Clone LD39062 Report

Search the DGRC for LD39062

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:390
Well:62
Vector:pOT2
Associated Gene/TranscriptCG6678-RA
Protein status:LD39062.pep: gold
Preliminary Size:3228
Sequenced Size:2849

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6678 2001-09-19 Blastp of sequenced clone
CG6678 2003-01-01 Sim4 clustering to Release 3
CG6678 2008-04-29 Release 5.5 accounting
CG6678 2008-08-15 Release 5.9 accounting
CG6678 2008-12-18 5.12 accounting

Clone Sequence Records

LD39062.complete Sequence

2849 bp (2849 high quality bases) assembled on 2001-09-19

GenBank Submission: AY060419

> LD39062.complete
CGGGTTTCCATGGCGACGATCGCAAAATGAAAACAAATCGTGCAATTACG
GAACAACAAGGCACTTAATTAGCTGTTACGGAACCGGGAGACAACCTACC
ATCGTATAATTAACGCGAGAATAACAGCCAGGAGGCGGTGCGATCTCCGA
CCACTATATCCGTATCTGTATCCCCCCGATTCGGCAATCTGCTCTGGCCG
CCCAAGACGGTGTCTTCTGGTGGTCAACTCAGGAAAAGTCGGATAACTTG
AGAATTGGATCAACTTCAACCACCAAACACAACATCACTGGCTCGTCGCT
GCACAACTACTGAAAACAAAATTCGCTCAACGCTCTAACAAATTCCGACA
GCAACAACAACAGCGCCAACGGTCGCCGAGCAACCGCTGCAAAGGATTGT
TAGACGGGGGACGTGGTGGGGGTGCGGGTCGAGCGGTATTCGAATTGGAA
CGGGAACGGGAAGAAGATGCCGCTGCTATTTACGGGCTTCAACGCATTTG
GCCAGCATGAATGTGTAAGCGGCGACGTCGACTGCGCAGCCGGCTTCAGC
GAATTAAATGCGCCAGTCTCGACTCAGAACCAGTGCACGATTTCGATCGG
CTGGCGGTATGCGGCCCTCGCTTTTGGCCGGAAGTTGTGCCTGCGTGGGC
TCTTGGATGATGGCCCAAATGAGTGCGTGACCCTGGAAGCAACGGGGAAC
ATAAGGGCCCTTGCCGCTGCCGATTCCCACTGCCTGGTGCTACTCCAAAG
CGGTCAGCTTTACAGGGTGCAACCAAAACTGCAAGCGGAACTGGTGGCTG
TTAGACTAGAAGCTGCTCCCAGATCCAATTCGGGTACAAAGCGCTCTATC
TTTGGGGCTGCCAAGGCGCCTTCGTCGCCGATCATAGAGCATATTGCATG
TGGATCGCACATAAACGTAGCGATAAGTTCGGAAAACTGTGTCTACAGCA
TTCCCAGCTGCCTGCATCAGTTTTCCGAGCGCCAATTTCGGGTGAAGCAG
CTCCAATGCGGCCATGAACATGCCGTGCTCCTCAATGCCAATGGCGACGT
GTTCACCTGGGGAAATGGACTACGCGGACAGTTGGGTCTGGCGGAACTGA
GAGTGGAGGAGACGCCTCAATTGCTGGAGGCGCTGGCGGGGATCAAGATA
ACTCAAATTGCTGCCGGTGGTTGGCACAGTGCGGCCATATCCGCCTTTGG
AGACCTCTACACCTGGGGCCTCAACTGCAGCGGTCAGCTGGGATTGCGTG
TGATGAAACCCGGTGGCGTCCTCAAAGAGCCCACTGTATTTCCGCTGCCC
CAGTTGCAAGATCTGCCCGAATGTGCCTGCTCCCAAAGCGGGGAGAGCAA
CGATGATTGCGCACCGCTGAGGGTGTTTGCTGGATCTCGTCACACTCTGC
TGATCCGCCGATGCGGGCGGCTATGGGTCAGTGGTTGGTGCAAGCACGGT
CAACTTGGCAGGCAGCTCCAAGACCTGTCCTATGTGGATGCTTTTCAGGC
CCTGGAAGGTATCACGATGAACCCTACTGTGGATGATGTTCTCTGTGGGC
CATGGTCAACGCTGCTCCATTTGAAGTGTACGGCTTAGCAGATCTTTGGC
TCAATGGATGCTCATCGCGGCCTGGCTAAAGCGTTGTAGCTGTACACCGG
CTGATCCTCATCCTCAGCCTCAACTGCAGCCTCATCCCCATATTGCCGTG
GCCAAGACAAATGCAGACGATGGCTCTTTAGCCGTATCTTTCACTTTGAT
TGTGGCTGGGAGTCTGCGACTGAGACTGTGGCTCGTGTGGGGCACGTGAA
GCTTTAGGATGGGTGGTGCTGTGGTGCCGGCAGTCGTTAGCCTTGTCTTA
TTGCCCGTGTTGGCCAAACACTTGGCTACTGGTTGTTTACATATGTACGG
GAACGGGAATGGGTATTGGAAAGAGTACTGGTACGGGTATAACTCAATCA
GCCCGAAGAGGAGGAGCCATGGGACTCGATGTGTGTGTGGGTCAGGTGAC
CTGCAACAAATTAGCCTGGGAGTTATGAACCTCAGCAATGGAATGCGTGC
TGGTATCTGGTAAGAACGCACAAAACAAGATGGACTGGACTGGCCCACAA
CTATGGTCAAGTTCTAATGAAAACCTAATTACAAAATCAGCCAATACTCT
CAAGAGCCGCACATAATTAAGGCGCACACATGACTTGGCTTGGTTTTTCC
TCCTCCTCGCCCAATTGTCGCCGTCTCCAATTTCCAGTGCTCCCCCCTCC
TCTACCCATGCGATGAAAAACGCATTTAAAAGCCACATTAATGACGCGGA
CTCGATGCGACGACCACTTTGGTAAAATAGGAAATTGCTGCGTTCGGCTG
CTCTCCAGATTCTGGTCTATCTGTTTTCCTTTTTGTTTTTGTATCTTTTT
TTTTTGTTGTTCCCATCTGCAGATAGCGACACAAAAACGGTTGCCTCCGA
GCCAAAGTCGAGCTCGCTGCTGTGTTTGCGAGCGTTTTCAGCGCATTTTT
AGTTAATTTACCAGGAAAAACATTTGAAATTCTTAAAAAAGTCGCAACAA
GAAGTTGGCTACTCGCCTGGCGGCTGGAAAAAGTCACATCACAACGTTGT
CTATACAACGCCTTTCTGGCGTGCTCTTTCGTGAAGTTGGCTATAACAAC
TAGTCTTGAGATACACAATATTATTTTGGAGCAATATCTATTTATATTTA
AGAGCCACAGAAGAGATAACTACTCAATATGCTTTTTCCCATTTAAGATC
AAAACATTTGTATTTTATATTTCATAAATAAAATAAAAAGACAAAAGAGT
ATACAAATATAACAAATTATTTTAATAAATCAAAAAAAAAAAAAAAAAA

LD39062.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG6678-RA 2833 CG6678-RA 3..2833 1..2831 14155 100 Plus
dnd-RA 911 dnd-RA 1..213 311..99 1065 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 17729606..17730861 1570..2831 6035 99.1 Plus
chr3R 27901430 chr3R 17710755..17711306 1..551 2695 99.6 Plus
chr3R 27901430 chr3R 17711744..17712264 551..1071 2590 99.8 Plus
chr3R 27901430 chr3R 17712546..17712976 1146..1576 2125 99.5 Plus
chr3R 27901430 chr3R 17712412..17712487 1072..1147 350 97.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:33:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21905921..21907183 1570..2832 6300 99.9 Plus
3R 32079331 3R 21887041..21887591 1..551 2755 100 Plus
3R 32079331 3R 21888034..21888554 551..1071 2605 100 Plus
3R 32079331 3R 21888837..21889267 1146..1576 2155 100 Plus
3R 32079331 3R 21888703..21888778 1072..1147 380 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:40:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 21646752..21648014 1570..2832 6300 99.9 Plus
3R 31820162 3R 21627872..21628422 1..551 2755 100 Plus
3R 31820162 3R 21628865..21629385 551..1071 2605 100 Plus
3R 31820162 3R 21629668..21630098 1146..1576 2155 100 Plus
3R 31820162 3R 21629534..21629609 1072..1147 380 100 Plus
Blast to na_te.dros performed 2019-03-16 10:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2315..2374 332..391 120 71 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2385..2433 346..393 116 73.5 Plus

LD39062.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:59:21 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 17710755..17711306 1..551 99 -> Plus
chr3R 17711745..17712264 552..1071 99 -> Plus
chr3R 17712412..17712487 1072..1147 97 -> Plus
chr3R 17712548..17712976 1148..1576 99 -> Plus
chr3R 17729613..17730861 1577..2831 93   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:54:02 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
CG6678-RA 1..1122 467..1588 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:59:53 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
CG6678-RA 1..1122 467..1588 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:41:02 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
CG6678-RA 1..1122 467..1588 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:30:17 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
CG6678-RA 1..1122 467..1588 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:22:31 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
CG6678-RA 1..1122 467..1588 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:54:01 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
CG6678-RA 1..2831 1..2831 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:59:53 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
CG6678-RA 1..2831 1..2831 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:41:02 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
CG6678-RA 13..2843 1..2831 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:30:17 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
CG6678-RA 1..2831 1..2831 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:22:31 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
CG6678-RA 13..2843 1..2831 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:59:21 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21888839..21889267 1148..1576 100 -> Plus
3R 21887041..21887591 1..551 100 -> Plus
3R 21888035..21888554 552..1071 100 -> Plus
3R 21888703..21888778 1072..1147 100 -> Plus
3R 21905928..21907182 1577..2831 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:59:21 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21888839..21889267 1148..1576 100 -> Plus
3R 21887041..21887591 1..551 100 -> Plus
3R 21888035..21888554 552..1071 100 -> Plus
3R 21888703..21888778 1072..1147 100 -> Plus
3R 21905928..21907182 1577..2831 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:59:21 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21888839..21889267 1148..1576 100 -> Plus
3R 21887041..21887591 1..551 100 -> Plus
3R 21888035..21888554 552..1071 100 -> Plus
3R 21888703..21888778 1072..1147 100 -> Plus
3R 21905928..21907182 1577..2831 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:41:02 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17712763..17713313 1..551 100 -> Plus
arm_3R 17713757..17714276 552..1071 100 -> Plus
arm_3R 17714425..17714500 1072..1147 100 -> Plus
arm_3R 17714561..17714989 1148..1576 100 -> Plus
arm_3R 17731650..17732904 1577..2831 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:06:40 Download gff for LD39062.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21629670..21630098 1148..1576 100 -> Plus
3R 21627872..21628422 1..551 100 -> Plus
3R 21628866..21629385 552..1071 100 -> Plus
3R 21629534..21629609 1072..1147 100 -> Plus
3R 21646759..21648013 1577..2831 100   Plus

LD39062.pep Sequence

Translation from 466 to 1587

> LD39062.pep
MPLLFTGFNAFGQHECVSGDVDCAAGFSELNAPVSTQNQCTISIGWRYAA
LAFGRKLCLRGLLDDGPNECVTLEATGNIRALAAADSHCLVLLQSGQLYR
VQPKLQAELVAVRLEAAPRSNSGTKRSIFGAAKAPSSPIIEHIACGSHIN
VAISSENCVYSIPSCLHQFSERQFRVKQLQCGHEHAVLLNANGDVFTWGN
GLRGQLGLAELRVEETPQLLEALAGIKITQIAAGGWHSAAISAFGDLYTW
GLNCSGQLGLRVMKPGGVLKEPTVFPLPQLQDLPECACSQSGESNDDCAP
LRVFAGSRHTLLIRRCGRLWVSGWCKHGQLGRQLQDLSYVDAFQALEGIT
MNPTVDDVLCGPWSTLLHLKCTA*

LD39062.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:36:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18053-PA 375 GF18053-PA 4..371 3..367 1494 76.1 Plus
Dana\GF19414-PA 5087 GF19414-PA 3129..3246 143..259 189 38.5 Plus
Dana\GF24453-PA 1058 GF24453-PA 28..231 128..331 176 28.3 Plus
Dana\GF24453-PA 1058 GF24453-PA 141..341 75..264 163 29 Plus
Dana\GF19414-PA 5087 GF19414-PA 4297..4396 160..259 161 35 Plus
Dana\GF19414-PA 5087 GF19414-PA 4471..4554 176..259 159 41.7 Plus
Dana\GF19414-PA 5087 GF19414-PA 3215..3404 140..331 156 27.5 Plus
Dana\GF18668-PA 1989 GF18668-PA 1178..1270 166..259 152 37.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:36:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11092-PA 374 GG11092-PA 1..372 1..372 1861 93.3 Plus
Dere\GG19286-PA 4908 GG19286-PA 3002..3155 122..259 193 35.2 Plus
Dere\GG14780-PA 1058 GG14780-PA 28..231 128..331 179 28.2 Plus
Dere\GG19286-PA 4908 GG19286-PA 4118..4217 160..259 162 35 Plus
Dere\GG19286-PA 4908 GG19286-PA 4292..4375 176..259 160 41.7 Plus
Dere\GG19286-PA 4908 GG19286-PA 3124..3313 140..331 156 27.5 Plus
Dere\GG14780-PA 1058 GG14780-PA 248..341 172..264 153 41.5 Plus
Dere\GG11698-PA 1961 GG11698-PA 1166..1258 166..259 153 37.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:36:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20910-PA 375 GH20910-PA 4..373 3..369 1120 59.9 Plus
Dgri\GH17927-PA 4933 GH17927-PA 2994..3084 166..259 192 45.7 Plus
Dgri\GH15214-PA 1052 GH15214-PA 24..227 128..331 172 28.7 Plus
Dgri\GH17927-PA 4933 GH17927-PA 4143..4242 160..259 168 37 Plus
Dgri\GH17927-PA 4933 GH17927-PA 4317..4400 176..259 159 41.7 Plus
Dgri\GH10796-PA 491 GH10796-PA 111..269 165..342 158 25.1 Plus
Dgri\GH20866-PA 841 GH20866-PA 506..663 170..347 154 27.5 Plus
Dgri\GH15214-PA 1052 GH15214-PA 196..337 140..264 151 33.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG6678-PA 373 CG6678-PA 1..373 1..373 1983 100 Plus
HERC2-PC 4912 CG11734-PC 3069..3158 172..259 193 46.7 Plus
Herc4-PA 1058 CG9153-PA 42..231 140..331 179 26.8 Plus
Herc4-PB 1058 CG9153-PB 42..231 140..331 179 26.8 Plus
Herc4-PC 1062 CG9153-PC 93..236 172..331 174 30.4 Plus
Herc4-PA 1058 CG9153-PA 142..385 76..312 169 27.6 Plus
Herc4-PB 1058 CG9153-PB 142..385 76..312 169 27.6 Plus
Herc4-PC 1062 CG9153-PC 147..390 76..312 169 27.6 Plus
HERC2-PC 4912 CG11734-PC 4122..4221 160..259 167 35 Plus
HERC2-PC 4912 CG11734-PC 3127..3316 140..331 166 27.5 Plus
Herc4-PC 1062 CG9153-PC 42..181 176..331 165 32.7 Plus
HERC2-PC 4912 CG11734-PC 4296..4379 176..259 164 41.7 Plus
HERC2-PC 4912 CG11734-PC 3123..3264 172..331 156 24.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:36:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10720-PA 368 GI10720-PA 5..366 3..369 1112 58.9 Plus
Dmoj\GI16306-PA 5077 GI16306-PA 3080..3233 122..259 195 35.8 Plus
Dmoj\GI13052-PA 1053 GI13052-PA 21..227 125..331 186 28.3 Plus
Dmoj\GI16306-PA 5077 GI16306-PA 4287..4386 160..259 164 35 Plus
Dmoj\GI17306-PA 486 GI17306-PA 106..264 165..342 161 25.1 Plus
Dmoj\GI16306-PA 5077 GI16306-PA 4461..4544 176..259 156 40.5 Plus
Dmoj\GI16306-PA 5077 GI16306-PA 3202..3339 140..259 154 33.6 Plus
Dmoj\GI13052-PA 1053 GI13052-PA 137..337 75..264 154 28.1 Plus
Dmoj\GI22045-PA 1966 GI22045-PA 1173..1265 166..259 151 37.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:36:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23803-PA 428 GL23803-PA 4..411 3..367 1329 64.7 Plus
Dper\GL26839-PA 3840 GL26839-PA 1913..2004 165..259 187 43.2 Plus
Dper\GL16177-PA 1052 GL16177-PA 144..334 82..261 179 31.5 Plus
Dper\GL16177-PA 1052 GL16177-PA 34..227 135..331 178 29.4 Plus
Dper\GL16177-PA 1052 GL16177-PA 38..214 176..373 174 30.7 Plus
Dper\GL26839-PA 3840 GL26839-PA 3050..3149 160..259 163 35 Plus
Dper\GL26839-PA 3840 GL26839-PA 1970..2162 137..331 159 27.6 Plus
Dper\GL26839-PA 3840 GL26839-PA 3224..3307 176..259 153 40.5 Plus
Dper\GL13858-PA 867 GL13858-PA 442..693 55..270 152 28 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:36:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19773-PA 402 GA19773-PA 4..385 3..367 1371 69.4 Plus
Dpse\GA11166-PA 5072 GA11166-PA 3177..3267 166..259 187 43.6 Plus
Dpse\GA29094-PA 243 GA29094-PA 49..239 82..261 182 30.5 Plus
Dpse\GA28417-PA 1052 GA28417-PA 144..334 82..261 180 31.5 Plus
Dpse\GA28417-PA 1052 GA28417-PA 34..227 135..331 179 29.4 Plus
Dpse\GA28417-PA 1052 GA28417-PA 38..214 176..373 174 30.7 Plus
Dpse\GA29094-PA 243 GA29094-PA 40..237 170..331 168 30.7 Plus
Dpse\GA11166-PA 5072 GA11166-PA 4309..4408 160..259 162 35 Plus
Dpse\GA11166-PA 5072 GA11166-PA 4483..4566 176..259 159 41.7 Plus
Dpse\GA11166-PA 5072 GA11166-PA 3233..3373 137..259 153 32.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:36:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26385-PA 374 GM26385-PA 1..372 1..372 1874 94.6 Plus
Dsec\GM23027-PA 3806 GM23027-PA 2660..2813 122..259 193 35.2 Plus
Dsec\GM14399-PA 1058 GM14399-PA 28..231 128..331 175 27.4 Plus
Dsec\GM23028-PA 725 GM23028-PA 109..192 176..259 161 41.7 Plus
Dsec\GM14399-PA 1058 GM14399-PA 248..385 172..312 158 34.7 Plus
Dsec\GM23027-PA 3806 GM23027-PA 2782..2971 140..331 157 27.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:36:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20908-PA 374 GD20908-PA 1..372 1..372 1882 94.9 Plus
Dsim\GD13608-PA 1058 GD13608-PA 28..231 128..331 172 26.9 Plus
Dsim\GD13608-PA 1058 GD13608-PA 248..385 172..312 155 34.7 Plus
Dsim\GD21470-PA 1976 GD21470-PA 1180..1272 166..259 153 37.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:36:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23136-PA 371 GJ23136-PA 4..369 3..369 1181 62 Plus
Dvir\GJ15642-PA 5062 GJ15642-PA 3064..3217 122..259 196 35.8 Plus
Dvir\GJ12148-PA 1053 GJ12148-PA 24..227 128..331 168 27.4 Plus
Dvir\GJ15642-PA 5062 GJ15642-PA 4272..4371 160..259 166 36 Plus
Dvir\GJ15642-PA 5062 GJ15642-PA 4446..4529 176..259 159 41.7 Plus
Dvir\GJ15738-PA 487 GJ15738-PA 107..265 165..342 154 24.6 Plus
Dvir\GJ24098-PA 1962 GJ24098-PA 1182..1264 176..259 152 41.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:36:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14234-PA 387 GK14234-PA 8..372 3..367 1155 61.3 Plus
Dwil\GK20144-PA 4996 GK20144-PA 3109..3199 166..259 191 44.7 Plus
Dwil\GK22640-PA 1261 GK22640-PA 27..268 79..332 186 24.9 Plus
Dwil\GK20388-PA 1054 GK20388-PA 38..181 176..339 165 30.5 Plus
Dwil\GK20388-PA 1054 GK20388-PA 38..228 79..260 164 27.9 Plus
Dwil\GK20388-PA 1054 GK20388-PA 34..174 135..261 162 31 Plus
Dwil\GK20144-PA 4996 GK20144-PA 4219..4318 160..259 159 34 Plus
Dwil\GK20144-PA 4996 GK20144-PA 4393..4476 176..259 159 41.7 Plus
Dwil\GK22629-PA 1990 GK22629-PA 1194..1344 166..309 159 34.4 Plus
Dwil\GK20388-PA 1054 GK20388-PA 137..381 75..312 155 26.7 Plus
Dwil\GK20144-PA 4996 GK20144-PA 3168..3357 140..331 152 27.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:36:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10252-PA 374 GE10252-PA 1..372 1..372 1858 93.5 Plus
Dyak\GE17877-PA 2660 GE17877-PA 751..904 122..259 192 35.2 Plus
Dyak\GE21143-PA 1057 GE21143-PA 28..231 128..331 176 28.2 Plus
Dyak\GE17877-PA 2660 GE17877-PA 1870..1969 160..259 163 35 Plus
Dyak\GE17877-PA 2660 GE17877-PA 2044..2127 176..259 159 41.7 Plus
Dyak\GE17877-PA 2660 GE17877-PA 873..1062 140..331 158 27.5 Plus
Dyak\GE21143-PA 1057 GE21143-PA 248..341 172..264 153 41.5 Plus
Dyak\GE23888-PA 1974 GE23888-PA 1179..1271 166..259 153 37.9 Plus

LD39062.hyp Sequence

Translation from 466 to 1587

> LD39062.hyp
MPLLFTGFNAFGQHECVSGDVDCAAGFSELNAPVSTQNQCTISIGWRYAA
LAFGRKLCLRGLLDDGPNECVTLEATGNIRALAAADSHCLVLLQSGQLYR
VQPKLQAELVAVRLEAAPRSNSGTKRSIFGAAKAPSSPIIEHIACGSHIN
VAISSENCVYSIPSCLHQFSERQFRVKQLQCGHEHAVLLNANGDVFTWGN
GLRGQLGLAELRVEETPQLLEALAGIKITQIAAGGWHSAAISAFGDLYTW
GLNCSGQLGLRVMKPGGVLKEPTVFPLPQLQDLPECACSQSGESNDDCAP
LRVFAGSRHTLLIRRCGRLWVSGWCKHGQLGRQLQDLSYVDAFQALEGIT
MNPTVDDVLCGPWSTLLHLKCTA*

LD39062.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:36:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG6678-PA 373 CG6678-PA 1..373 1..373 1983 100 Plus
HERC2-PC 4912 CG11734-PC 3069..3158 172..259 193 46.7 Plus
CG9153-PA 1058 CG9153-PA 42..231 140..331 179 26.8 Plus
CG9153-PB 1058 CG9153-PB 42..231 140..331 179 26.8 Plus
CG9153-PC 1062 CG9153-PC 93..236 172..331 174 30.4 Plus
CG9153-PA 1058 CG9153-PA 142..385 76..312 169 27.6 Plus
CG9153-PB 1058 CG9153-PB 142..385 76..312 169 27.6 Plus
HERC2-PC 4912 CG11734-PC 4122..4221 160..259 167 35 Plus
HERC2-PC 4912 CG11734-PC 3127..3316 140..331 166 27.5 Plus
HERC2-PC 4912 CG11734-PC 4296..4379 176..259 164 41.7 Plus
HERC2-PC 4912 CG11734-PC 3123..3264 172..331 156 24.7 Plus