Clone LD39308 Report

Search the DGRC for LD39308

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:393
Well:8
Vector:pOT2
Associated Gene/Transcriptstck-RA
Protein status:LD39308.pep: gold
Preliminary Size:2899
Sequenced Size:2713

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7954 2001-01-01 Release 2 assignment
CG7954 2001-07-04 Blastp of sequenced clone
CG7954 2003-01-01 Sim4 clustering to Release 3
stck 2008-04-29 Release 5.5 accounting
stck 2008-08-15 Release 5.9 accounting
stck 2008-12-18 5.12 accounting

Clone Sequence Records

LD39308.complete Sequence

2713 bp (2713 high quality bases) assembled on 2001-07-04

GenBank Submission: AY060424

> LD39308.complete
TTAAATGAAAAGTAATTTAATTGCAGCAAACTGTGGCTTTAATTAAAAAG
GTTTCTCTGAAGGTAAAAAGTACTTTTTCCGTTGAATGCAATTCTTCAAA
TGTGAACATGCTTAAGTGAAACGCGTGAAATTCCAGAGATTTGCCCATTT
TGGCAATATAGGTGTTGTTGTTTTTGTGCTGCGATAGCGCTGCGCAGATC
GTCTTCTTGGCTGAAAATCAACCGGATCTGGCTAGAAGGCCGCCAAGCGA
GCAGAGCTTAAAGCCAAAAGACACAGATTGATCATTTCTATATGTTTTTG
CAGTGTTTCACTCGCCGTGATCAGAAAACGTTGTACACCAGGTGCAACAG
GTGCCGTTGTTCGCAAGTGAAAACCAGTTGAAAGCAACTAAAAAAGAAAA
GCCCACAGAATGCCGCCCGTGCAGTAAGCAGAATGTTCCGCCCCACTTTC
TTAACGTCCTTGTCTTCAAAACGCCCACATATTGCATCATTTGGCAGCAT
AATAATCATCGTTATCCATTCGCACAAATAAGCATTTCGCTAATTAATAA
AAAAATATAACTAATTCAGGCTAGCAGTGCCTATCATTCATGCCCTAATC
CAGCGTTAACCCTCTGCCAGTGATGGTGGTGCTTTGGACCCCCATTCAAT
GCAATTTTCCTGCCAGATGTTTACTCCATCGATGACGTCATGGTCATATT
CAAATTTATTTTTAAACGCCGCCACTCGAGTGTGTGTGTGTGTTTGTGCG
AGAGTGCGTGTCTGTGTATTGTTTACTCTTCGTATTTTTGTGTGTATTCG
TCGGATTTGATTATGATGAGTGGGCCGCTGTTGTGTTGGCGGCAAACCCA
ATTCCAATTGGATGCTTGAATTTGTAACCCCTTTTGGAGGCCAAGGAATG
TTCAATGACTCAACCAGTAATGGGGAGTTGATAGTTACATCTTATTATAT
ATATTGTTTATATACAAACTTTTCAAATGGCGCTCCTGCTTGTAATAATT
ACTTCAATTACTCATTATAGCCATTCATTGTTATCCAGCTTAAAGCGAAT
ATGATAGTTCTTCGTATATATTTTATATATGTATATATAACCTGTTCCGA
AACGATATATCACCAAGCCATCACATCTGCAGCGTATCACGCTTGATATC
CAACTGCCATGCGACACTCTCTGTAATGAAAGCTAAACTTCCACGGAATG
CCAGAAAGCTTTTTGGCTGTGCATTCGAAGGAAATATGATTCAGACATCG
TCAACAGAGCCGGCAAGCGATAAGTCTCATTGTTTTGTCCAGTTTCTCAT
TTCACGCCCTGCCCTAAAGTCGTTTTTCTTTGCGCTCAAGCTATAACCAT
GATGTACTCTAAGGCTGAAGTGTAATGGCCTCTGAATTGGTTAGTTACTT
ACCAACAACTGATCCTGATCTTCTTCTTAATTCACAGAGTCCAGGCAGCG
AACATGTCGCTGGGTGCCATGCATTGTACGCGATGTGCCGACGGCTTCGA
GCCGACTGAGAAGATTGTTAACTCCAATGGAGAACTCTGGCACACCCAGT
GCTTCGTATGTGCCCAGTGCTTCCGACCCTTCCAGGATGGGATATTCTAC
GAGTTCGAGGGCCGTAAGTACTGTGAACGCGACTTTCACGTGCTCTTCGC
TCCCTGCTGCAACAAGTGCGGCGAGTTCGTCATCGGACGGGTCATCAAGG
CCATGTCAGCTAGCTGGCATCCACAGTGCTTCCGCTGCCAATTGTGCGCC
AAGGAGCTGGCTGATTGCGGATTCATCAAGAACCAGAACCGCGCCTTGTG
TCACGAGTGCAATGCCAAGGTGAAGGCGGAGATTACCGGCCGCTATGTAT
GCCAAAAATGCCACGGCCTCATCGACGAGGAGCCTTTGCGATTCCGGGGC
GAAGTGTACCACGGCTATCACTTCAGTTGCACGGCCTGCGGCACAGAGTT
GGATTCCACTGCTCGGGAGGTCAAGAGCCGGCCAGGATTGGCTGCTAACG
ATATGAACGAACTGTATTGTCTGCGTTGTCACGATAAAATGGGCATTCCC
ATATGTGGTGCCTGTCGTCGTCCGATTGAGGAGAGGGTGGTAACGGCGCT
CGGAAAGCACTGGCATGTGGAACATTTCGTGTGCGCCAAGTGCGAGAAAC
CCTTCTTGGGTCACCGACACTACGAGAAGCGGGGATTGGCCTACTGCGAG
ACGCACTATCATCAGCTCTTTGGCAACCTGTGCTTCGTCTGCAACCAGGT
TATTGGAGGCGATGTTTTCACTGCCTTGAACAAGGCCTGGTGTGTGCACC
ACTTTGCGTGCTCCGTGTGCGACACGAAGATGACACAAAAATCGAAATTC
TACGAGTACGACGAGAAGCCGGTGTGCAAAAAGTGCTATGACCGATTTCC
AAACGAACTCAGACGACGTCTGCGCACCGCCCACGAGATGACAATGAAAA
AGAACACCTAATGCCTTGGAGCGAGTCTCAGATCCACACCAAACAGTGCC
TTTGTCGTTGTAGACCCGCTTTCACTACCATTTTTAACATTTGAGAAACT
AAAACCAAACAAACTAAAACCTCTTGTGCATGTCCTTTCCGTCTGTTGTA
ATCCGGTTGTGTGTAACTTAAATTTTAAATCGAGAATCAACGGCATCAAT
AGCTAGGGAACATAACATTGTGTATTAAAAGCCTTTAACGTTGTTAAAAA
AAAAAAAAAAAAA

LD39308.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:29:33
Subject Length Description Subject Range Query Range Score Percent Strand
stck-RB 1844 stck-RB 463..1721 1438..2696 6295 100 Plus
stck.d 1743 stck.d 362..1620 1438..2696 6295 100 Plus
stck.g 1579 stck.g 259..1517 1438..2696 6295 100 Plus
stck-RB 1844 stck-RB 40..462 1..423 2115 100 Plus
stck.d 1743 stck.d 1..361 63..423 1805 100 Plus
stck.g 1579 stck.g 1..258 1114..1371 1290 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 4183049..4184605 1..1557 7770 99.9 Plus
chr3R 27901430 chr3R 4185545..4185976 2264..2695 2160 100 Plus
chr3R 27901430 chr3R 4184664..4184969 1558..1863 1530 100 Plus
chr3R 27901430 chr3R 4185222..4185481 2005..2264 1300 100 Plus
chr3R 27901430 chr3R 4185024..4185165 1864..2005 710 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:34:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:08:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8357034..8358590 1..1557 7785 100 Plus
3R 32079331 3R 8359529..8359961 2264..2696 2165 100 Plus
3R 32079331 3R 8358649..8358954 1558..1863 1530 100 Plus
3R 32079331 3R 8359206..8359465 2005..2264 1300 100 Plus
3R 32079331 3R 8359009..8359150 1864..2005 710 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 8097865..8099421 1..1557 7785 100 Plus
3R 31820162 3R 8100360..8100792 2264..2696 2165 100 Plus
3R 31820162 3R 8099480..8099785 1558..1863 1530 100 Plus
3R 31820162 3R 8100037..8100296 2005..2264 1300 100 Plus
3R 31820162 3R 8099840..8099981 1864..2005 710 100 Plus
Blast to na_te.dros performed on 2019-03-15 16:08:58 has no hits.

LD39308.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:10:12 Download gff for LD39308.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 4183049..4184605 1..1557 97 -> Plus
chr3R 4184664..4184969 1558..1863 100 -> Plus
chr3R 4185024..4185165 1864..2005 100 -> Plus
chr3R 4185223..4185481 2006..2264 100 -> Plus
chr3R 4185546..4185976 2265..2695 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:21:33 Download gff for LD39308.complete
Subject Subject Range Query Range Percent Splice Strand
stck-RC 24..1047 1438..2461 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:17:19 Download gff for LD39308.complete
Subject Subject Range Query Range Percent Splice Strand
stck-RC 24..1047 1438..2461 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:53:44 Download gff for LD39308.complete
Subject Subject Range Query Range Percent Splice Strand
stck-RB 15..1038 1438..2461 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:48:48 Download gff for LD39308.complete
Subject Subject Range Query Range Percent Splice Strand
stck-RB 15..1038 1438..2461 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:27:47 Download gff for LD39308.complete
Subject Subject Range Query Range Percent Splice Strand
stck-RB 15..1038 1438..2461 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2008-11-11 00:11:59 has no hits.
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2011-03-16 20:17:19 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 01:53:44 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 17:33:18 Download gff for LD39308.complete
Subject Subject Range Query Range Percent Splice Strand
stck-RA 68..127 1..60 100 == Plus
stck-RA 128..1387 1436..2695 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-26 21:27:47 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:10:12 Download gff for LD39308.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8357034..8358590 1..1557 100 -> Plus
3R 8358649..8358954 1558..1863 100 -> Plus
3R 8359009..8359150 1864..2005 100 -> Plus
3R 8359207..8359465 2006..2264 100 -> Plus
3R 8359530..8359960 2265..2695 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:10:12 Download gff for LD39308.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8357034..8358590 1..1557 100 -> Plus
3R 8358649..8358954 1558..1863 100 -> Plus
3R 8359009..8359150 1864..2005 100 -> Plus
3R 8359207..8359465 2006..2264 100 -> Plus
3R 8359530..8359960 2265..2695 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:10:12 Download gff for LD39308.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8357034..8358590 1..1557 100 -> Plus
3R 8358649..8358954 1558..1863 100 -> Plus
3R 8359009..8359150 1864..2005 100 -> Plus
3R 8359207..8359465 2006..2264 100 -> Plus
3R 8359530..8359960 2265..2695 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:53:44 Download gff for LD39308.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4182756..4184312 1..1557 100 -> Plus
arm_3R 4184371..4184676 1558..1863 100 -> Plus
arm_3R 4184731..4184872 1864..2005 100 -> Plus
arm_3R 4184929..4185187 2006..2264 100 -> Plus
arm_3R 4185252..4185682 2265..2695 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:26:56 Download gff for LD39308.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8097865..8099421 1..1557 100 -> Plus
3R 8099480..8099785 1558..1863 100 -> Plus
3R 8099840..8099981 1864..2005 100 -> Plus
3R 8100038..8100296 2006..2264 100 -> Plus
3R 8100361..8100791 2265..2695 100   Plus

LD39308.pep Sequence

Translation from 1453 to 2460

> LD39308.pep
MSLGAMHCTRCADGFEPTEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYE
FEGRKYCERDFHVLFAPCCNKCGEFVIGRVIKAMSASWHPQCFRCQLCAK
ELADCGFIKNQNRALCHECNAKVKAEITGRYVCQKCHGLIDEEPLRFRGE
VYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGIPI
CGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCET
HYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCDTKMTQKSKFY
EYDEKPVCKKCYDRFPNELRRRLRTAHEMTMKKNT*

LD39308.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:54:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16102-PA 348 GF16102-PA 14..348 1..335 1789 99.1 Plus
Dana\GF15196-PA 620 GF15196-PA 363..618 68..315 315 30.1 Plus
Dana\GF22290-PA 178 GF22290-PA 6..176 132..311 249 32 Plus
Dana\GF15196-PA 620 GF15196-PA 364..537 133..316 233 33.7 Plus
Dana\GF15196-PA 620 GF15196-PA 374..620 20..257 228 26.9 Plus
Dana\GF15150-PA 178 GF15150-PA 1..176 127..311 226 29 Plus
Dana\GF19820-PA 152 GF19820-PA 5..150 132..289 199 29.7 Plus
Dana\GF22290-PA 178 GF22290-PA 75..178 19..121 192 36.5 Plus
Dana\GF15150-PA 178 GF15150-PA 75..177 19..120 188 35 Plus
Dana\GF19820-PA 152 GF19820-PA 61..151 7..96 173 36.3 Plus
Dana\GF22290-PA 178 GF22290-PA 6..121 200..315 160 30.2 Plus
Dana\GF22290-PA 178 GF22290-PA 16..172 19..179 160 25.9 Plus
Dana\GF15150-PA 178 GF15150-PA 7..161 8..168 146 27.2 Plus
Dana\GF15150-PA 178 GF15150-PA 6..119 200..313 142 30.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:54:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10588-PA 348 GG10588-PA 14..348 1..335 1798 99.7 Plus
Dere\GG21635-PA 584 GG21635-PA 350..582 68..315 346 32.5 Plus
Dere\GG18228-PA 200 GG18228-PA 28..198 132..311 248 31.5 Plus
Dere\GG21635-PA 584 GG21635-PA 361..584 20..257 237 28 Plus
Dere\GG21514-PA 178 GG21514-PA 1..176 127..311 231 30.1 Plus
Dere\GG22918-PA 175 GG22918-PA 5..174 132..311 230 29.4 Plus
Dere\GG21635-PA 584 GG21635-PA 419..582 19..196 206 29.1 Plus
Dere\GG21514-PA 178 GG21514-PA 75..177 19..120 189 35 Plus
Dere\GG18228-PA 200 GG18228-PA 97..200 19..121 185 35.6 Plus
Dere\GG22918-PA 175 GG22918-PA 61..174 7..119 176 32.5 Plus
Dere\GG18228-PA 200 GG18228-PA 7..143 179..315 169 27.7 Plus
Dere\GG18228-PA 200 GG18228-PA 38..194 19..179 155 26.5 Plus
Dere\GG21514-PA 178 GG21514-PA 6..121 200..315 144 29.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:54:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14398-PA 348 GH14398-PA 14..348 1..335 1763 97 Plus
Dgri\GH13469-PA 585 GH13469-PA 351..583 68..315 346 33.3 Plus
Dgri\GH12803-PA 179 GH12803-PA 7..177 132..311 262 33.7 Plus
Dgri\GH13469-PA 585 GH13469-PA 362..585 20..257 232 27.6 Plus
Dgri\GH10298-PA 189 GH10298-PA 16..187 131..311 220 29.1 Plus
Dgri\GH20594-PA 1166 GH20594-PA 990..1164 67..251 208 29.6 Plus
Dgri\GH13469-PA 585 GH13469-PA 420..583 19..196 205 29.1 Plus
Dgri\GH20594-PA 1166 GH20594-PA 991..1162 132..309 201 30 Plus
Dgri\GH20594-PA 1166 GH20594-PA 1004..1151 22..170 182 31.2 Plus
Dgri\GH12803-PA 179 GH12803-PA 76..179 19..121 181 32.7 Plus
Dgri\GH10298-PA 189 GH10298-PA 26..172 18..168 181 29.6 Plus
Dgri\GH10298-PA 189 GH10298-PA 75..188 9..120 179 33.3 Plus
Dgri\GH12803-PA 179 GH12803-PA 1..175 1..181 162 26.9 Plus
Dgri\GH10298-PA 189 GH10298-PA 18..130 201..313 148 33.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:20
Subject Length Description Subject Range Query Range Score Percent Strand
stck-PD 335 CG7954-PD 1..335 1..335 1920 100 Plus
stck-PC 348 CG7954-PC 14..348 1..335 1920 100 Plus
stck-PB 345 CG7954-PB 11..345 1..335 1920 100 Plus
stck-PA 335 CG7954-PA 1..335 1..335 1920 100 Plus
Pax-PB 556 CG31794-PB 322..553 68..314 400 32.7 Plus
Pax-PC 557 CG31794-PC 323..554 68..314 400 32.7 Plus
Pax-PH 563 CG31794-PH 329..560 68..314 400 32.7 Plus
Pax-PK 581 CG31794-PK 347..578 68..314 400 32.7 Plus
Pax-PJ 581 CG31794-PJ 347..578 68..314 400 32.7 Plus
Pax-PG 581 CG31794-PG 347..578 68..314 400 32.7 Plus
Pax-PF 581 CG31794-PF 347..578 68..314 400 32.7 Plus
Pax-PA 581 CG31794-PA 347..578 68..314 400 32.7 Plus
Lmpt-PN 529 CG42679-PN 162..461 7..312 315 25.4 Plus
Lmpt-PD 558 CG32171-PD 191..490 7..312 315 25.4 Plus
Lmpt-PH 558 CG32171-PH 191..490 7..312 315 25.4 Plus
Lmpt-PM 559 CG42679-PM 192..491 7..312 315 25.4 Plus
Lmpt-PB 559 CG32171-PB 192..491 7..312 315 25.4 Plus
Lmpt-PG 559 CG32171-PG 192..491 7..312 315 25.4 Plus
Pax-PB 556 CG31794-PB 333..556 20..257 289 27.6 Plus
Pax-PC 557 CG31794-PC 334..557 20..257 289 27.6 Plus
Pax-PH 563 CG31794-PH 340..563 20..257 289 27.6 Plus
Pax-PK 581 CG31794-PK 358..581 20..257 289 27.6 Plus
Pax-PJ 581 CG31794-PJ 358..581 20..257 289 27.6 Plus
Pax-PG 581 CG31794-PG 358..581 20..257 289 27.6 Plus
Pax-PF 581 CG31794-PF 358..581 20..257 289 27.6 Plus
Pax-PA 581 CG31794-PA 358..581 20..257 289 27.6 Plus
Pax-PD 197 CG31794-PD 22..190 133..311 268 33.5 Plus
Pax-PD 197 CG31794-PD 22..132 201..312 258 42 Plus
CG31624-PC 178 CG31624-PC 1..176 127..311 256 29.6 Plus
CG31624-PB 178 CG31624-PB 1..176 127..311 256 29.6 Plus
CG31624-PA 178 CG31624-PA 1..176 127..311 256 29.6 Plus
CG31988-PB 178 CG31988-PB 1..176 127..311 256 29.6 Plus
CG31988-PA 178 CG31988-PA 1..176 127..311 256 29.6 Plus
CG34325-PB 179 CG34325-PB 7..179 132..313 256 31.7 Plus
CG34325-PA 179 CG34325-PA 7..179 132..313 256 31.7 Plus
CG30178-PA 187 CG30178-PA 5..180 132..317 248 28 Plus
Pax-PB 556 CG31794-PB 391..554 19..196 245 29.1 Plus
Pax-PC 557 CG31794-PC 392..555 19..196 245 29.1 Plus
Pax-PH 563 CG31794-PH 398..561 19..196 245 29.1 Plus
Pax-PK 581 CG31794-PK 416..579 19..196 245 29.1 Plus
Pax-PJ 581 CG31794-PJ 416..579 19..196 245 29.1 Plus
Pax-PG 581 CG31794-PG 416..579 19..196 245 29.1 Plus
Pax-PF 581 CG31794-PF 416..579 19..196 245 29.1 Plus
Pax-PA 581 CG31794-PA 416..579 19..196 245 29.1 Plus
Lmpt-PN 529 CG42679-PN 288..508 8..236 244 26.9 Plus
Lmpt-PD 558 CG32171-PD 317..537 8..236 244 26.9 Plus
Lmpt-PH 558 CG32171-PH 317..537 8..236 244 26.9 Plus
Lmpt-PM 559 CG42679-PM 318..538 8..236 244 26.9 Plus
Lmpt-PB 559 CG32171-PB 318..538 8..236 244 26.9 Plus
Lmpt-PG 559 CG32171-PG 318..538 8..236 244 26.9 Plus
Lmpt-PO 286 CG42679-PO 45..265 8..236 244 26.9 Plus
Lmpt-PF 286 CG32171-PF 45..265 8..236 244 26.9 Plus
Lmpt-PC 339 CG42679-PC 98..318 8..236 244 26.9 Plus
Lmpt-PJ 989 CG42679-PJ 748..968 8..236 244 26.9 Plus
Pax-PD 197 CG31794-PD 21..187 68..248 240 28.7 Plus
Lmpt-PO 286 CG42679-PO 5..263 29..293 230 24.5 Plus
Lmpt-PF 286 CG32171-PF 5..263 29..293 230 24.5 Plus
Lmpt-PC 339 CG42679-PC 58..316 29..293 230 24.5 Plus
Lmpt-PJ 989 CG42679-PJ 708..966 29..293 230 24.5 Plus
Unc-115b-PB 749 CG31332-PB 28..281 6..289 227 24.1 Plus
Unc-115b-PF 756 CG31332-PF 28..281 6..289 227 24.1 Plus
Unc-115b-PD 760 CG31332-PD 39..292 6..289 227 24.1 Plus
Unc-115b-PE 768 CG31332-PE 28..281 6..289 227 24.1 Plus
Unc-115b-PA 768 CG31332-PA 28..281 6..289 227 24.1 Plus
Unc-115a-PH 772 CG31352-PH 6..259 6..289 227 24.1 Plus
Unc-115b-PC 784 CG31332-PC 44..297 6..289 227 24.1 Plus
Unc-115a-PE 787 CG31352-PE 6..259 6..289 227 24.1 Plus
Unc-115a-PA 806 CG31352-PA 6..259 6..289 227 24.1 Plus
Unc-115a-PJ 813 CG31352-PJ 6..259 6..289 227 24.1 Plus
Unc-115a-PF 825 CG31352-PF 44..297 6..289 227 24.1 Plus
Unc-115a-PG 828 CG31352-PG 28..281 6..289 227 24.1 Plus
Unc-115a-PC 839 CG31352-PC 39..292 6..289 227 24.1 Plus
Unc-115a-PB 844 CG31352-PB 44..297 6..289 227 24.1 Plus
Pax-PD 197 CG31794-PD 90..190 19..119 225 35.6 Plus
Lmpt-PJ 989 CG42679-PJ 690..921 70..312 225 25.1 Plus
Lmpt-PC 339 CG42679-PC 48..271 78..312 221 25.1 Plus
CG31988-PB 178 CG31988-PB 66..177 11..120 217 35.7 Plus
CG31988-PA 178 CG31988-PA 66..177 11..120 217 35.7 Plus
CG34325-PB 179 CG34325-PB 76..178 19..120 215 34 Plus
CG34325-PA 179 CG34325-PA 76..178 19..120 215 34 Plus
CG31624-PC 178 CG31624-PC 66..177 11..120 210 34.8 Plus
CG31624-PB 178 CG31624-PB 66..177 11..120 210 34.8 Plus
CG31624-PA 178 CG31624-PA 66..177 11..120 210 34.8 Plus
CG34325-PC 104 CG34325-PC 2..103 20..120 210 33.3 Plus
Zasp52-PY 396 CG30084-PY 220..394 67..251 209 29.1 Plus
Zasp52-PT 651 CG30084-PT 475..649 67..251 209 29.1 Plus
Zasp52-PU 716 CG30084-PU 540..714 67..251 209 29.1 Plus
Zasp52-PR 722 CG30084-PR 546..720 67..251 209 29.1 Plus
Zasp52-PE 780 CG30084-PE 604..778 67..251 209 29.1 Plus
Lmpt-PO 286 CG42679-PO 1..218 84..312 208 24.5 Plus
Lmpt-PF 286 CG32171-PF 1..218 84..312 208 24.5 Plus
Zasp52-PY 396 CG30084-PY 221..392 132..309 205 30 Plus
Zasp52-PT 651 CG30084-PT 476..647 132..309 205 30 Plus
Zasp52-PU 716 CG30084-PU 541..712 132..309 205 30 Plus
Zasp52-PR 722 CG30084-PR 547..718 132..309 205 30 Plus
Zasp52-PE 780 CG30084-PE 605..776 132..309 205 30 Plus
Pax-PD 197 CG31794-PD 32..169 20..162 191 25.9 Plus
CG31988-PB 178 CG31988-PB 6..119 200..313 188 32.5 Plus
CG31988-PA 178 CG31988-PA 6..119 200..313 188 32.5 Plus
CG30178-PA 187 CG30178-PA 61..178 7..123 182 29.7 Plus
CG31624-PC 178 CG31624-PC 6..119 200..313 181 31.6 Plus
CG31624-PB 178 CG31624-PB 6..119 200..313 181 31.6 Plus
CG31624-PA 178 CG31624-PA 6..119 200..313 181 31.6 Plus
CG34325-PB 179 CG34325-PB 8..179 8..194 181 25 Plus
CG34325-PA 179 CG34325-PA 8..179 8..194 181 25 Plus
Lmpt-PN 529 CG42679-PN 175..342 139..313 180 28.1 Plus
Lmpt-PD 558 CG32171-PD 204..371 139..313 180 28.1 Plus
Lmpt-PH 558 CG32171-PH 204..371 139..313 180 28.1 Plus
Lmpt-PM 559 CG42679-PM 205..372 139..313 180 28.1 Plus
Lmpt-PB 559 CG32171-PB 205..372 139..313 180 28.1 Plus
Lmpt-PG 559 CG32171-PG 205..372 139..313 180 28.1 Plus
Zasp52-PY 396 CG30084-PY 234..378 22..167 178 31.8 Plus
Zasp52-PT 651 CG30084-PT 489..633 22..167 178 31.8 Plus
Zasp52-PU 716 CG30084-PU 554..698 22..167 178 31.8 Plus
Zasp52-PR 722 CG30084-PR 560..704 22..167 178 31.8 Plus
Zasp52-PE 780 CG30084-PE 618..762 22..167 178 31.8 Plus
CG34325-PC 104 CG34325-PC 2..104 211..313 176 35.6 Plus
CG31988-PB 178 CG31988-PB 7..161 8..168 167 25.9 Plus
CG31988-PA 178 CG31988-PA 7..161 8..168 167 25.9 Plus
CG31624-PC 178 CG31624-PC 7..161 8..168 163 24.7 Plus
CG31624-PB 178 CG31624-PB 7..161 8..168 163 24.7 Plus
CG31624-PA 178 CG31624-PA 7..161 8..168 163 24.7 Plus
Lmpt-PN 529 CG42679-PN 346..506 5..166 161 25.3 Plus
Lmpt-PD 558 CG32171-PD 375..535 5..166 161 25.3 Plus
Lmpt-PH 558 CG32171-PH 375..535 5..166 161 25.3 Plus
Lmpt-PM 559 CG42679-PM 376..536 5..166 161 25.3 Plus
Lmpt-PB 559 CG32171-PB 376..536 5..166 161 25.3 Plus
Lmpt-PG 559 CG32171-PG 376..536 5..166 161 25.3 Plus
Lmpt-PO 286 CG42679-PO 103..263 5..166 161 25.3 Plus
Lmpt-PF 286 CG32171-PF 103..263 5..166 161 25.3 Plus
Lmpt-PC 339 CG42679-PC 156..316 5..166 161 25.3 Plus
Lmpt-PJ 989 CG42679-PJ 806..966 5..166 161 25.3 Plus
CG30178-PA 187 CG30178-PA 1..175 3..205 156 22.7 Plus
Pax-PB 556 CG31794-PB 318..433 222..312 155 30.8 Plus
Pax-PC 557 CG31794-PC 319..434 222..312 155 30.8 Plus
Pax-PH 563 CG31794-PH 325..440 222..312 155 30.8 Plus
Pax-PK 581 CG31794-PK 343..458 222..312 155 30.8 Plus
Pax-PJ 581 CG31794-PJ 343..458 222..312 155 30.8 Plus
Pax-PG 581 CG31794-PG 343..458 222..312 155 30.8 Plus
Pax-PF 581 CG31794-PF 343..458 222..312 155 30.8 Plus
Pax-PA 581 CG31794-PA 343..458 222..312 155 30.8 Plus
Lmpt-PN 529 CG42679-PN 407..523 5..119 155 30.6 Plus
Lmpt-PD 558 CG32171-PD 436..552 5..119 155 30.6 Plus
Lmpt-PH 558 CG32171-PH 436..552 5..119 155 30.6 Plus
Lmpt-PM 559 CG42679-PM 437..553 5..119 155 30.6 Plus
Lmpt-PB 559 CG32171-PB 437..553 5..119 155 30.6 Plus
Lmpt-PG 559 CG32171-PG 437..553 5..119 155 30.6 Plus
Lmpt-PO 286 CG42679-PO 164..280 5..119 155 30.6 Plus
Lmpt-PF 286 CG32171-PF 164..280 5..119 155 30.6 Plus
Lmpt-PC 339 CG42679-PC 217..333 5..119 155 30.6 Plus
Lmpt-PJ 989 CG42679-PJ 867..983 5..119 155 30.6 Plus
Lmpt-PC 339 CG42679-PC 43..152 208..313 154 33.3 Plus
Unc-115b-PB 749 CG31332-PB 30..145 201..316 154 25.9 Plus
Unc-115b-PF 756 CG31332-PF 30..145 201..316 154 25.9 Plus
Unc-115b-PD 760 CG31332-PD 41..156 201..316 154 25.9 Plus
Unc-115b-PE 768 CG31332-PE 30..145 201..316 154 25.9 Plus
Unc-115b-PA 768 CG31332-PA 30..145 201..316 154 25.9 Plus
Unc-115a-PH 772 CG31352-PH 8..123 201..316 154 25.9 Plus
Unc-115b-PC 784 CG31332-PC 46..161 201..316 154 25.9 Plus
Unc-115a-PE 787 CG31352-PE 8..123 201..316 154 25.9 Plus
Unc-115a-PA 806 CG31352-PA 8..123 201..316 154 25.9 Plus
Unc-115a-PJ 813 CG31352-PJ 8..123 201..316 154 25.9 Plus
Unc-115a-PF 825 CG31352-PF 46..161 201..316 154 25.9 Plus
Unc-115a-PG 828 CG31352-PG 30..145 201..316 154 25.9 Plus
Unc-115a-PC 839 CG31352-PC 41..156 201..316 154 25.9 Plus
Unc-115a-PB 844 CG31352-PB 46..161 201..316 154 25.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:54:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10041-PA 348 GI10041-PA 14..348 1..335 1753 96.4 Plus
Dmoj\GI17221-PA 605 GI17221-PA 371..603 68..315 346 32.5 Plus
Dmoj\GI15958-PA 179 GI15958-PA 7..179 132..313 252 32.2 Plus
Dmoj\GI17221-PA 605 GI17221-PA 382..605 20..257 233 27.6 Plus
Dmoj\GI17994-PA 183 GI17994-PA 11..181 132..311 233 29.8 Plus
Dmoj\GI19738-PA 1709 GI19738-PA 1533..1707 67..251 207 29.6 Plus
Dmoj\GI17221-PA 605 GI17221-PA 440..603 19..196 206 29.1 Plus
Dmoj\GI19738-PA 1709 GI19738-PA 1534..1705 132..309 199 30 Plus
Dmoj\GI15958-PA 179 GI15958-PA 76..178 19..120 196 37.9 Plus
Dmoj\GI17994-PA 183 GI17994-PA 80..182 19..120 189 35.9 Plus
Dmoj\GI19738-PA 1709 GI19738-PA 1547..1694 22..170 181 31.2 Plus
Dmoj\GI15958-PA 179 GI15958-PA 1..173 1..179 155 25.6 Plus
Dmoj\GI17994-PA 183 GI17994-PA 11..124 200..313 155 34.2 Plus
Dmoj\GI17994-PA 183 GI17994-PA 20..166 18..168 146 26.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:54:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24193-PA 348 GL24193-PA 14..348 1..335 1778 98.5 Plus
Dper\GL21108-PA 639 GL21108-PA 387..637 68..315 320 31.5 Plus
Dper\GL25856-PA 177 GL25856-PA 1..176 127..311 238 30.9 Plus
Dper\GL21108-PA 639 GL21108-PA 398..639 20..257 231 27.4 Plus
Dper\GL11647-PA 185 GL11647-PA 5..174 132..311 204 30 Plus
Dper\GL20860-PA 340 GL20860-PA 96..319 5..236 195 26.9 Plus
Dper\GL21108-PA 639 GL21108-PA 456..637 19..196 194 28.4 Plus
Dper\GL25856-PA 177 GL25856-PA 75..177 19..120 182 34 Plus
Dper\GL20860-PA 340 GL20860-PA 49..272 78..312 176 25.1 Plus
Dper\GL20860-PA 340 GL20860-PA 59..320 29..296 174 24.4 Plus
Dper\GL11647-PA 185 GL11647-PA 61..185 7..129 171 31.2 Plus
Dper\GL25856-PA 177 GL25856-PA 15..161 18..168 149 26.3 Plus
Dper\GL25856-PA 177 GL25856-PA 6..121 200..315 146 30.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:54:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20717-PA 348 GA20717-PA 14..348 1..335 1785 99.1 Plus
Dpse\GA20717-PC 345 GA20717-PC 11..345 1..335 1784 99.1 Plus
Dpse\GA20717-PB 335 GA20717-PB 1..335 1..335 1781 99.1 Plus
Dpse\GA16481-PA 632 GA16481-PA 380..630 68..315 319 31.5 Plus
Dpse\GA16596-PA 177 GA16596-PA 1..176 127..311 238 30.9 Plus
Dpse\GA16481-PA 632 GA16481-PA 391..632 20..257 231 27.4 Plus
Dpse\GA16481-PA 632 GA16481-PA 449..630 19..196 194 28.4 Plus
Dpse\GA16596-PA 177 GA16596-PA 75..177 19..120 182 34 Plus
Dpse\GA16596-PA 177 GA16596-PA 15..161 18..168 149 26.3 Plus
Dpse\GA16596-PA 177 GA16596-PA 6..121 200..315 146 30.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:54:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23732-PA 348 GM23732-PA 14..348 1..335 1799 99.7 Plus
Dsec\GM17013-PA 581 GM17013-PA 347..579 68..315 346 32.5 Plus
Dsec\GM17013-PA 581 GM17013-PA 358..581 20..257 237 28 Plus
Dsec\GM13370-PA 209 GM13370-PA 37..209 132..313 234 31.1 Plus
Dsec\GM22049-PA 178 GM22049-PA 1..176 127..311 227 29.6 Plus
Dsec\GM23266-PA 178 GM23266-PA 1..176 127..311 227 29.6 Plus
Dsec\GM17013-PA 581 GM17013-PA 416..579 19..196 206 29.1 Plus
Dsec\GM13370-PA 209 GM13370-PA 106..208 19..120 198 36.9 Plus
Dsec\GM22049-PA 178 GM22049-PA 75..177 19..120 194 35.9 Plus
Dsec\GM23266-PA 178 GM23266-PA 75..177 19..120 194 35.9 Plus
Dsec\GM13370-PA 209 GM13370-PA 48..203 20..179 169 28 Plus
Dsec\GM22049-PA 178 GM22049-PA 6..121 200..315 158 31 Plus
Dsec\GM23266-PA 178 GM23266-PA 6..121 200..315 158 31 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:54:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18542-PA 348 GD18542-PA 14..348 1..335 1801 100 Plus
Dsim\GD21763-PA 678 GD21763-PA 416..676 19..315 315 28 Plus
Dsim\GD21763-PA 678 GD21763-PA 348..458 201..312 238 42 Plus
Dsim\GD21763-PA 678 GD21763-PA 348..530 133..324 236 33.2 Plus
Dsim\GD15732-PA 209 GD15732-PA 37..209 132..313 231 31.1 Plus
Dsim\GD17716-PA 178 GD17716-PA 1..176 127..311 227 29.6 Plus
Dsim\GD21644-PA 178 GD21644-PA 1..176 127..311 227 29.6 Plus
Dsim\GD21763-PA 678 GD21763-PA 347..513 68..248 201 28.6 Plus
Dsim\GD15732-PA 209 GD15732-PA 106..208 19..120 198 36.9 Plus
Dsim\GD17716-PA 178 GD17716-PA 75..177 19..120 194 35.9 Plus
Dsim\GD21644-PA 178 GD21644-PA 75..177 19..120 194 35.9 Plus
Dsim\GD15732-PA 209 GD15732-PA 48..203 20..179 170 28 Plus
Dsim\GD17716-PA 178 GD17716-PA 6..121 200..315 158 31 Plus
Dsim\GD21644-PA 178 GD21644-PA 6..121 200..315 158 31 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:54:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22568-PA 348 GJ22568-PA 14..348 1..335 1765 97.3 Plus
Dvir\GJ17978-PA 597 GJ17978-PA 363..595 68..315 347 32.5 Plus
Dvir\GJ19592-PA 181 GJ19592-PA 2..179 125..311 243 30.3 Plus
Dvir\GJ17978-PA 597 GJ17978-PA 374..597 20..257 234 27.6 Plus
Dvir\GJ18448-PA 1587 GJ18448-PA 1411..1585 67..251 209 29.6 Plus
Dvir\GJ17978-PA 597 GJ17978-PA 432..595 19..196 207 29.1 Plus
Dvir\GJ18448-PA 1587 GJ18448-PA 1412..1583 132..309 201 30 Plus
Dvir\GJ19592-PA 181 GJ19592-PA 78..180 19..120 191 35.9 Plus
Dvir\GJ12349-PA 335 GJ12349-PA 91..314 5..236 189 26.5 Plus
Dvir\GJ18448-PA 1587 GJ18448-PA 1425..1572 22..170 182 31.2 Plus
Dvir\GJ12349-PA 335 GJ12349-PA 44..267 78..312 179 25.1 Plus
Dvir\GJ12349-PA 335 GJ12349-PA 54..316 29..297 172 24.3 Plus
Dvir\GJ19592-PA 181 GJ19592-PA 9..122 200..313 157 33.3 Plus
Dvir\GJ19592-PA 181 GJ19592-PA 18..164 18..168 151 26.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:54:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13878-PA 348 GK13878-PA 14..348 1..335 1782 98.5 Plus
Dwil\GK22266-PA 169 GK22266-PA 20..169 161..310 722 88 Plus
Dwil\GK16085-PA 290 GK16085-PA 169..254 185..270 430 87.2 Plus
Dwil\GK23838-PA 630 GK23838-PA 373..628 68..315 313 30.9 Plus
Dwil\GK15192-PA 177 GK15192-PA 1..176 127..311 243 28.5 Plus
Dwil\GK23838-PA 630 GK23838-PA 374..547 133..316 230 33.7 Plus
Dwil\GK23838-PA 630 GK23838-PA 384..630 20..257 225 26.9 Plus
Dwil\GK15192-PA 177 GK15192-PA 66..177 11..120 169 33 Plus
Dwil\GK15192-PA 177 GK15192-PA 15..175 18..181 156 28.3 Plus
Dwil\GK22266-PA 169 GK22266-PA 69..154 19..104 149 34.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:54:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25876-PA 348 GE25876-PA 14..347 1..334 1791 99.7 Plus
Dyak\GE12653-PA 581 GE12653-PA 347..579 68..315 346 32.5 Plus
Dyak\GE15647-PA 179 GE15647-PA 7..177 132..311 256 32.6 Plus
Dyak\GE12653-PA 581 GE12653-PA 358..581 20..257 237 28 Plus
Dyak\GE12993-PA 178 GE12993-PA 1..176 127..311 232 30.1 Plus
Dyak\GE14355-PA 187 GE14355-PA 5..184 132..319 223 28.9 Plus
Dyak\GE12653-PA 581 GE12653-PA 416..579 19..196 206 29.1 Plus
Dyak\GE12993-PA 178 GE12993-PA 75..177 19..120 189 35 Plus
Dyak\GE15647-PA 179 GE15647-PA 76..179 19..121 186 35.6 Plus
Dyak\GE15647-PA 179 GE15647-PA 5..122 198..315 166 30.5 Plus
Dyak\GE14355-PA 187 GE14355-PA 61..175 7..120 153 28.7 Plus
Dyak\GE15647-PA 179 GE15647-PA 1..173 1..179 152 25.6 Plus
Dyak\GE12993-PA 178 GE12993-PA 6..121 200..315 144 29.3 Plus

LD39308.hyp Sequence

Translation from 1453 to 2460

> LD39308.hyp
MSLGAMHCTRCADGFEPTEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYE
FEGRKYCERDFHVLFAPCCNKCGEFVIGRVIKAMSASWHPQCFRCQLCAK
ELADCGFIKNQNRALCHECNAKVKAEITGRYVCQKCHGLIDEEPLRFRGE
VYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGIPI
CGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCET
HYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCDTKMTQKSKFY
EYDEKPVCKKCYDRFPNELRRRLRTAHEMTMKKNT*

LD39308.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:05:15
Subject Length Description Subject Range Query Range Score Percent Strand
stck-PD 335 CG7954-PD 1..335 1..335 1920 100 Plus
stck-PA 335 CG7954-PA 1..335 1..335 1920 100 Plus
stck-PB 345 CG7954-PB 11..345 1..335 1920 100 Plus
stck-PC 348 CG7954-PC 14..348 1..335 1920 100 Plus
Pax-PB 556 CG31794-PB 322..553 68..314 400 32.7 Plus