BDGP Sequence Production Resources |
Search the DGRC for LD38919
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 389 |
Well: | 19 |
Vector: | pOT2 |
Associated Gene/Transcript | Ubqn-RA |
Protein status: | LD38919.pep: gold |
Preliminary Size: | 3246 |
Sequenced Size: | 3005 |
Gene | Date | Evidence |
---|---|---|
CG14224 | 2001-01-01 | Release 2 assignment |
CG14224 | 2002-06-19 | Blastp of sequenced clone |
CG14224 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14224 | 2008-04-29 | Release 5.5 accounting |
CG14224 | 2008-08-15 | Release 5.9 accounting |
Ubqn | 2008-12-18 | 5.12 accounting |
3005 bp (3005 high quality bases) assembled on 2002-06-19
GenBank Submission: AY128447
> LD38919.complete AGAAAGTGACGAATTACTTTTCATCAAATGGGAAATAATTTAGGGTGAAA ACACGTATATATTCGGAACACATTTAAATTACAGACGTGATAACATCTCG AAAGAACCAGCTACATCGGTGCAAATTAAGCTAAACGAGAACACCGCAAA TACACCATCGAAATGGCGGAAGGCGGCAGCAAGCGCATCAACGTGGTTGT AAAAACGCCAAAGGACAAGAAAACGGTCGAAGTTGACGAAGATTCTGGAA TAAAAGATTTCAAAATTCTGGTTGCACAAAAGTTCGAGGCGGAGCCCGAG CAGCTCGTGCTCATTTTTGCCGGCAAAATTATGAAGGACACGGACACCCT TCAGATGCACAACATCAAGGACAACCTGACGGTGCATCTGGTGATTAAGG CGCCGACGCGCAACAACGAGCAGCCGGCCCGACAGCCGGCTGACGTGCGC CAAACGCCCTTTGGCCTCAATCAATTCGGTGGCCTGGCCGGAATGGAGGC ACTTGGAGCCGGATCGAACACGTTCATGGATCTGCAGGCGCGCATGCAGA ACGAGCTGCTCAACAATGGCGACATGCTGCGCTCCCTGATGGACAACCCG ATGGTGCAGCAGATGATGAATAATCCGGATACCATGCGTCAGCTTATCAC GTCCAATCCGCAAATGCATGACCTGATGCAGCGCAACCCCGAGATCTCGC ATATGCTTAACAATCCGGACCTGCTGCGCCAGACGATGGAGCTGGCCCGC AATCCCTCGATGTTGCAGGAGCTGATGCGTTCGCACGACCGCGCCATGTC GAATCTGGAGTCGGTGCCGGGCGGCTATAGCGCCCTGCAGCGCATCTACC GCGATATTCAGGAGCCAATGATGAACGCGGCCACGGAATCCTTTGGTCGC AACCCCTTTGCCGGCCTGGTCGACGGCGGCGGTTCAGGAGCCGGCAACAA CCCGCAGCAGGGCACCGAGAACCGCAATCCCCTGCCGAATCCATGGGGCG GTGCCAATTCGGGAACCAATGGAACAGTCGGTGGCTCCGGCGCCGGCAAT CCGACGGGGGATCTGCCGCCGAACAATGTGCTCAACACGCCGGCCATGCG AAGCCTGCTCCAGCAGATGGCCGACAATCCAGCCATGATGCAGAACCTGC TGAACGCGCCCTACACGCGTTCCATGATGGAGTCCATGTCACAGGACCCG GACATGGCCGCGCGCTTGCTGAGCAGCAGTCCGCTCATGTCTAACAATCC CGCCCTGCAGGAGCAGGTGCGTCAGATGATGCCGCAGTTTATGGCCCAAA TGCAGAACCCCGAGGTGATGAACATGCTGACCAATCCGGATGCAATGAAC GCTATCCTGCAGATCCAGCAGGGCATGGAGCAGCTGCGCAGCGCGGCCCC AGGTCTCGTTGGCACCCTGGGCATTCCACCGCCACCACCGGGTGCCGGCA CCGGAACGAATCCAGCCAGCGGCGATGGGAGCGGGGGCAACAGCGGTGCC AGCACCAACAATGTTTCGCCAAGCAGCGGCCTCAACGCCGGCACCGGCAC TCCAAACCTGGCCCCGGGCGGTGGTCCCAACGCGCAGCTCTTCAACGACT TCATGATGCGCATGCTCAACGGGATGTCGAACAACGCGGACAACACACAG CCGCCGGAGGTGCGCTACCAGTCGCAGCTGGAGCAGCTGAACGCCATGGG CTTTGTCAACCGTGATGCCAACTTGCAGGCTCTGATCGCTACCTTCGGGG ACATCAATGCGGCGGTAGAGCGACTGCTGTCCCTCAACCAGTTGTCCTTG AGTTAACAAGGCTAAGCCATAGCCATAACCAAACTGTACACAACCTGTCT ATATATCTACGAACTACAACTACTATATATACCACTACGGCCCTGGAGAA CGCGAATGAGAACACGACTAGTTAGGAGGACAGGTCCTAAACCCAAACAC ACACCCTCCGCCAAAAAATTCCACGGTCAGCGCTGCTGATCGCTTGTTTC CCCATCAAGCCGGAAATGTCAGGAATCCATCATAGCCACATGCCAACATA CCAACACCCCCAAGACACAAAAAGATGGCTCCAAACGAGCATAGTTGCCT CGAGATCGGAGAGATACTAGATATAGGTGGGTGATATGAATGACGCCGGT GAGAATGTTAGATAGGGATCGCATACCAAAGTGTTAGCACTTTCGTAGTT GATATCAGATTTTTTTTTTTTTTAAATAATTTACATTTCGTGAGCTCGGA GAATCCTTTAAGCGGAAATGCGTTAGCCGAAAACCAACTTGAATATGCAT ACTTTGCTCACGTAATGCATAGTTTTGCACGCCCAACAACTTCAATCGAA ATACTTAACGCATTTCTTTATCGGAGAACTTCGTTAATTTTCAATAAAGT TAAGCGGGAATGTGCACTTTTGTCATTGATAATGTAATAACTATTTTGTC GCCAACAGATGCGAATTCCAGTTTTGTGTTTAAGAAAAAAGAATCGGTAC AGAGATCAGAGGCGTAGTATATATCCTGTGTTCTGGTCAGGCAGTTTAGT TTTAGTCGGGTGCTAGTGGGCGTGGGCTATAGCCGCAGTCCTTCTGACTC CCCCCCCCCTCCATTTCTCGCGATCGGAAAACGTTCTGGAAATTGCAAAC AACTGCAAACAGGACAAACGTACAGTAGATATCGGCTATATGCAAAGACG ACACTGTCTTGGGGGAATCCTAACATACGCGCGAGTATGCTGTAGTCAAT CAAAATGTTTATCGATTCGTTAATATAAGAGCAATCTCCAAGCGTTATTT ATCCCACATCCCGTTCAGAGGAATACAAATGTAAAAAGTTGTTGCACACA AGCGATTTGCATGCTAACGATATCTACTGTAAGTTAATGTGTGTATATAG GTATATATATATGTATATACATATATATATATATATCAAAATATTCCAAG GTGTTAACAAAAGACGTAAAACTATAAAACAAAAAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 19573230..19574700 | 259..1729 | 7355 | 100 | Plus |
chrX | 22417052 | chrX | 19574779..19576012 | 1729..2980 | 5855 | 98.4 | Plus |
chrX | 22417052 | chrX | 19572629..19572886 | 1..258 | 1290 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 19692538..19694008 | 259..1729 | 7355 | 100 | Plus |
X | 23527363 | X | 19694087..19695362 | 1729..3004 | 6380 | 100 | Plus |
X | 23527363 | X | 19691937..19692194 | 1..258 | 1290 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
transib3 | 2883 | transib3 TRANSIB3 2883bp | 1981..2074 | 82..174 | 124 | 66 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19572629..19572886 | 1..258 | 100 | -> | Plus |
chrX | 19573230..19574700 | 259..1729 | 100 | -> | Plus |
chrX | 19574780..19576007 | 1730..2975 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ubqn-RA | 1..1644 | 163..1806 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ubqn-RA | 1..1644 | 163..1806 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ubqn-RA | 1..1644 | 163..1806 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14224-RA | 1..1644 | 163..1806 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ubqn-RA | 1..1644 | 163..1806 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ubqn-RA | 92..3071 | 1..2980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ubqn-RA | 92..3071 | 1..2980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ubqn-RA | 32..3011 | 1..2980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14224-RA | 92..3071 | 1..2980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ubqn-RA | 32..3011 | 1..2980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19683839..19684096 | 1..258 | 100 | -> | Plus |
X | 19684440..19685910 | 259..1729 | 100 | -> | Plus |
X | 19685990..19687240 | 1730..2980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19683839..19684096 | 1..258 | 100 | -> | Plus |
X | 19684440..19685910 | 259..1729 | 100 | -> | Plus |
X | 19685990..19687240 | 1730..2980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19683839..19684096 | 1..258 | 100 | -> | Plus |
X | 19684440..19685910 | 259..1729 | 100 | -> | Plus |
X | 19685990..19687240 | 1730..2980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19577872..19578129 | 1..258 | 100 | -> | Plus |
arm_X | 19578473..19579943 | 259..1729 | 100 | -> | Plus |
arm_X | 19580023..19581273 | 1730..2980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19691937..19692194 | 1..258 | 100 | -> | Plus |
X | 19692538..19694008 | 259..1729 | 100 | -> | Plus |
X | 19694088..19695338 | 1730..2980 | 100 | Plus |
Translation from 162 to 1805
> LD38919.pep MAEGGSKRINVVVKTPKDKKTVEVDEDSGIKDFKILVAQKFEAEPEQLVL IFAGKIMKDTDTLQMHNIKDNLTVHLVIKAPTRNNEQPARQPADVRQTPF GLNQFGGLAGMEALGAGSNTFMDLQARMQNELLNNGDMLRSLMDNPMVQQ MMNNPDTMRQLITSNPQMHDLMQRNPEISHMLNNPDLLRQTMELARNPSM LQELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNAATESFGRNPFA GLVDGGGSGAGNNPQQGTENRNPLPNPWGGANSGTNGTVGGSGAGNPTGD LPPNNVLNTPAMRSLLQQMADNPAMMQNLLNAPYTRSMMESMSQDPDMAA RLLSSSPLMSNNPALQEQVRQMMPQFMAQMQNPEVMNMLTNPDAMNAILQ IQQGMEQLRSAAPGLVGTLGIPPPPPGAGTGTNPASGDGSGGNSGASTNN VSPSSGLNAGTGTPNLAPGGGPNAQLFNDFMMRMLNGMSNNADNTQPPEV RYQSQLEQLNAMGFVNRDANLQALIATFGDINAAVERLLSLNQLSLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20422-PA | 554 | GF20422-PA | 1..544 | 1..537 | 2419 | 88.3 | Plus |
Dana\GF18215-PA | 398 | GF18215-PA | 7..235 | 9..278 | 256 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19246-PA | 552 | GG19246-PA | 1..542 | 1..537 | 2398 | 95.2 | Plus |
Dere\GG12406-PA | 345 | GG12406-PA | 7..232 | 9..278 | 249 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12490-PA | 551 | GH12490-PA | 1..541 | 1..537 | 2271 | 86.4 | Plus |
Dgri\GH19051-PA | 333 | GH19051-PA | 2..234 | 5..289 | 197 | 22.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ubqn-PB | 547 | CG14224-PB | 1..547 | 1..547 | 2828 | 100 | Plus |
Ubqn-PA | 547 | CG14224-PA | 1..547 | 1..547 | 2828 | 100 | Plus |
CG31528-PA | 344 | CG31528-PA | 7..232 | 9..278 | 273 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11108-PA | 557 | GI11108-PA | 1..547 | 1..537 | 2319 | 85.7 | Plus |
Dmoj\GI24345-PA | 409 | GI24345-PA | 2..243 | 5..278 | 245 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18264-PA | 558 | GL18264-PA | 1..558 | 1..547 | 2326 | 87 | Plus |
Dper\GL21467-PA | 308 | GL21467-PA | 7..243 | 9..286 | 205 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12838-PA | 558 | GA12838-PA | 1..558 | 1..547 | 2322 | 87 | Plus |
Dpse\GA16302-PA | 308 | GA16302-PA | 7..243 | 9..286 | 177 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22982-PA | 546 | GM22982-PA | 1..546 | 1..547 | 2776 | 98.5 | Plus |
Dsec\GM10755-PA | 344 | GM10755-PA | 7..232 | 9..278 | 273 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15764-PA | 183 | GD15764-PA | 1..183 | 365..547 | 908 | 98.4 | Plus |
Dsim\GD19730-PA | 344 | GD19730-PA | 7..232 | 9..278 | 276 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15961-PA | 555 | GJ15961-PA | 1..545 | 1..537 | 2254 | 86.4 | Plus |
Dvir\GJ10430-PA | 392 | GJ10430-PA | 3..243 | 6..278 | 232 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25071-PA | 572 | GK25071-PA | 1..562 | 1..537 | 2294 | 83.6 | Plus |
Dwil\GK13535-PA | 373 | GK13535-PA | 5..230 | 7..278 | 267 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15866-PA | 552 | GE15866-PA | 1..542 | 1..537 | 2442 | 94.3 | Plus |
Translation from 162 to 1805
> LD38919.hyp MAEGGSKRINVVVKTPKDKKTVEVDEDSGIKDFKILVAQKFEAEPEQLVL IFAGKIMKDTDTLQMHNIKDNLTVHLVIKAPTRNNEQPARQPADVRQTPF GLNQFGGLAGMEALGAGSNTFMDLQARMQNELLNNGDMLRSLMDNPMVQQ MMNNPDTMRQLITSNPQMHDLMQRNPEISHMLNNPDLLRQTMELARNPSM LQELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNAATESFGRNPFA GLVDGGGSGAGNNPQQGTENRNPLPNPWGGANSGTNGTVGGSGAGNPTGD LPPNNVLNTPAMRSLLQQMADNPAMMQNLLNAPYTRSMMESMSQDPDMAA RLLSSSPLMSNNPALQEQVRQMMPQFMAQMQNPEVMNMLTNPDAMNAILQ IQQGMEQLRSAAPGLVGTLGIPPPPPGAGTGTNPASGDGSGGNSGASTNN VSPSSGLNAGTGTPNLAPGGGPNAQLFNDFMMRMLNGMSNNADNTQPPEV RYQSQLEQLNAMGFVNRDANLQALIATFGDINAAVERLLSLNQLSLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ubqn-PB | 547 | CG14224-PB | 1..547 | 1..547 | 2828 | 100 | Plus |
Ubqn-PA | 547 | CG14224-PA | 1..547 | 1..547 | 2828 | 100 | Plus |
CG31528-PA | 344 | CG31528-PA | 7..232 | 9..278 | 273 | 27.3 | Plus |