCTT GACGGCCCCTCTACTTCGAACGCCTCCGGGCAGACGCAAGTTGCTTTGCC AGCGCCCATTATCGAAGCTGTTATCAATCATGCTCGCGTCGAGATTGAAA CGTACAAGGCCTACGAGCGCTTTAACTCCGACCTCAAACTGAGCGACCTG GAATACCTGGACTTGCCACTTATCCAGGAGGAGAAGATCCTGACTGAGTA TTTCAATATGCTGCAGCAGTAGCTTGTATTTGACTTGCCTTTTTTTATAT CTATACAAAAAAATATAGAAACCCGAAACCGGTTGTCAAGATAACTGTAA AAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15445-RA | 2462 | CG15445-RA | 105..2353 | 1..2250 | 11210 | 99.9 | Plus |
CG15445-RD | 2415 | CG15445-RD | 336..2306 | 279..2250 | 9820 | 99.9 | Plus |
CG15445-RC | 2151 | CG15445-RC | 20..1793 | 1..1774 | 8870 | 100 | Plus |
CG15445-RC | 2151 | CG15445-RC | 1792..2151 | 1890..2250 | 1765 | 99.7 | Plus |
CG15445-RD | 2415 | CG15445-RD | 105..335 | 1..231 | 1155 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20984017..20984821 | 890..1694 | 4025 | 100 | Plus |
chrX | 22417052 | chrX | 20984935..20985492 | 1692..2250 | 2745 | 99.8 | Plus |
chrX | 22417052 | chrX | 20983473..20983928 | 436..891 | 2280 | 100 | Plus |
chrX | 22417052 | chrX | 20982338..20982772 | 1..435 | 2175 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 21118860..21119664 | 890..1694 | 4025 | 100 | Plus |
X | 23542271 | X | 21119778..21120335 | 1692..2250 | 2745 | 99.8 | Plus |
X | 23542271 | X | 21118316..21118771 | 436..891 | 2280 | 100 | Plus |
X | 23542271 | X | 21117181..21117615 | 1..435 | 2175 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 21103952..21104756 | 890..1694 | 4025 | 100 | Plus |
X | 23527363 | X | 21104870..21105427 | 1692..2250 | 2755 | 99.8 | Plus |
X | 23527363 | X | 21103408..21103863 | 436..891 | 2280 | 100 | Plus |
X | 23527363 | X | 21102273..21102707 | 1..435 | 2175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20982338..20982772 | 1..435 | 100 | -> | Plus |
chrX | 20983473..20983928 | 436..891 | 100 | -> | Plus |
chrX | 20984019..20984819 | 892..1692 | 100 | -> | Plus |
chrX | 20984936..20985490 | 1693..2248 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15445-RD | 48..1941 | 279..2172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15445-RF | 1..1857 | 316..2172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15445-RD | 48..1941 | 279..2172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15445-RF | 1..1857 | 316..2172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15445-RA | 23..2269 | 1..2248 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15445-RA | 23..2269 | 1..2248 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15445-RA | 23..2269 | 1..2248 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15445-RA | 23..2269 | 1..2248 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15445-RA | 23..2269 | 1..2248 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21117181..21117615 | 1..435 | 100 | -> | Plus |
X | 21118316..21118771 | 436..891 | 100 | -> | Plus |
X | 21118862..21119662 | 892..1692 | 100 | -> | Plus |
X | 21119779..21120333 | 1693..2248 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21117181..21117615 | 1..435 | 100 | -> | Plus |
X | 21118316..21118771 | 436..891 | 100 | -> | Plus |
X | 21118862..21119662 | 892..1692 | 100 | -> | Plus |
X | 21119779..21120333 | 1693..2248 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21117181..21117615 | 1..435 | 100 | -> | Plus |
X | 21118316..21118771 | 436..891 | 100 | -> | Plus |
X | 21118862..21119662 | 892..1692 | 100 | -> | Plus |
X | 21119779..21120333 | 1693..2248 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20988208..20988642 | 1..435 | 100 | -> | Plus |
arm_X | 20989343..20989798 | 436..891 | 100 | -> | Plus |
arm_X | 20989889..20990689 | 892..1692 | 100 | -> | Plus |
arm_X | 20990806..20991360 | 1693..2248 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21102273..21102707 | 1..435 | 100 | -> | Plus |
X | 21103408..21103863 | 436..891 | 100 | -> | Plus |
X | 21103954..21104754 | 892..1692 | 100 | -> | Plus |
X | 21104871..21105425 | 1693..2248 | 99 | Plus |
Translation from 315 to 2171
> LD38858.hyp MSQNDNLLIQIRALLQSDGEKLWEEPYYSEDLGSIEGALENLAQKYSGML GIDIGRCKFFLTELQENALRTLAARREFSTTGIATLKVRRVGEHSGATMV EVKCSLDIVGSELQACIAKKLEVPNAAHVKCIAAGKVVSANATLADQQLK NNQQLIVIVGDGDNSGEALYERINRIKADVEAVVSSKNNLIEMEDQNGSQ VYLPPSEHKALLMGLGFCEKARAAMNRKHFEEALLLLLEADEHFSTCGSK FLESVDNYALLNLDIVWCYFCLKNVTQLPDAEHRLARCSRNFGISYGDNL ERLYSLKGKDCPERALIMRLKLLQGVIFFHQNLRNQAFECFEAAKTLLNE LKINNDQLALLVDMGFEPSEARMALRSCKGGTAVEQAVQFIHERRQQLKN ARMKYKASERAMERRLKRSNSKDCTWVNPRSVCSLADMGFESGLATIALQ RSNNDILQAVELLQTESDELTGASPWFPVTVDTTKLAQLLQLGFNENDSR VALQNASNNMEEAIESLMCAIESEEELKAILKHVGRLAENGGQNLDGPST SNASGQTQVALPAPIIEAVINHARVEIETYKAYERFNSDLKLSDLEYLDL PLIQEEKILTEYFNMLQQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15445-PH | 618 | CG15445-PH | 1..618 | 1..618 | 3138 | 100 | Plus |
CG15445-PG | 618 | CG15445-PG | 1..618 | 1..618 | 3138 | 100 | Plus |
CG15445-PF | 618 | CG15445-PF | 1..618 | 1..618 | 3138 | 100 | Plus |
CG15445-PE | 618 | CG15445-PE | 1..618 | 1..618 | 3138 | 100 | Plus |
CG15445-PA | 618 | CG15445-PA | 1..618 | 1..618 | 3138 | 100 | Plus |
Translation from 315 to 2171
> LD38858.pep MSQNDNLLIQIRALLQSDGEKLWEEPYYSEDLGSIEGALENLAQKYSGML GIDIGRCKFFLTELQENALRTLAARREFSTTGIATLKVRRVGEHSGATMV EVKCSLDIVGSELQACIAKKLEVPNAAHVKCIAAGKVVSANATLADQQLK NNQQLIVIVGDGDNSGEALYERINRIKADVEAVVSSKNNLIEMEDQNGSQ VYLPPSEHKALLMGLGFCEKARAAMNRKHFEEALLLLLEADEHFSTCGSK FLESVDNYALLNLDIVWCYFCLKNVTQLPDAEHRLARCSRNFGISYGDNL ERLYSLKGKDCPERALIMRLKLLQGVIFFHQNLRNQAFECFEAAKTLLNE LKINNDQLALLVDMGFEPSEARMALRSCKGGTAVEQAVQFIHERRQQLKN ARMKYKASERAMERRLKRSNSKDCTWVNPRSVCSLADMGFESGLATIALQ RSNNDILQAVELLQTESDELTGASPWFPVTVDTTKLAQLLQLGFNENDSR VALQNASNNMEEAIESLMCAIESEEELKAILKHVGRLAENGGQNLDGPST SNASGQTQVALPAPIIEAVINHARVEIETYKAYERFNSDLKLSDLEYLDL PLIQEEKILTEYFNMLQQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21714-PA | 612 | GF21714-PA | 1..612 | 1..618 | 1907 | 62.4 | Plus |
Dana\GF17272-PA | 615 | GF17272-PA | 1..615 | 1..618 | 1510 | 50.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19709-PA | 565 | GG19709-PA | 1..565 | 1..618 | 2153 | 69.1 | Plus |
Dere\GG11412-PA | 614 | GG11412-PA | 1..614 | 1..618 | 1425 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11840-PA | 610 | GH11840-PA | 1..610 | 1..618 | 1739 | 58.3 | Plus |
Dgri\GH18980-PA | 615 | GH18980-PA | 1..614 | 1..617 | 1504 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15445-PH | 618 | CG15445-PH | 1..618 | 1..618 | 3138 | 100 | Plus |
CG15445-PG | 618 | CG15445-PG | 1..618 | 1..618 | 3138 | 100 | Plus |
CG15445-PF | 618 | CG15445-PF | 1..618 | 1..618 | 3138 | 100 | Plus |
CG15445-PE | 618 | CG15445-PE | 1..618 | 1..618 | 3138 | 100 | Plus |
CG15445-PA | 618 | CG15445-PA | 1..618 | 1..618 | 3138 | 100 | Plus |
CG5111-PA | 614 | CG5111-PA | 1..613 | 1..617 | 1367 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14315-PA | 612 | GI14315-PA | 1..612 | 1..618 | 1686 | 59.3 | Plus |
Dmoj\GI22406-PA | 584 | GI22406-PA | 1..584 | 1..618 | 1421 | 47.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16401-PA | 611 | GL16401-PA | 1..611 | 1..618 | 1729 | 56.9 | Plus |
Dper\GL22144-PA | 597 | GL22144-PA | 1..597 | 1..618 | 1374 | 47.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13736-PA | 611 | GA13736-PA | 1..611 | 1..618 | 1714 | 56.6 | Plus |
Dpse\GA18667-PA | 597 | GA18667-PA | 1..597 | 1..618 | 1390 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23064-PA | 579 | GM23064-PA | 1..579 | 1..618 | 2654 | 82.7 | Plus |
Dsec\GM10250-PA | 614 | GM10250-PA | 1..613 | 1..617 | 1379 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17514-PA | 530 | GD17514-PA | 1..530 | 1..530 | 2471 | 88.9 | Plus |
Dsim\GD21223-PA | 614 | GD21223-PA | 1..613 | 1..617 | 1381 | 46.7 | Plus |
Dsim\GD24435-PA | 207 | GD24435-PA | 1..207 | 412..618 | 944 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19373-PA | 610 | GJ19373-PA | 1..610 | 1..618 | 1727 | 59.1 | Plus |
Dvir\GJ10966-PA | 632 | GJ10966-PA | 1..632 | 1..618 | 1553 | 51.6 | Plus |