BDGP Sequence Production Resources |
Search the DGRC for LD39271
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 392 |
Well: | 71 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17904-RA |
Protein status: | LD39271.pep: gold |
Preliminary Size: | 1187 |
Sequenced Size: | 1060 |
Gene | Date | Evidence |
---|---|---|
CG17904 | 2001-01-01 | Release 2 assignment |
CG17904 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17904 | 2003-02-22 | Blastp of sequenced clone |
CG17904 | 2008-04-29 | Release 5.5 accounting |
CG17904 | 2008-08-15 | Release 5.9 accounting |
CG17904 | 2008-12-18 | 5.12 accounting |
1060 bp (1060 high quality bases) assembled on 2003-02-22
GenBank Submission: AY069623
> LD39271.complete TTCATTTCACAATTAGTTTACGGAATTCGAACTATTGAAACTAAGAGCCA TGCAGGCACCACCTCCGGAACACTGTCCTGGCGTCGAGAGCGAGGAGGCG GGCAAGGGAAGTGCCTGTTCGGGCTGCCCCAACCAAGGACTCTGCAGCGA TCCCAACAAGAAACTCGAAGATCCCGGCAAGGCTTTGGTGGTCGAATCCA TGAAAGATGTCAAACACAAGCTGCTGATCCTGTCCGGGAAAGGCGGCGTT GGCAAGAGCACGGTAACCAGCTTGCTAACCCGCTATCTGGCCAGAAGTAA TCCGGACAGTAACTTCGGCGTGCTTGATATCGACATTTGCGGTCCATCGC AACCGCGTTTGATGGGCGCCCTGGGGGAGAGTGTCCACCAGTCTGGGTAC GGCTGGTCACCTGTGGGAATCGAAGACAACGTGTGTCTGATGTCCATCGG ATTTCTTCTGGGCTCTGTGGACGATGCCATTATTTGGCGAGGACCCAAGA AGAATGGCATGATCAGGCAGTTTCTGAGCGAGGTGGACTGGGGAAATCTG GATCTCCTGCTACTGGACACACCACCTGGAACTTCCGATGAGCACCTGTC TGTGGTTTCGTACCTGAAAGACGACGCCAACCCGGAGTCCCTGCGCGCCG TGATGGTGACCACTCCACAGGAGGTGTCTCTGCTGGACGTGCGCAAGGAG ATCAACTTTTGTAAAAAGCAAAATATCCCCATTGTGGGCGTGATCGAGAA TATGAGCAGTTTCCGTTGCGGCCATTGTGGAAATAGCTCCGAAATCTTTC CAGCCAAAACCGGAGGAGCCGCTGCCATGTGCGCCGAAATGGGAATCCCG CTGTTGGGCTCCCTGCCTCTGGATCAACAGATATCCAAAGCCTGCGATTC TGGCGAGGATTTAACTGAGTTTAAGAATGTCACCACTGAGGCGCTGGAAG GAATTTGCTCAAAGATTATGGCCAGCTTTAGTTAAGAATAAGTTAAAGAC CACTCAGTTTTTAAATAAAAAAAAAGATGCCTGTACAATTTTAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17904-RA | 1480 | CG17904-RA | 23..1065 | 1..1043 | 5215 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 16731325..16732366 | 1..1042 | 5150 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16732583..16733625 | 1..1043 | 5215 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16732583..16733625 | 1..1043 | 5215 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
copia | 5143 | copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). | 1123..1220 | 926..1028 | 116 | 60.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16731325..16732366 | 1..1042 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17904-RA | 1..936 | 50..985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17904-RA | 1..936 | 50..985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17904-RA | 1..936 | 50..985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17904-RA | 1..936 | 50..985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17904-RA | 1..936 | 50..985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17904-RA | 23..1064 | 1..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17904-RA | 20..1061 | 1..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17904-RA | 34..1075 | 1..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17904-RA | 23..1064 | 1..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17904-RA | 34..1075 | 1..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16732583..16733624 | 1..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16732583..16733624 | 1..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16732583..16733624 | 1..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16732583..16733624 | 1..1042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16732583..16733624 | 1..1042 | 100 | Plus |
Translation from 49 to 984
> LD39271.pep MQAPPPEHCPGVESEEAGKGSACSGCPNQGLCSDPNKKLEDPGKALVVES MKDVKHKLLILSGKGGVGKSTVTSLLTRYLARSNPDSNFGVLDIDICGPS QPRLMGALGESVHQSGYGWSPVGIEDNVCLMSIGFLLGSVDDAIIWRGPK KNGMIRQFLSEVDWGNLDLLLLDTPPGTSDEHLSVVSYLKDDANPESLRA VMVTTPQEVSLLDVRKEINFCKKQNIPIVGVIENMSSFRCGHCGNSSEIF PAKTGGAAAMCAEMGIPLLGSLPLDQQISKACDSGEDLTEFKNVTTEALE GICSKIMASFS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20875-PA | 310 | GF20875-PA | 4..310 | 5..311 | 1436 | 90.2 | Plus |
Dana\GF10354-PA | 261 | GF10354-PA | 2..254 | 51..306 | 546 | 46.2 | Plus |
Dana\GF22737-PA | 310 | GF22737-PA | 9..213 | 49..263 | 291 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22765-PA | 311 | GG22765-PA | 1..311 | 1..311 | 1584 | 96.1 | Plus |
Dere\GG16127-PA | 260 | GG16127-PA | 2..254 | 51..306 | 566 | 47.3 | Plus |
Dere\GG21464-PA | 294 | GG21464-PA | 16..283 | 38..311 | 309 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11560-PA | 311 | GH11560-PA | 1..311 | 1..310 | 1375 | 83.9 | Plus |
Dgri\GH14587-PA | 264 | GH14587-PA | 2..256 | 51..308 | 540 | 45.4 | Plus |
Dgri\GH13628-PA | 292 | GH13628-PA | 32..254 | 49..285 | 290 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17904-PA | 311 | CG17904-PA | 1..311 | 1..311 | 1635 | 100 | Plus |
CG4858-PA | 260 | CG4858-PA | 5..254 | 54..306 | 556 | 47.9 | Plus |
CG3262-PE | 293 | CG3262-PE | 38..252 | 54..285 | 305 | 36.6 | Plus |
CG3262-PD | 293 | CG3262-PD | 38..252 | 54..285 | 305 | 36.6 | Plus |
CG3262-PF | 207 | CG3262-PF | 22..166 | 127..285 | 229 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17051-PA | 310 | GI17051-PA | 1..310 | 1..310 | 1379 | 86.1 | Plus |
Dmoj\GI13405-PA | 264 | GI13405-PA | 2..224 | 51..278 | 549 | 47.4 | Plus |
Dmoj\GI11769-PA | 297 | GI11769-PA | 15..254 | 38..285 | 305 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18780-PA | 311 | GL18780-PA | 1..311 | 1..311 | 1422 | 87.5 | Plus |
Dper\GL12799-PA | 255 | GL12799-PA | 2..253 | 51..308 | 511 | 43.9 | Plus |
Dper\GL21144-PA | 299 | GL21144-PA | 39..259 | 49..285 | 279 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14715-PA | 311 | GA14715-PA | 1..311 | 1..311 | 1419 | 87.1 | Plus |
Dpse\GA18483-PA | 258 | GA18483-PA | 2..256 | 51..308 | 541 | 45 | Plus |
Dpse\GA17025-PA | 299 | GA17025-PA | 39..259 | 49..285 | 279 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17199-PA | 311 | GM17199-PA | 1..311 | 1..311 | 1604 | 97.7 | Plus |
Dsec\GM22307-PA | 260 | GM22307-PA | 2..224 | 51..278 | 558 | 49.6 | Plus |
Dsec\GM18803-PA | 293 | GM18803-PA | 38..275 | 54..302 | 308 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24076-PA | 311 | GD24076-PA | 1..311 | 1..311 | 1601 | 97.4 | Plus |
Dsim\GD14899-PA | 260 | GD14899-PA | 2..224 | 51..278 | 558 | 49.6 | Plus |
Dsim\GD21613-PA | 293 | GD21613-PA | 33..275 | 49..302 | 308 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17301-PA | 310 | GJ17301-PA | 1..310 | 1..310 | 1389 | 85.2 | Plus |
Dvir\GJ11530-PA | 266 | GJ11530-PA | 2..224 | 51..278 | 542 | 47.4 | Plus |
Dvir\GJ13135-PA | 298 | GJ13135-PA | 32..254 | 49..285 | 282 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24826-PA | 310 | GK24826-PA | 4..310 | 5..311 | 1376 | 85.7 | Plus |
Dwil\GK12055-PA | 261 | GK12055-PA | 2..254 | 51..306 | 545 | 45.8 | Plus |
Dwil\GK23989-PA | 303 | GK23989-PA | 40..260 | 49..285 | 297 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12759-PA | 311 | GE12759-PA | 1..311 | 1..311 | 1605 | 97.7 | Plus |
Dyak\GE23241-PA | 260 | GE23241-PA | 2..258 | 51..310 | 568 | 47.3 | Plus |
Dyak\GE19695-PA | 260 | GE19695-PA | 2..258 | 51..310 | 567 | 47 | Plus |
Dyak\GE12953-PA | 293 | GE12953-PA | 33..252 | 49..285 | 309 | 37.1 | Plus |
Translation from 49 to 984
> LD39271.hyp MQAPPPEHCPGVESEEAGKGSACSGCPNQGLCSDPNKKLEDPGKALVVES MKDVKHKLLILSGKGGVGKSTVTSLLTRYLARSNPDSNFGVLDIDICGPS QPRLMGALGESVHQSGYGWSPVGIEDNVCLMSIGFLLGSVDDAIIWRGPK KNGMIRQFLSEVDWGNLDLLLLDTPPGTSDEHLSVVSYLKDDANPESLRA VMVTTPQEVSLLDVRKEINFCKKQNIPIVGVIENMSSFRCGHCGNSSEIF PAKTGGAAAMCAEMGIPLLGSLPLDQQISKACDSGEDLTEFKNVTTEALE GICSKIMASFS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17904-PA | 311 | CG17904-PA | 1..311 | 1..311 | 1635 | 100 | Plus |
CG4858-PA | 260 | CG4858-PA | 5..254 | 54..306 | 556 | 47.9 | Plus |
CG3262-PE | 293 | CG3262-PE | 38..252 | 54..285 | 305 | 36.6 | Plus |
CG3262-PD | 293 | CG3262-PD | 38..252 | 54..285 | 305 | 36.6 | Plus |
CG3262-PF | 207 | CG3262-PF | 22..166 | 127..285 | 229 | 35.8 | Plus |