BDGP Sequence Production Resources |
Search the DGRC for LD39243
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 392 |
Well: | 43 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4502-RA |
Protein status: | LD39243.pep: gold |
Preliminary Size: | 2169 |
Sequenced Size: | 2073 |
Gene | Date | Evidence |
---|---|---|
CG4502 | 2001-01-01 | Release 2 assignment |
CG4502 | 2001-09-19 | Blastp of sequenced clone |
CG4502 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4502 | 2008-04-29 | Release 5.5 accounting |
CG4502 | 2008-08-15 | Release 5.9 accounting |
CG4502 | 2008-12-18 | 5.12 accounting |
2073 bp (2073 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060422
> LD39243.complete CGCGGGCGAAAAAAGTGCAGTGCAACGAAAAGTTGGTGATACAGTGTCCA GACCAGGAAATAATTCAAAAGTCGCGTGGAAACGCCGAACCTTATTGCTT TTTGCTAGCGCTCAATAAAAGATATAATTGTTGGGAAGAACTGCATTCGA GATTGCTTCTCCCGTTGCTATTATTTGTTTCTCTGTGCGAGTGGCGAAGG AAGCGAAAGAAACGAGAATCGGGAATAAAGCGGATTGCTGATTAGCACGA ATCGTGGAAAGAAAACAGAAGAACAGCGAATTGCATTTTACACTTGGCAA ATACAATTTCCACGCCCACATTGCACCAGGAACCATTTAAAGAAGAAGAC TGAACAAACACGCCCACGAAGTACTTGTAAACTACTGAATCAAAAGCCAC CGCTCAAGTAACTCAGAAGCACACAATCAAAATCCAGCACACAGCAAATC CACTCGTTGCAGACCAAGCCAATCCCAGCCAAGATGTCGTCGCGTTCCAA GGAAAGAGTAGTCACTGCATTCCGCAAAATCTTCCACAAGTCCAGCAACA ACAATAATAATAACAACAACAACCATAATAATAATATAAATAATAATAAC AACAATGACAAGGTCGATGGCGCCACTGGCAGCAGCCCGAATATAAACAA CAATAATAATAATAATAATAATAACAACAATCACGATGGAGCAGCAGCAC CCTCTTCGGCAGGAGGCGTCGCCGTGGCCGGTGGAGCAGTAGGATCGTCG GGATCATCCGGTGCCGCAAAAAATGCCGTAGTTCGAATGGCAGCCGAGCA AGCTGTGTGGGATTCACCAGGCAAGCGGCGACGACAAGATCACAAGGTGG CGCCGACAACGGAACGCCAACTGGTGGCGGCTCCGGATCATACGATTCGA ACCCGTCGCCTGATGAAAGAATACCGCGAAATGGAGCGACTGCAGGCCAA GAACGATGCTGTCTTCACGGTGGAACTCGTCAACGATAGTCTATTCGAGT GGCACGTACGCCTGCACGTGATTGATCCCGACTCGCCGCTGGCCAGAGAT ATGGCCGAGATGGGTGTGCCGGCCATACTGTTGCACCTGAGTTTCCCCGA CAACTTCCCCTTTGCCCCGCCCTTTATGCGCGTGGTGGAGCCGCACATCG AGAAGGGTTACGTGATGGAGGGTGGCGCCATCTGCATGGAGCTCTTAACC CCACGCGGATGGGCCAGTGCCTATACGGTGGAGGCGGTCATCATGCAGTT CGCAGCCAGCGTGGTTAAGGGCCAAGGCAGGATCGCGCGCAAGCCAAAGA GTACAAAGGAGTTCACTCGGCGCCAGGCTGAGGAGTCGTTCCGTTCGCTG GTGAAGACGCACGAGAAGTACGGATGGGTAACGCCCGCCCTGTCCGATGG ATAAGCGCCGCATTCCGGACCGCAAGGAAACTCAGCTCAGATGCTCTGCG TTTGCCAACACAACCAATGCAATTTAATAATCAGCCACCCAGCCAAGTTC GCTCATAGTAATACATCAAGACATTTATCCATCTTTATACTCTCTGTTTC ATCTACTTGTCAAGTAACGAACGATTTCAATTGCAAACCATCCAAAGCAA CAAGACGAACTCCCAGAAACAAACAAACATGAAAAAACAAAACATCTAAA TAAAACAAACTAAAAACGCGCATCAAGCAACAAATTTGCTTAAAATGTAA CTCTAGCTCGTAGTCATCAGTAAATAGGAAGTTTCGCCGAATACAAAATG GATATTTAAGTATTATTAGTTAAACAGGAACAAAAAAAAAAAACAAGTAC GATGAACACCACTTTTCCACTATAATTTCCTTCGTCTAGCGCATATTAAG TTATATAAGATTTACAGAATCAATTAGTCTGATATCTTGGTTCGACTGTG TTATAATTTGTTGTGATTTTTGTTGAACTTAAACAAACCGTGAATAAACC AAATTACAACATCAGCTTGTAAACATAAGTGTGTTCCTCGAACTTCGCAC TTTCATTCTAAGCTATGCATAATAAATAAATCTAACATGTGTCTATTATC GCAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 7193914..7194647 | 2052..1319 | 3640 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 7195319..7195864 | 846..301 | 2730 | 100 | Minus |
chr2L | 23010047 | chr2L | 7194708..7195059 | 1320..969 | 1730 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 7202955..7203254 | 300..1 | 1500 | 100 | Minus |
chr2L | 23010047 | chr2L | 7195117..7195242 | 971..846 | 630 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 7194907..7195641 | 2053..1319 | 3675 | 100 | Minus |
2L | 23513712 | 2L | 7196312..7196857 | 846..301 | 2730 | 100 | Minus |
2L | 23513712 | 2L | 7195702..7196053 | 1320..969 | 1760 | 100 | Minus |
2L | 23513712 | 2L | 7203939..7204238 | 300..1 | 1500 | 100 | Minus |
2L | 23513712 | 2L | 7196110..7196235 | 971..846 | 630 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 7194907..7195641 | 2053..1319 | 3675 | 100 | Minus |
2L | 23513712 | 2L | 7196312..7196857 | 846..301 | 2730 | 100 | Minus |
2L | 23513712 | 2L | 7195702..7196053 | 1320..969 | 1760 | 100 | Minus |
2L | 23513712 | 2L | 7203939..7204238 | 300..1 | 1500 | 100 | Minus |
2L | 23513712 | 2L | 7196110..7196235 | 971..846 | 630 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tc1 | 1666 | Tc1 TC1 1666bp | 1327..1541 | 1925..1722 | 115 | 57.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 7194709..7195058 | 970..1319 | 99 | <- | Minus |
chr2L | 7195119..7195242 | 846..969 | 100 | <- | Minus |
chr2L | 7193914..7194646 | 1320..2052 | 99 | <- | Minus |
chr2L | 7195320..7195864 | 301..845 | 100 | <- | Minus |
chr2L | 7202955..7203254 | 1..300 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4502-RA | 1..921 | 484..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4502-RA | 1..921 | 484..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4502-RB | 1..921 | 484..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4502-RA | 1..921 | 484..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4502-RB | 1..921 | 484..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4502-RA | 22..2073 | 1..2052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4502-RA | 22..2073 | 1..2052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4502-RA | 27..2078 | 1..2052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4502-RA | 22..2073 | 1..2052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4502-RA | 27..2078 | 1..2052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7203939..7204238 | 1..300 | 100 | Minus | |
2L | 7194908..7195640 | 1320..2052 | 100 | <- | Minus |
2L | 7195703..7196052 | 970..1319 | 100 | <- | Minus |
2L | 7196112..7196235 | 846..969 | 100 | <- | Minus |
2L | 7196313..7196857 | 301..845 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7203939..7204238 | 1..300 | 100 | Minus | |
2L | 7194908..7195640 | 1320..2052 | 100 | <- | Minus |
2L | 7195703..7196052 | 970..1319 | 100 | <- | Minus |
2L | 7196112..7196235 | 846..969 | 100 | <- | Minus |
2L | 7196313..7196857 | 301..845 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7203939..7204238 | 1..300 | 100 | Minus | |
2L | 7194908..7195640 | 1320..2052 | 100 | <- | Minus |
2L | 7195703..7196052 | 970..1319 | 100 | <- | Minus |
2L | 7196112..7196235 | 846..969 | 100 | <- | Minus |
2L | 7196313..7196857 | 301..845 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 7196112..7196235 | 846..969 | 100 | <- | Minus |
arm_2L | 7195703..7196052 | 970..1319 | 100 | <- | Minus |
arm_2L | 7194908..7195640 | 1320..2052 | 100 | <- | Minus |
arm_2L | 7196313..7196857 | 301..845 | 100 | <- | Minus |
arm_2L | 7203939..7204238 | 1..300 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7194908..7195640 | 1320..2052 | 100 | <- | Minus |
2L | 7195703..7196052 | 970..1319 | 100 | <- | Minus |
2L | 7196112..7196235 | 846..969 | 100 | <- | Minus |
2L | 7196313..7196857 | 301..845 | 100 | <- | Minus |
2L | 7203939..7204238 | 1..300 | 100 | Minus |
Translation from 483 to 1403
> LD39243.hyp MSSRSKERVVTAFRKIFHKSSNNNNNNNNNHNNNINNNNNNDKVDGATGS SPNINNNNNNNNNNNNHDGAAAPSSAGGVAVAGGAVGSSGSSGAAKNAVV RMAAEQAVWDSPGKRRRQDHKVAPTTERQLVAAPDHTIRTRRLMKEYREM ERLQAKNDAVFTVELVNDSLFEWHVRLHVIDPDSPLARDMAEMGVPAILL HLSFPDNFPFAPPFMRVVEPHIEKGYVMEGGAICMELLTPRGWASAYTVE AVIMQFAASVVKGQGRIARKPKSTKEFTRRQAEESFRSLVKTHEKYGWVT PALSDG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4502-PA | 306 | CG4502-PA | 1..306 | 1..306 | 1601 | 100 | Plus |
CG4502-PB | 306 | CG4502-PB | 1..306 | 1..306 | 1601 | 100 | Plus |
CG2924-PD | 397 | CG2924-PD | 224..397 | 140..306 | 452 | 51.7 | Plus |
CG2924-PB | 397 | CG2924-PB | 224..397 | 140..306 | 452 | 51.7 | Plus |
CG2924-PE | 397 | CG2924-PE | 224..397 | 140..306 | 452 | 51.7 | Plus |
Translation from 483 to 1403
> LD39243.pep MSSRSKERVVTAFRKIFHKSSNNNNNNNNNHNNNINNNNNNDKVDGATGS SPNINNNNNNNNNNNNHDGAAAPSSAGGVAVAGGAVGSSGSSGAAKNAVV RMAAEQAVWDSPGKRRRQDHKVAPTTERQLVAAPDHTIRTRRLMKEYREM ERLQAKNDAVFTVELVNDSLFEWHVRLHVIDPDSPLARDMAEMGVPAILL HLSFPDNFPFAPPFMRVVEPHIEKGYVMEGGAICMELLTPRGWASAYTVE AVIMQFAASVVKGQGRIARKPKSTKEFTRRQAEESFRSLVKTHEKYGWVT PALSDG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24417-PA | 306 | GF24417-PA | 1..306 | 1..306 | 1185 | 82.2 | Plus |
Dana\GF21964-PA | 400 | GF21964-PA | 227..400 | 140..306 | 479 | 51.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23546-PA | 298 | GG23546-PA | 1..298 | 1..306 | 1251 | 92.5 | Plus |
Dere\GG23547-PA | 205 | GG23547-PA | 1..205 | 102..306 | 1071 | 95.1 | Plus |
Dere\GG12629-PA | 397 | GG12629-PA | 224..397 | 140..306 | 479 | 51.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13159-PA | 308 | GH13159-PA | 1..308 | 1..306 | 1067 | 78.2 | Plus |
Dgri\GH24254-PA | 394 | GH24254-PA | 221..394 | 140..306 | 488 | 52.9 | Plus |
Dgri\GH10576-PA | 174 | GH10576-PA | 3..174 | 142..306 | 483 | 52.9 | Plus |
Dgri\GH13122-PA | 381 | GH13122-PA | 205..381 | 137..306 | 396 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4502-PA | 306 | CG4502-PA | 1..306 | 1..306 | 1601 | 100 | Plus |
CG4502-PB | 306 | CG4502-PB | 1..306 | 1..306 | 1601 | 100 | Plus |
CG2924-PD | 397 | CG2924-PD | 224..397 | 140..306 | 452 | 51.7 | Plus |
CG2924-PB | 397 | CG2924-PB | 224..397 | 140..306 | 452 | 51.7 | Plus |
CG2924-PE | 397 | CG2924-PE | 224..397 | 140..306 | 452 | 51.7 | Plus |
CG2924-PA | 397 | CG2924-PA | 224..397 | 140..306 | 452 | 51.7 | Plus |
Hr4-PE | 1842 | CG43934-PE | 257..304 | 20..67 | 166 | 62.5 | Plus |
Hr4-PK | 1843 | CG43934-PK | 257..304 | 20..67 | 166 | 62.5 | Plus |
Hr4-PJ | 1843 | CG43934-PJ | 257..304 | 20..67 | 166 | 62.5 | Plus |
Hr4-PG | 1986 | CG43934-PG | 400..447 | 20..67 | 166 | 62.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17799-PA | 323 | GI17799-PA | 1..323 | 1..306 | 1069 | 72.8 | Plus |
Dmoj\GI21448-PA | 401 | GI21448-PA | 228..401 | 140..306 | 489 | 52.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16225-PA | 290 | GL16225-PA | 1..290 | 1..306 | 1080 | 75.5 | Plus |
Dper\GL13385-PA | 390 | GL13385-PA | 217..390 | 140..306 | 484 | 52.3 | Plus |
Dper\GL20899-PA | 389 | GL20899-PA | 219..389 | 142..306 | 418 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18226-PA | 290 | GA18226-PA | 1..290 | 1..306 | 1080 | 75.5 | Plus |
Dpse\GA15522-PA | 390 | GA15522-PA | 217..390 | 140..306 | 484 | 52.3 | Plus |
Dpse\GA28233-PA | 389 | GA28233-PA | 219..389 | 142..306 | 424 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13615-PA | 302 | GM13615-PA | 1..302 | 1..306 | 1249 | 94.8 | Plus |
Dsec\GM18895-PA | 397 | GM18895-PA | 224..397 | 140..306 | 479 | 51.7 | Plus |
Dsec\GM23086-PA | 326 | GM23086-PA | 196..326 | 183..306 | 320 | 47.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22508-PA | 301 | GD22508-PA | 1..301 | 1..306 | 1548 | 96.1 | Plus |
Dsim\GD16376-PA | 397 | GD16376-PA | 224..397 | 140..306 | 479 | 51.7 | Plus |
Dsim\GD17538-PA | 397 | GD17538-PA | 224..397 | 140..306 | 444 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17623-PA | 325 | GJ17623-PA | 1..325 | 1..306 | 1108 | 72.9 | Plus |
Dvir\GJ16469-PA | 396 | GJ16469-PA | 223..396 | 140..306 | 489 | 52.3 | Plus |
Dvir\GJ23257-PA | 381 | GJ23257-PA | 208..381 | 140..306 | 466 | 50 | Plus |