BDGP Sequence Production Resources |
Search the DGRC for LD39332
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 393 |
Well: | 32 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1518-RA |
Protein status: | LD39332.pep: gold |
Sequenced Size: | 2494 |
Gene | Date | Evidence |
---|---|---|
CG1518 | 2008-04-29 | Picked prior to 5.5 |
CG1518 | 2008-08-15 | Release 5.9 accounting |
CG1518 | 2008-12-18 | 5.12 accounting |
2494 bp assembled on 2008-05-22
GenBank Submission: BT032845
> LD39332.complete AGCCGGCAGGCGGAAGAGCAAGGAAAATGACGCTGGACGTGGGCGGCGTC GCCAGGGGACTGCTCACCTGGGACAAACAGGAGCACCTGGTCAAGCTGGC CATTCTCATCCTGGCAGCGGTTTTATCATTTGCCACACGCTTGTTCTCTG TGCTGCGATTCGAAAGCGTAATCCATGAGTTCGATCCGTACTTCAACTAC CGCACCACGCGGTTTCTGGCGGAGCAGGGCTTTTACAAGTTCCACAACTG GTTCGATGACCGCGCCTGGTATCCCCTGGGCCGCATCATCGGCGGCACCA TCTATCCCGGGCTGATGCTCACCTCGGCGGCCCTGTACCGCCTGATGTGG CTGCTCAATGTGACCATCGACATACGGAACGTGTGCGTCTTCCTGGCGCC CTTCTTCTCCTCGCTGACCACGCTGGTGACCTACGCCCTCACAAAGGAGA TACACAGCACTGGAGCTGGACTGGTGGCCGCCGCTTTGATATCCATCGTT CCCGGGTATATCTCTCGATCCGTGGCGGGATCGTACGACAATGAAGGCAT CGCCATTTTCTGCATGCTCTTCACCTACTATTTGTGGATCAAGGCGGTAA AGACGGGCACGATCTTTTGGTCGGCTATGTCGGCATTGGCCTACTTCTAT ATGGTCTCCTCGTGGGGTGGCTATGTCTTCCTGATTAACCTAATCCCGCT GCACGTGCTGGCGCTGATGATCACCGGACGTTTCTCGCACAGGATCTACA TAGCATACAGCACGCTATACTGCGTCGGCACCATTCTGTCGATGCAGATC TCGTTTGTGGGATTCCAACCCATCCAGAGCTCCGAACACATGCTGGCACT GGGAACCTTTGGCCTGTGCCAGATTCACGCTTTCGTCGACTATCTGCGCT CGCGCATTCCCAAGGATCACTTCGATCTGCTCTTCAAGACGTTGGTTTCC AGTGTTTTGACTGTGGTGTTCGTCGTGGGTACCCTGCTCACGCTTACCGG GAAAGTCTCCCCCTGGACCGGCAGATTTTACTCGCTACTAGATCCATCCT ATGCCAAGAATCACATTCCAATCATCGCCTCCGTATCGGAGCATCAGCCT ACATCCTGGTCGTCTTTCTATTTTGATCTGCAGATCCTGGTCTTCCTCTT TCCCGCTGGCCTTTATTTCTGCTTTTCCAAGCTGACGGACTCGAACATCT TTATTATTTTGTATGGCGTCACCAGTATTTATTTCGCCGGAGTGATGGTG CGTCTAATGCTGGTCCTGGCGCCCGTGATGTGTGTGCTATCCGGAATTGC CATTTCGCATCTGCTGGCCAAGTATATCAAGAGCGTTGATGCCGGAAGCT CATCGAAGCAGGGAGTAGAAAGCAAGCGGCAGCACAAGAAGCTGGAACAG CAGACGGGAGGCGTGAAGAGCGAGGTGGCCATTGGATTCGTGGGTGTCAT CACTCTGATGCTTATAGTGTACACGCTGCACTGCACCTGGGTCACCTCGG AGGCCTACTCCTCGCCCAGTATTGTGTTGAGTGCCAGGTCGCACGATGGC GGCCGCATCATTTTCGATGACTTCCGCGAGGCCTACTACTGGCTGCAGAT GAACACTCCGGAGGACGCTCGCATAATGTCCTGGTGGGACTACGGCTACC AGATAACGGCCATGGCCAATCGGACGATATTGGTGGATAACAATACTTGG AACAACACACATATATCGCGCGTTGGCCAGGCGATGGCCTCTTCGGAGGA GAAAGCCTACGAGATAATGAGGGAACTGGATGTGGACTACGTTCTCGTGA TTTTCGGAGGGCTCACTGGCTACTCATCGGACGATATCAACAAGTTCCTG TGGATGGTGCGCATTGGCGGCAGCACGGATCGTGGTGCGCACATCCGCGA AAAGGACTACTATGCGGCCAACGGAGAGTTCCGAGTGGACAAGGAGGGCT CACCCACACTGCTCAATTGTTTGATGTACAAGATGTGCTACTATCGCTTT GGGCAAATGTACACGGAAGGTGGCAAAGCCCAGGGCTACGATCGAGTTCG TGCCGCCGAGATCGGCAACAAGGACTTTGAACTGGATGTCATGGAGGAGG CGTACACCACGGAGCACTGGCTGGTGCGCATCTACAAGGTTAAGGATCTG CCGAATCGTGGAGTCTGAGAAATAAGTGTCGCAGTCATTCCGCTCTATTC TGTGTTCTGTACATTAGCTAACTCTGCCCGTCTCCCTCTATCTCGAATAT TTGGCAATCTCTCTCGCTCTATGAGCACCAATTGCTGCATTCTCCTGCTT TGCCCATCATGCATTTAGTTCTACACTGGCACAAAACCACAAAAACCAAG TATTTTTTTTGTTTTTATATTTTTACAAATGTCTCAAGTGTACCAGATGC GTCTGGCTTCTTAAGCAAGAAAGGAGCATGTAAGCGAATCGAACGAAATA TATATATGTGGAGAAAAACTATCATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1518-RA | 2971 | CG1518-RA | 381..2857 | 1..2477 | 12385 | 100 | Plus |
CG1518.a | 2567 | CG1518.a | 1221..2567 | 1129..2475 | 6720 | 99.9 | Plus |
CG1518.a | 2567 | CG1518.a | 381..1225 | 1..845 | 4225 | 100 | Plus |
OstStt3-RA | 2833 | OstStt3-RA | 1788..2036 | 1553..1801 | 330 | 75.5 | Plus |
OstStt3-RA | 2833 | OstStt3-RA | 1215..1307 | 1049..1141 | 210 | 81.7 | Plus |
OstStt3-RA | 2833 | OstStt3-RA | 400..483 | 234..317 | 195 | 82.1 | Plus |
OstStt3-RA | 2833 | OstStt3-RA | 802..872 | 636..706 | 160 | 81.6 | Plus |
OstStt3-RA | 2833 | OstStt3-RA | 2068..2101 | 1833..1866 | 140 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20915121..20915984 | 2475..1612 | 4320 | 100 | Minus |
chrX | 22417052 | chrX | 20916282..20916767 | 1614..1129 | 2430 | 100 | Minus |
chrX | 22417052 | chrX | 20917566..20917956 | 846..456 | 1955 | 100 | Minus |
chrX | 22417052 | chrX | 20918055..20918383 | 455..127 | 1645 | 100 | Minus |
chrX | 22417052 | chrX | 20917073..20917365 | 1133..841 | 1450 | 99.7 | Minus |
chrX | 22417052 | chrX | 20918768..20918893 | 126..1 | 630 | 100 | Minus |
chr3R | 27901430 | chr3R | 20890711..20891024 | 1866..1553 | 400 | 75.2 | Minus |
chr3R | 27901430 | chr3R | 20892445..20892591 | 317..171 | 225 | 76.9 | Minus |
chr3R | 27901430 | chr3R | 20891621..20891713 | 1141..1049 | 210 | 81.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 21049962..21050827 | 2477..1612 | 4330 | 100 | Minus |
X | 23542271 | X | 21051125..21051610 | 1614..1129 | 2430 | 100 | Minus |
X | 23542271 | X | 21052409..21052799 | 846..456 | 1955 | 100 | Minus |
X | 23542271 | X | 21052898..21053226 | 455..127 | 1645 | 100 | Minus |
X | 23542271 | X | 21051916..21052208 | 1133..841 | 1450 | 99.7 | Minus |
X | 23542271 | X | 21053611..21053736 | 126..1 | 630 | 100 | Minus |
3R | 32079331 | 3R | 25067539..25067852 | 1866..1553 | 415 | 75.5 | Minus |
3R | 32079331 | 3R | 25069273..25069419 | 317..171 | 225 | 76.9 | Minus |
3R | 32079331 | 3R | 25068449..25068541 | 1141..1049 | 210 | 81.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 21035054..21035919 | 2477..1612 | 4330 | 100 | Minus |
X | 23527363 | X | 21036217..21036702 | 1614..1129 | 2430 | 100 | Minus |
X | 23527363 | X | 21037501..21037891 | 846..456 | 1955 | 100 | Minus |
X | 23527363 | X | 21037990..21038318 | 455..127 | 1645 | 100 | Minus |
X | 23527363 | X | 21037008..21037300 | 1133..841 | 1450 | 99.6 | Minus |
X | 23527363 | X | 21038703..21038828 | 126..1 | 630 | 100 | Minus |
3R | 31820162 | 3R | 24808435..24808683 | 1801..1553 | 330 | 75.5 | Minus |
3R | 31820162 | 3R | 24809280..24809372 | 1141..1049 | 210 | 81.7 | Minus |
3R | 31820162 | 3R | 24810104..24810187 | 317..234 | 195 | 82.1 | Minus |
3R | 31820162 | 3R | 24809715..24809785 | 706..636 | 160 | 81.6 | Minus |
3R | 31820162 | 3R | 24808370..24808403 | 1866..1833 | 140 | 94.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20915121..20915982 | 1614..2475 | 100 | <- | Minus |
chrX | 20916283..20916762 | 1134..1613 | 100 | <- | Minus |
chrX | 20917073..20917360 | 846..1133 | 100 | <- | Minus |
chrX | 20917567..20917956 | 456..845 | 100 | <- | Minus |
chrX | 20918055..20918383 | 127..455 | 100 | <- | Minus |
chrX | 20918768..20918893 | 1..126 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1518-RA | 1..2142 | 27..2168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1518-RA | 1..2142 | 27..2168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1518-RA | 1..2142 | 27..2168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1518-RA | 1..2142 | 27..2168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1518-RA | 1..2142 | 27..2168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1518-RA | 381..2855 | 1..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1518-RA | 381..2855 | 1..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1518-RA | 202..2676 | 1..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1518-RA | 381..2855 | 1..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1518-RA | 202..2676 | 1..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21053611..21053736 | 1..126 | 100 | Minus | |
X | 21049964..21050825 | 1614..2475 | 100 | <- | Minus |
X | 21051126..21051605 | 1134..1613 | 100 | <- | Minus |
X | 21051916..21052203 | 846..1133 | 100 | <- | Minus |
X | 21052410..21052799 | 456..845 | 100 | <- | Minus |
X | 21052898..21053226 | 127..455 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21053611..21053736 | 1..126 | 100 | Minus | |
X | 21049964..21050825 | 1614..2475 | 100 | <- | Minus |
X | 21051126..21051605 | 1134..1613 | 100 | <- | Minus |
X | 21051916..21052203 | 846..1133 | 100 | <- | Minus |
X | 21052410..21052799 | 456..845 | 100 | <- | Minus |
X | 21052898..21053226 | 127..455 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21053611..21053736 | 1..126 | 100 | Minus | |
X | 21049964..21050825 | 1614..2475 | 100 | <- | Minus |
X | 21051126..21051605 | 1134..1613 | 100 | <- | Minus |
X | 21051916..21052203 | 846..1133 | 100 | <- | Minus |
X | 21052410..21052799 | 456..845 | 100 | <- | Minus |
X | 21052898..21053226 | 127..455 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20920991..20921852 | 1614..2475 | 100 | <- | Minus |
arm_X | 20922153..20922632 | 1134..1613 | 100 | <- | Minus |
arm_X | 20922943..20923230 | 846..1133 | 100 | <- | Minus |
arm_X | 20923437..20923826 | 456..845 | 100 | <- | Minus |
arm_X | 20923925..20924253 | 127..455 | 100 | <- | Minus |
arm_X | 20924638..20924763 | 1..126 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 21037990..21038318 | 127..455 | 100 | <- | Minus |
X | 21037502..21037891 | 456..845 | 100 | <- | Minus |
X | 21038703..21038828 | 1..126 | 100 | Minus | |
X | 21035056..21035917 | 1614..2475 | 100 | <- | Minus |
X | 21036218..21036697 | 1134..1613 | 100 | <- | Minus |
X | 21037008..21037295 | 846..1133 | 100 | <- | Minus |
Translation from 2 to 2167
> LD39332.pep PAGGRARKMTLDVGGVARGLLTWDKQEHLVKLAILILAAVLSFATRLFSV LRFESVIHEFDPYFNYRTTRFLAEQGFYKFHNWFDDRAWYPLGRIIGGTI YPGLMLTSAALYRLMWLLNVTIDIRNVCVFLAPFFSSLTTLVTYALTKEI HSTGAGLVAAALISIVPGYISRSVAGSYDNEGIAIFCMLFTYYLWIKAVK TGTIFWSAMSALAYFYMVSSWGGYVFLINLIPLHVLALMITGRFSHRIYI AYSTLYCVGTILSMQISFVGFQPIQSSEHMLALGTFGLCQIHAFVDYLRS RIPKDHFDLLFKTLVSSVLTVVFVVGTLLTLTGKVSPWTGRFYSLLDPSY AKNHIPIIASVSEHQPTSWSSFYFDLQILVFLFPAGLYFCFSKLTDSNIF IILYGVTSIYFAGVMVRLMLVLAPVMCVLSGIAISHLLAKYIKSVDAGSS SKQGVESKRQHKKLEQQTGGVKSEVAIGFVGVITLMLIVYTLHCTWVTSE AYSSPSIVLSARSHDGGRIIFDDFREAYYWLQMNTPEDARIMSWWDYGYQ ITAMANRTILVDNNTWNNTHISRVGQAMASSEEKAYEIMRELDVDYVLVI FGGLTGYSSDDINKFLWMVRIGGSTDRGAHIREKDYYAANGEFRVDKEGS PTLLNCLMYKMCYYRFGQMYTEGGKAQGYDRVRAAEIGNKDFELDVMEEA YTTEHWLVRIYKVKDLPNRGV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21857-PA | 713 | GF21857-PA | 1..713 | 9..721 | 3713 | 96.9 | Plus |
Dana\GF17105-PA | 774 | GF17105-PA | 18..725 | 29..714 | 2219 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17558-PA | 713 | GG17558-PA | 1..713 | 9..721 | 3796 | 99.7 | Plus |
Dere\GG12291-PA | 774 | GG12291-PA | 18..725 | 29..714 | 2214 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12900-PA | 719 | GH12900-PA | 1..719 | 9..721 | 3645 | 94.6 | Plus |
Dgri\GH19585-PA | 774 | GH19585-PA | 18..725 | 29..714 | 2193 | 57.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stt3A-PC | 713 | CG1518-PC | 1..713 | 9..721 | 3724 | 100 | Plus |
Stt3A-PA | 713 | CG1518-PA | 1..713 | 9..721 | 3724 | 100 | Plus |
Stt3B-PA | 774 | CG7748-PA | 18..725 | 29..714 | 2202 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14454-PA | 719 | GI14454-PA | 1..719 | 9..721 | 3635 | 93.6 | Plus |
Dmoj\GI23816-PA | 774 | GI23816-PA | 18..725 | 29..714 | 2203 | 58.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21896-PA | 774 | GL21896-PA | 18..725 | 29..714 | 2212 | 58.3 | Plus |
Dper\GL16584-PA | 672 | GL16584-PA | 214..672 | 262..721 | 2200 | 92.8 | Plus |
Dper\GL16584-PA | 672 | GL16584-PA | 37..217 | 17..197 | 914 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22298-PA | 720 | GA22298-PA | 17..720 | 17..721 | 3610 | 96.2 | Plus |
Dpse\GA22539-PA | 774 | GA22539-PA | 18..725 | 29..714 | 2210 | 58.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22642-PA | 713 | GM22642-PA | 1..713 | 9..721 | 3776 | 99.2 | Plus |
Dsec\GM17756-PA | 774 | GM17756-PA | 18..725 | 29..714 | 2214 | 58.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24643-PA | 511 | GD24643-PA | 1..506 | 9..537 | 2562 | 94.2 | Plus |
Dsim\GD18237-PA | 742 | GD18237-PA | 18..705 | 29..714 | 2093 | 56.1 | Plus |
Dsim\GD13502-PA | 143 | GD13502-PA | 15..143 | 593..721 | 695 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18789-PA | 719 | GJ18789-PA | 1..719 | 9..721 | 3650 | 94.7 | Plus |
Dvir\GJ23594-PA | 774 | GJ23594-PA | 18..725 | 29..714 | 2184 | 57.3 | Plus |
Translation from 2 to 2167
> LD39332.hyp PAGGRARKMTLDVGGVARGLLTWDKQEHLVKLAILILAAVLSFATRLFSV LRFESVIHEFDPYFNYRTTRFLAEQGFYKFHNWFDDRAWYPLGRIIGGTI YPGLMLTSAALYRLMWLLNVTIDIRNVCVFLAPFFSSLTTLVTYALTKEI HSTGAGLVAAALISIVPGYISRSVAGSYDNEGIAIFCMLFTYYLWIKAVK TGTIFWSAMSALAYFYMVSSWGGYVFLINLIPLHVLALMITGRFSHRIYI AYSTLYCVGTILSMQISFVGFQPIQSSEHMLALGTFGLCQIHAFVDYLRS RIPKDHFDLLFKTLVSSVLTVVFVVGTLLTLTGKVSPWTGRFYSLLDPSY AKNHIPIIASVSEHQPTSWSSFYFDLQILVFLFPAGLYFCFSKLTDSNIF IILYGVTSIYFAGVMVRLMLVLAPVMCVLSGIAISHLLAKYIKSVDAGSS SKQGVESKRQHKKLEQQTGGVKSEVAIGFVGVITLMLIVYTLHCTWVTSE AYSSPSIVLSARSHDGGRIIFDDFREAYYWLQMNTPEDARIMSWWDYGYQ ITAMANRTILVDNNTWNNTHISRVGQAMASSEEKAYEIMRELDVDYVLVI FGGLTGYSSDDINKFLWMVRIGGSTDRGAHIREKDYYAANGEFRVDKEGS PTLLNCLMYKMCYYRFGQMYTEGGKAQGYDRVRAAEIGNKDFELDVMEEA YTTEHWLVRIYKVKDLPNRGV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1518-PC | 713 | CG1518-PC | 1..713 | 9..721 | 3724 | 100 | Plus |
CG1518-PA | 713 | CG1518-PA | 1..713 | 9..721 | 3724 | 100 | Plus |
OstStt3-PA | 774 | CG7748-PA | 18..725 | 29..714 | 2202 | 58.1 | Plus |