BDGP Sequence Production Resources |
Search the DGRC for LD39025
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 390 |
Well: | 25 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8483-RA |
Protein status: | LD39025.pep: gold |
Preliminary Size: | 2153 |
Sequenced Size: | 1890 |
Gene | Date | Evidence |
---|---|---|
CG8483 | 2001-01-01 | Release 2 assignment |
CG8483 | 2001-07-04 | Blastp of sequenced clone |
CG8483 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8483 | 2008-04-29 | Release 5.5 accounting |
CG8483 | 2008-08-15 | Release 5.9 accounting |
CG8483 | 2008-12-18 | 5.12 accounting |
1890 bp (1890 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051901
> LD39025.complete ACGCCTTCAAGTCTAGCTGCACGTACACGAGAGTGGAGTTGGAGTCGTCG GCTTTTTTTCGTGGCGCTCTTTTTTTCGGTTTTCCACATTTCATCCACCA CGCCCACCGTTCAAAATTGTGATACAAAAAATCCTAGCAAAATTGCAAAT CTATAGTGTATGGAATACCAGATATAACTCTGTCATTTATGAAAAGGTTA TATTTGAAAAATTAACAAAGTGCTTAAATCAATAAAAAAAAAAGAAGAAA TCAACGTGTTGTTTAAAACCCAATTTTATATAACCAAAATGATGCAGCCA AGTGCGGTATTACTAACCACAATTATGATCATCTCCTGCGAAGTGGCATT CGCCTGCAATGGAAAGATAATTGCATCGGGCATCACGGCGGAAGAGAGAT CAATCATCTTGCAGGAGCACAATCGCCTCCGGCAGATCGTGGCCACGGGT CGCTATCCAGGCCAGCCGGGTGCCGAGAATATGCGGGAGATCGTCTGGGA CGATGAGCTGGCCGCCAGAGCTCAGAAATGGGCTGACAACTGCCAGTTCC GTCACGATCCGCACCGTACAATAAATCGCTTTACGATGGGCCAGAATCTG GCCATCATCTGGAGTACGGCGCCTTTGGATGCCGATGACGGTGATTTCCC CTCTCGCATCCAGAGTTGGTTTAACGAGGTGCAGAAGTACTCCTTCGGGG ACGCCTGGTCCCCCAAAACTGGACACTATTCCCAACTGGTTTGGGGTGAG ACCAGCTTGGTGGGCTGTGGATATGCGGAGTACAAGGATACCAGCAAGTA CAACAAGCTCTACGTCTGCAATTATGGGCCTGGTGGCAATGTGGTGGGCT ACAATCCCTATGAGGTTGGAAAGCCATCGTGCTCCACATACGGCATGAAG CCTTCGTCCCGCTACCAAGGACTCTGCGCCGCTCCCGGATCCTCGCCAGC GGCCAACAGCGTTTACGGAGCAAACACAATTGAAACGTATGAGTACGGCT ACAACAGCAGCCCTTCCAGTCAAACCGCCAATAACAATCCGCCGACTAAC AACATTAACAAGAGCCAGTTCAGCTATAACCAACCAAGACCCAAGCCCGT CCAAACCATCAATCCAAATCCCTCCCCATTCAACCCACAGGCAGCGGTAC CATCAGCGTCGACCTTCGGCGGCAGTTCGTTTGGCAGCGCCTCGAGGGGC GGCAGCCACGCCTACACCACGGACCCATCGCAGTCGGCAGGCCGCTATAA GCACAAGCTCGAGGCGTATCGGCCAAGTGCGGCCGAGTTCGAGAAGTCCG TACACAAGCATACCATACTACGCACCTATATAGAGCAGAATCAACAGAGG CAGGATCAGCAGCAGCAGCAACAACAGAAGGAACAGGATCAGCAGCAGCA GCAGCCAGAGCCCTCGAGCACCAAGAAACCCAGTCGTGGATGGAGCCTTC TAACCTGGCGTGGTTGAGCTTTAAATCTTGCCAATCCATTTGCCAATCTA AAATGCCGCTCAATGTATTAGGCCATTAATAGCTACTATGTAGTGCCATT AGCCAACCACCAGGATCCATCGTCATCTCTAACACCTTCTGTCCATCGCC GTGAAACCCCTAGCAAATCCTATTTAAATACCCCAACAATTTGCCATATG AGCTGAAGTAGTTTCACTTCTTTGGAATTCCGGCTTGTTGGTGCCAGAAC ATAGAAGAAGTGCTGGCGGCGGACGATTCATGCCACAGACGAATATTTGT ATCAAATGTTTGCCACCCACCAAAACTGTCATCCTGTTAAAACCAACCAA TCGGCATTCAACATCGATCAGCTAGTTGTAGTATTGTGTTTAATAAAACA AGAATATTGATTTGTAAATTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8483-RA | 1897 | CG8483-RA | 23..1893 | 1..1872 | 9320 | 99.9 | Plus |
CG8483.a | 1727 | CG8483.a | 1..992 | 1..993 | 4925 | 99.8 | Plus |
CG8483.b | 1743 | CG8483.b | 23..1008 | 1..987 | 4895 | 99.8 | Plus |
CG8483.a | 1727 | CG8483.a | 992..1723 | 1141..1872 | 3660 | 100 | Plus |
CG8483.b | 1743 | CG8483.b | 1008..1739 | 1141..1872 | 3660 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 9033877..9034914 | 1870..833 | 5190 | 100 | Minus |
chr3R | 27901430 | chr3R | 9039224..9039597 | 373..1 | 1775 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 9035194..9035452 | 833..575 | 1295 | 100 | Minus |
chr3R | 27901430 | chr3R | 9036020..9036221 | 574..373 | 1010 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 13208752..13209791 | 1872..833 | 5200 | 100 | Minus |
3R | 32079331 | 3R | 13214094..13214465 | 373..1 | 1815 | 99.7 | Minus |
3R | 32079331 | 3R | 13210071..13210329 | 833..575 | 1295 | 100 | Minus |
3R | 32079331 | 3R | 13210897..13211098 | 574..373 | 1010 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 12949583..12950622 | 1872..833 | 5200 | 100 | Minus |
3R | 31820162 | 3R | 12954925..12955296 | 373..1 | 1825 | 99.7 | Minus |
3R | 31820162 | 3R | 12950902..12951160 | 833..575 | 1295 | 100 | Minus |
3R | 31820162 | 3R | 12951728..12951929 | 574..373 | 1010 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9033877..9034913 | 834..1870 | 95 | <- | Minus |
chr3R | 9035194..9035452 | 575..833 | 100 | <- | Minus |
chr3R | 9036020..9036220 | 374..574 | 100 | <- | Minus |
chr3R | 9039224..9039597 | 1..373 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8483-RA | 1..1179 | 289..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8483-RA | 1..1179 | 289..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8483-RA | 1..1179 | 289..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8483-RA | 1..1179 | 289..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8483-RA | 1..1179 | 289..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8483-RA | 1..1869 | 1..1870 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8483-RA | 1..1869 | 1..1870 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8483-RA | 1..1869 | 1..1870 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8483-RA | 1..1869 | 1..1870 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8483-RA | 1..1869 | 1..1870 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13208754..13209790 | 834..1870 | 100 | <- | Minus |
3R | 13210071..13210329 | 575..833 | 100 | <- | Minus |
3R | 13210897..13211097 | 374..574 | 100 | <- | Minus |
3R | 13214094..13214465 | 1..373 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13208754..13209790 | 834..1870 | 100 | <- | Minus |
3R | 13210071..13210329 | 575..833 | 100 | <- | Minus |
3R | 13210897..13211097 | 374..574 | 100 | <- | Minus |
3R | 13214094..13214465 | 1..373 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13208754..13209790 | 834..1870 | 100 | <- | Minus |
3R | 13210071..13210329 | 575..833 | 100 | <- | Minus |
3R | 13210897..13211097 | 374..574 | 100 | <- | Minus |
3R | 13214094..13214465 | 1..373 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9034476..9035512 | 834..1870 | 100 | <- | Minus |
arm_3R | 9035793..9036051 | 575..833 | 100 | <- | Minus |
arm_3R | 9036619..9036819 | 374..574 | 100 | <- | Minus |
arm_3R | 9039816..9040187 | 1..373 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12951728..12951928 | 374..574 | 100 | <- | Minus |
3R | 12954925..12955296 | 1..373 | 99 | Minus | |
3R | 12949585..12950621 | 834..1870 | 100 | <- | Minus |
3R | 12950902..12951160 | 575..833 | 100 | <- | Minus |
Translation from 288 to 1466
> LD39025.pep MMQPSAVLLTTIMIISCEVAFACNGKIIASGITAEERSIILQEHNRLRQI VATGRYPGQPGAENMREIVWDDELAARAQKWADNCQFRHDPHRTINRFTM GQNLAIIWSTAPLDADDGDFPSRIQSWFNEVQKYSFGDAWSPKTGHYSQL VWGETSLVGCGYAEYKDTSKYNKLYVCNYGPGGNVVGYNPYEVGKPSCST YGMKPSSRYQGLCAAPGSSPAANSVYGANTIETYEYGYNSSPSSQTANNN PPTNNINKSQFSYNQPRPKPVQTINPNPSPFNPQAAVPSASTFGGSSFGS ASRGGSHAYTTDPSQSAGRYKHKLEAYRPSAAEFEKSVHKHTILRTYIEQ NQQRQDQQQQQQQKEQDQQQQQPEPSSTKKPSRGWSLLTWRG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17401-PA | 396 | GF17401-PA | 1..394 | 1..391 | 1734 | 85.2 | Plus |
Dana\GF22388-PA | 311 | GF22388-PA | 94..284 | 32..213 | 195 | 28.1 | Plus |
Dana\GF20496-PA | 256 | GF20496-PA | 53..253 | 23..229 | 188 | 28.2 | Plus |
Dana\GF12099-PA | 263 | GF12099-PA | 70..254 | 40..214 | 163 | 29.6 | Plus |
Dana\GF19647-PA | 218 | GF19647-PA | 15..207 | 32..215 | 162 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17074-PA | 396 | GG17074-PA | 1..396 | 1..392 | 1743 | 93.2 | Plus |
Dere\GG18928-PA | 253 | GG18928-PA | 62..241 | 39..214 | 204 | 33.2 | Plus |
Dere\GG19461-PA | 308 | GG19461-PA | 91..281 | 32..213 | 204 | 28.6 | Plus |
Dere\GG19449-PA | 256 | GG19449-PA | 54..245 | 32..215 | 165 | 29.4 | Plus |
Dere\GG20780-PA | 261 | GG20780-PA | 61..252 | 33..214 | 165 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19187-PA | 391 | GH19187-PA | 1..391 | 2..392 | 1421 | 72.3 | Plus |
Dgri\GH24944-PA | 305 | GH24944-PA | 89..278 | 32..213 | 228 | 30.7 | Plus |
Dgri\GH12214-PA | 256 | GH12214-PA | 54..245 | 32..215 | 190 | 32 | Plus |
Dgri\GH12878-PA | 260 | GH12878-PA | 50..249 | 18..215 | 188 | 31.1 | Plus |
Dgri\GH21186-PA | 270 | GH21186-PA | 67..256 | 36..215 | 180 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8483-PA | 392 | CG8483-PA | 1..392 | 1..392 | 2118 | 100 | Plus |
CG9400-PA | 308 | CG9400-PA | 81..281 | 22..213 | 192 | 27.7 | Plus |
CG32679-PA | 254 | CG32679-PA | 63..250 | 39..229 | 190 | 32.2 | Plus |
Ag5r-PC | 256 | CG9538-PC | 42..256 | 20..226 | 164 | 27.2 | Plus |
Ag5r-PB | 256 | CG9538-PB | 42..256 | 20..226 | 164 | 27.2 | Plus |
Ag5r-PA | 256 | CG9538-PA | 42..256 | 20..226 | 164 | 27.2 | Plus |
CG17974-PA | 259 | CG17974-PA | 60..250 | 34..214 | 161 | 28.4 | Plus |
CG9822-PA | 263 | CG9822-PA | 64..251 | 37..214 | 153 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24221-PA | 413 | GI24221-PA | 1..413 | 1..392 | 1362 | 66.5 | Plus |
Dmoj\GI15747-PA | 256 | GI15747-PA | 54..244 | 32..214 | 201 | 33.3 | Plus |
Dmoj\GI15745-PA | 257 | GI15745-PA | 54..244 | 32..214 | 179 | 30.6 | Plus |
Dmoj\GI20472-PA | 267 | GI20472-PA | 67..255 | 36..214 | 179 | 31.1 | Plus |
Dmoj\GI15744-PA | 256 | GI15744-PA | 59..248 | 32..213 | 167 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23137-PA | 289 | GL23137-PA | 1..286 | 1..279 | 1228 | 80.6 | Plus |
Dper\GL22646-PA | 302 | GL22646-PA | 81..275 | 26..213 | 198 | 28.8 | Plus |
Dper\GL11847-PA | 263 | GL11847-PA | 61..250 | 36..215 | 173 | 31.6 | Plus |
Dper\GL10419-PA | 289 | GL10419-PA | 64..268 | 33..217 | 170 | 27.7 | Plus |
Dper\GL20410-PA | 254 | GL20410-PA | 44..244 | 22..214 | 169 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21107-PA | 416 | GA21107-PA | 1..416 | 1..392 | 1542 | 76.3 | Plus |
Dpse\GA23354-PA | 263 | GA23354-PA | 72..252 | 39..215 | 207 | 34.4 | Plus |
Dpse\GA21762-PA | 301 | GA21762-PA | 80..274 | 26..213 | 198 | 28.8 | Plus |
Dpse\GA22059-PA | 263 | GA22059-PA | 61..250 | 36..215 | 173 | 31.6 | Plus |
Dpse\GA14749-PA | 261 | GA14749-PA | 61..252 | 33..214 | 171 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25958-PA | 394 | GM25958-PA | 1..394 | 1..392 | 2067 | 98 | Plus |
Dsec\GM17559-PA | 308 | GM17559-PA | 91..303 | 32..232 | 200 | 28 | Plus |
Dsec\GM11319-PA | 237 | GM11319-PA | 46..225 | 39..214 | 198 | 33.2 | Plus |
Dsec\GM15725-PA | 258 | GM15725-PA | 58..249 | 33..214 | 159 | 28.3 | Plus |
Dsec\GM12039-PA | 256 | GM12039-PA | 54..245 | 32..215 | 154 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20518-PA | 394 | GD20518-PA | 1..394 | 1..392 | 2084 | 98.5 | Plus |
Dsim\GD16039-PA | 254 | GD16039-PA | 63..243 | 39..215 | 202 | 33 | Plus |
Dsim\GD15853-PA | 308 | GD15853-PA | 91..303 | 32..232 | 200 | 28 | Plus |
Dsim\GD25202-PA | 258 | GD25202-PA | 58..249 | 33..214 | 159 | 28.3 | Plus |
Dsim\GD25203-PA | 263 | GD25203-PA | 64..251 | 37..214 | 152 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10792-PA | 402 | GJ10792-PA | 16..402 | 15..392 | 1372 | 70.8 | Plus |
Dvir\GJ22140-PA | 283 | GJ22140-PA | 65..265 | 37..217 | 195 | 30 | Plus |
Dvir\GJ18491-PA | 324 | GJ18491-PA | 133..321 | 39..240 | 194 | 30.2 | Plus |
Dvir\GJ18606-PA | 256 | GJ18606-PA | 54..255 | 32..232 | 183 | 31.3 | Plus |
Dvir\GJ22322-PA | 262 | GJ22322-PA | 62..250 | 36..214 | 172 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22774-PA | 380 | GK22774-PA | 1..380 | 1..392 | 1402 | 73.9 | Plus |
Dwil\GK10315-PA | 296 | GK10315-PA | 82..291 | 32..232 | 201 | 26.1 | Plus |
Dwil\GK14741-PA | 240 | GK14741-PA | 38..233 | 28..214 | 200 | 28.3 | Plus |
Dwil\GK25699-PA | 253 | GK25699-PA | 35..241 | 18..214 | 186 | 31.2 | Plus |
Dwil\GK23199-PA | 287 | GK23199-PA | 65..279 | 37..232 | 170 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24462-PA | 392 | GE24462-PA | 1..392 | 1..392 | 1816 | 93.6 | Plus |
Dyak\GE16115-PA | 308 | GE16115-PA | 91..281 | 32..213 | 216 | 29.2 | Plus |
Dyak\GE15398-PA | 253 | GE15398-PA | 62..241 | 39..214 | 209 | 33.5 | Plus |
Dyak\Ag5r-PA | 256 | GE16102-PA | 54..245 | 32..215 | 167 | 31 | Plus |
Dyak\GE13718-PA | 262 | GE13718-PA | 62..253 | 33..214 | 160 | 28.9 | Plus |
Translation from 288 to 1466
> LD39025.hyp MMQPSAVLLTTIMIISCEVAFACNGKIIASGITAEERSIILQEHNRLRQI VATGRYPGQPGAENMREIVWDDELAARAQKWADNCQFRHDPHRTINRFTM GQNLAIIWSTAPLDADDGDFPSRIQSWFNEVQKYSFGDAWSPKTGHYSQL VWGETSLVGCGYAEYKDTSKYNKLYVCNYGPGGNVVGYNPYEVGKPSCST YGMKPSSRYQGLCAAPGSSPAANSVYGANTIETYEYGYNSSPSSQTANNN PPTNNINKSQFSYNQPRPKPVQTINPNPSPFNPQAAVPSASTFGGSSFGS ASRGGSHAYTTDPSQSAGRYKHKLEAYRPSAAEFEKSVHKHTILRTYIEQ NQQRQDQQQQQQQKEQDQQQQQPEPSSTKKPSRGWSLLTWRG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8483-PA | 392 | CG8483-PA | 1..392 | 1..392 | 2118 | 100 | Plus |
CG9400-PA | 308 | CG9400-PA | 81..281 | 22..213 | 192 | 27.7 | Plus |
CG32679-PA | 254 | CG32679-PA | 63..250 | 39..229 | 190 | 32.2 | Plus |
Ag5r-PC | 256 | CG9538-PC | 42..256 | 20..226 | 164 | 27.2 | Plus |
Ag5r-PB | 256 | CG9538-PB | 42..256 | 20..226 | 164 | 27.2 | Plus |