BDGP Sequence Production Resources |
Search the DGRC for LD39230
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 392 |
Well: | 30 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6179-RA |
Protein status: | LD39230.pep: gold |
Preliminary Size: | 1368 |
Sequenced Size: | 1252 |
Gene | Date | Evidence |
---|---|---|
CG6179 | 2008-04-29 | Release 5.5 accounting |
CG6179 | 2008-04-29 | Picked prior to 5.5 |
CG6179 | 2008-08-15 | Release 5.9 accounting |
CG6179 | 2008-12-18 | 5.12 accounting |
1252 bp assembled on 2007-09-25
GenBank Submission: BT030994
> LD39230.complete AAATAAACTATTTTAAGCAGTTTATTCAAATTTTTCGCTGCCAAATCCAG GAAACTCTATTGAAATGACTCGCCACGCACGTAACTGCACGGCCGGAGCC GTGTACACCTACAACGAGAAGAAGCGTGACGCGGCGGAGTCCGGCTACGG CACGAATGCCCAGCGCCTGGGCAAGGATTCGGTGAAATCCTTCGACTGCT GCTCCTTGACGCTGCAACCATGTCGCAGGCCAGTGATCACCAAGGATGGC TATCTATTCGACAAGGAGGCCATCCTGCAGTACATCGTGACCAAGAAGAA CGAGTACAGCCGCCGACTGAAGGAGTACGAGCGTCTGCGGCGCGCGGAGG AGGATAAACTGAGCCAGGAGGCCAACAGCAAGCAGCAGGCGCGCATGGAG CGCTTTGTTAATGCCGAGAAGCCAGCGATGACACCCGCCCACTCCTCGGC CGCTGCCAGCGAGAAGCCGTCGACCTCTTCCGCCGCTGCTGCCGCTTCAT CTGAATCCTCGTCCGCATCCTCGATATCCAACATGACCAACGGGCACGAG AAGAAGCTGCCCAGCTTCTGGCTGCCCTCCGAGTGCCCCAATGCCGGGTT AGCCAAGGCCCAGAAGCCCGACGCCACCATCTACTGCCCGGTGTCGCAGA AACCGCTGCGAGTCAAGGATCTGATTGATGTGAAGTTCACGCTGCTCAAG GACGGCGACACGAAGCGCTCGCTGATTGCCAAGGAGGCGCGCTACATGTG CCCCATTACCCACGACGTGCTCAGCAACGCGGTGCCCTGCGCTGTGCTGC GTCCCACTGGCGATGTGGTGACCATGGAGTGCGTGGAACGGCTGATCAGA AAGGACATGATCCATCCGCTCACGGATCGCAAGCTCAAGGAGAAGGACAT CATTCCCCTGCAGCGAGGCGGCACTGGCTACGCAACGACGAACGACCACC TCCAGGCCAAGGAAAAACGGCCCATGCTCCAGGCCTAAGACGAATTTATA TAGCCGCCAGCTACTTGGGAGCACTTCAATAGAAATGTAATCGTTTTAGC ACTAGCTAGTTTAAACAATCAATTATTTCTCCAGATTTTAAAACAATTGT GTATCATAACTTATACAAAACTTGGGTATTTTATCTGTTCCAATTCTACC TTTTCGTTTATTGCAAGACGAAGTGCATACATACTTATTGTTAAATAGGA AAAAACAAAATAAATACACTGATACTCGTACCACAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6179-RA | 1309 | CG6179-RA | 64..1298 | 1..1235 | 6175 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 18269314..18270120 | 1..807 | 3855 | 98.5 | Plus |
chrX | 22417052 | chrX | 18270352..18270669 | 917..1234 | 1590 | 100 | Plus |
chrX | 22417052 | chrX | 18270181..18270290 | 808..917 | 535 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 6454..6599 | 1063..1204 | 135 | 57.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18270181..18270289 | 808..916 | 99 | -> | Plus |
chrX | 18269314..18270120 | 1..807 | 98 | -> | Plus |
chrX | 18270352..18270669 | 917..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6179-RA | 1..924 | 65..988 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6179-RA | 1..924 | 65..988 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6179-RA | 1..924 | 65..988 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6179-RA | 1..924 | 65..988 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6179-RA | 1..924 | 65..988 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6179-RA | 42..1275 | 1..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6179-RA | 42..1275 | 1..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6179-RA | 43..1276 | 1..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6179-RA | 42..1275 | 1..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6179-RA | 43..1276 | 1..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18380124..18380930 | 1..807 | 100 | -> | Plus |
X | 18380991..18381099 | 808..916 | 100 | -> | Plus |
X | 18381162..18381479 | 917..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18380124..18380930 | 1..807 | 100 | -> | Plus |
X | 18380991..18381099 | 808..916 | 100 | -> | Plus |
X | 18381162..18381479 | 917..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18380124..18380930 | 1..807 | 100 | -> | Plus |
X | 18380991..18381099 | 808..916 | 100 | -> | Plus |
X | 18381162..18381479 | 917..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18274157..18274963 | 1..807 | 100 | -> | Plus |
arm_X | 18275024..18275132 | 808..916 | 100 | -> | Plus |
arm_X | 18275195..18275512 | 917..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18388222..18389028 | 1..807 | 100 | -> | Plus |
X | 18389089..18389197 | 808..916 | 100 | -> | Plus |
X | 18389260..18389577 | 917..1234 | 100 | Plus |
Translation from 64 to 987
> LD39230.pep MTRHARNCTAGAVYTYNEKKRDAAESGYGTNAQRLGKDSVKSFDCCSLTL QPCRRPVITKDGYLFDKEAILQYIVTKKNEYSRRLKEYERLRRAEEDKLS QEANSKQQARMERFVNAEKPAMTPAHSSAAASEKPSTSSAAAAASSESSS ASSISNMTNGHEKKLPSFWLPSECPNAGLAKAQKPDATIYCPVSQKPLRV KDLIDVKFTLLKDGDTKRSLIAKEARYMCPITHDVLSNAVPCAVLRPTGD VVTMECVERLIRKDMIHPLTDRKLKEKDIIPLQRGGTGYATTNDHLQAKE KRPMLQA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22434-PA | 310 | GF22434-PA | 1..310 | 1..307 | 1399 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19162-PA | 307 | GG19162-PA | 1..306 | 1..306 | 1606 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14677-PA | 309 | GH14677-PA | 1..309 | 1..307 | 1382 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6179-PA | 307 | CG6179-PA | 1..307 | 1..307 | 1585 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13787-PA | 309 | GI13787-PA | 1..309 | 1..307 | 1371 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26970-PA | 307 | GL26970-PA | 1..307 | 1..307 | 1303 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19415-PA | 307 | GA19415-PA | 1..307 | 1..307 | 1306 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22895-PA | 307 | GM22895-PA | 1..307 | 1..307 | 1620 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17393-PA | 675 | GD17393-PA | 1..281 | 1..281 | 1465 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13590-PA | 311 | GJ13590-PA | 1..311 | 1..307 | 1340 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19865-PA | 321 | GK19865-PA | 1..321 | 1..307 | 1344 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17724-PA | 314 | GE17724-PA | 1..314 | 1..307 | 1487 | 92 | Plus |
Translation from 64 to 987
> LD39230.hyp MTRHARNCTAGAVYTYNEKKRDAAESGYGTNAQRLGKDSVKSFDCCSLTL QPCRRPVITKDGYLFDKEAILQYIVTKKNEYSRRLKEYERLRRAEEDKLS QEANSKQQARMERFVNAEKPAMTPAHSSAAASEKPSTSSAAAAASSESSS ASSISNMTNGHEKKLPSFWLPSECPNAGLAKAQKPDATIYCPVSQKPLRV KDLIDVKFTLLKDGDTKRSLIAKEARYMCPITHDVLSNAVPCAVLRPTGD VVTMECVERLIRKDMIHPLTDRKLKEKDIIPLQRGGTGYATTNDHLQAKE KRPMLQA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6179-PA | 307 | CG6179-PA | 1..307 | 1..307 | 1585 | 100 | Plus |