BDGP Sequence Production Resources |
Search the DGRC for LD39460
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 394 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7544-RA |
Protein status: | LD39460.pep: gold |
Preliminary Size: | 1850 |
Sequenced Size: | 1528 |
Gene | Date | Evidence |
---|---|---|
CG7544 | 2001-01-01 | Release 2 assignment |
CG7544 | 2001-09-19 | Blastp of sequenced clone |
CG7544 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7544 | 2008-04-29 | Release 5.5 accounting |
CG7544 | 2008-08-15 | Release 5.9 accounting |
CG7544 | 2008-12-18 | 5.12 accounting |
1528 bp (1528 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058680
> LD39460.complete TAACAATTGCGATTTTTTGAAAACGAAATATGGTAAAAACTAAGGGAAAC CAAAAGATAGTCGGCATGCATCCACGTAATGTGTTACGCACGCAGCCCGA CTATACCAAAATGGCTATAAAATACAAAGATTTTCGGCAGCAGTGCCAGT TGGAGCTCAATGGCAAGGTTTCTGTGAACTTTCGCAATGAAAAGACCCTT CGTGAGTTGACCAAAATGCTGTTGAAGGAATATTACGATTTAGATGTGGA TTTTGCACCCGGAAGTTTGGTGCCCACATTAGCACTACGTTTGAATTACA TTTTGTGGTTGGAGGATCTAATGGAACCTCTAAATTTGCAGAACATACGT GGTATAGATATAGGCTGCGGCTCCTCCTGCATTTATTCACTCCTTGGGGC CAAGAAAAATGGTTGGCACATGTTGGCTTTGGAATCGAAACCGCAAAACA TAGAATACGCCAAGGAGAATGTAAAGAGAAATCACATGGAAAGCCTTATA GAAGTCTATGCTCAACCAGACAACACGAACATCTTTAAGAGCTATTTTGA GCAGGATCAGCAACAGTTGCAGTATCAATTTTGCCTGTGCAATCCACCCT TCTTCGACTCGAACTTACCAAATCCCTTAGGCGGCAATACCAGGAATCCA GAGAGACGACCAGCACCCAATAATGCCAGAACTGGAAGCCAGGAGGAACT CACCTGCGTGGGTGGCGAGGTACAGTTTGTGCAACGCATTATAGACGAGA GTCTGGAGAACAAGGAGCGTGTGCGAATCTTCACCACGATGCTGGGCGTC AAGGCCAACGTTCCAAGAATACTGGATTACCTCAAGGAGCTGCAGGTGGC GAATGTCAGCACCACTGAATTCCATCAGGGACACACGACTCGGTGGGCGG TGGCCTGGAGCTTCCACTCGGAGCCACTACAGCAGGGGACAACATAAAAT TAAGTTACCATTAGCTCTGTTTTAATGTATAAGTTCTTGGAGAATTGCTG CAACTTTCGAATGTACTGTGACCTTCACCTGTGCTCATCCCAAAAAGCAA CTCCAAGGCACCTAGAAAGCTTTCGCCTTAAATGGAAATTTGCATGTCAA CGGTCACTTTGCCACCCAGCTCCACGAACGGAAATTATCGTTTCGCTTTT ATCATTGACCACAGCTGACCACACACTTCGACGGAAAAAGGCAAACGGAG TCGAAATGGCAACCGAAATGGAGGCAAACACGCTCACTAAGCACAAGTTG CCGCCGCTGGTCAACACACCGACGTTTCCACACCTTTGAGCCGGGGAATT TGGGCGTTTCGCTTGGCCACCATGTGGGATAGCGAATAGCAAATTTTAAT TGCTGCACAGGCAGGTTCCTGGTTTGCTAATTATTCGACACGAAAATACC TTTCAATGCAGGGAGAGTATATTAAAAGGGAAATCAATGGCTCTTACAGA TAGATAGATACTAAGTTGAAAGTGTAATATAATAAAATTGTATACATTCT TAGTCAGTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7544-RA | 1568 | CG7544-RA | 61..1568 | 1..1508 | 7540 | 100 | Plus |
CG7544.a | 1635 | CG7544.a | 61..1029 | 1..969 | 4845 | 100 | Plus |
CG7544-RB | 1343 | CG7544-RB | 61..1029 | 1..969 | 4845 | 100 | Plus |
CG7544.a | 1635 | CG7544.a | 1122..1635 | 969..1482 | 2570 | 100 | Plus |
CG7544-RB | 1343 | CG7544-RB | 1122..1343 | 969..1190 | 1110 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11036371..11036910 | 969..1508 | 2685 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 11035611..11036024 | 362..775 | 2055 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 11035350..11035562 | 152..364 | 1065 | 100 | Plus |
chr2R | 21145070 | chr2R | 11036084..11036278 | 775..969 | 975 | 100 | Plus |
chr2R | 21145070 | chr2R | 11035138..11035290 | 1..153 | 705 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 15149170..15149711 | 969..1510 | 2710 | 100 | Plus |
2R | 25286936 | 2R | 15148410..15148823 | 362..775 | 2070 | 100 | Plus |
2R | 25286936 | 2R | 15148149..15148361 | 152..364 | 1065 | 100 | Plus |
2R | 25286936 | 2R | 15148883..15149077 | 775..969 | 975 | 100 | Plus |
2R | 25286936 | 2R | 15147937..15148089 | 1..153 | 765 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 15150369..15150910 | 969..1510 | 2710 | 100 | Plus |
2R | 25260384 | 2R | 15149609..15150022 | 362..775 | 2070 | 100 | Plus |
2R | 25260384 | 2R | 15149348..15149560 | 152..364 | 1065 | 100 | Plus |
2R | 25260384 | 2R | 15150082..15150276 | 775..969 | 975 | 100 | Plus |
2R | 25260384 | 2R | 15149136..15149288 | 1..153 | 765 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11035138..11035289 | 1..152 | 97 | -> | Plus |
chr2R | 11035351..11035561 | 153..363 | 100 | -> | Plus |
chr2R | 11035613..11036024 | 364..775 | 99 | -> | Plus |
chr2R | 11036085..11036278 | 776..969 | 100 | -> | Plus |
chr2R | 11036372..11036910 | 970..1508 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7544-RB | 1..918 | 30..947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7544-RB | 1..918 | 30..947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7544-RA | 1..918 | 30..947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7544-RA | 1..918 | 30..947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7544-RA | 1..918 | 30..947 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7544-RA | 61..1568 | 1..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7544-RA | 61..1568 | 1..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7544-RA | 78..1585 | 1..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7544-RA | 61..1568 | 1..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7544-RA | 78..1585 | 1..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15147937..15148088 | 1..152 | 100 | -> | Plus |
2R | 15148150..15148360 | 153..363 | 100 | -> | Plus |
2R | 15148412..15148823 | 364..775 | 100 | -> | Plus |
2R | 15148884..15149077 | 776..969 | 100 | -> | Plus |
2R | 15149171..15149709 | 970..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15147937..15148088 | 1..152 | 100 | -> | Plus |
2R | 15148150..15148360 | 153..363 | 100 | -> | Plus |
2R | 15148412..15148823 | 364..775 | 100 | -> | Plus |
2R | 15148884..15149077 | 776..969 | 100 | -> | Plus |
2R | 15149171..15149709 | 970..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15147937..15148088 | 1..152 | 100 | -> | Plus |
2R | 15148150..15148360 | 153..363 | 100 | -> | Plus |
2R | 15148412..15148823 | 364..775 | 100 | -> | Plus |
2R | 15148884..15149077 | 776..969 | 100 | -> | Plus |
2R | 15149171..15149709 | 970..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11035442..11035593 | 1..152 | 100 | -> | Plus |
arm_2R | 11035655..11035865 | 153..363 | 100 | -> | Plus |
arm_2R | 11035917..11036328 | 364..775 | 100 | -> | Plus |
arm_2R | 11036389..11036582 | 776..969 | 100 | -> | Plus |
arm_2R | 11036676..11037214 | 970..1508 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15149349..15149559 | 153..363 | 100 | -> | Plus |
2R | 15149611..15150022 | 364..775 | 100 | -> | Plus |
2R | 15150083..15150276 | 776..969 | 100 | -> | Plus |
2R | 15150370..15150908 | 970..1508 | 100 | Plus | |
2R | 15149136..15149287 | 1..152 | 100 | -> | Plus |
Translation from 29 to 946
> LD39460.pep MVKTKGNQKIVGMHPRNVLRTQPDYTKMAIKYKDFRQQCQLELNGKVSVN FRNEKTLRELTKMLLKEYYDLDVDFAPGSLVPTLALRLNYILWLEDLMEP LNLQNIRGIDIGCGSSCIYSLLGAKKNGWHMLALESKPQNIEYAKENVKR NHMESLIEVYAQPDNTNIFKSYFEQDQQQLQYQFCLCNPPFFDSNLPNPL GGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDESLENKERVRI FTTMLGVKANVPRILDYLKELQVANVSTTEFHQGHTTRWAVAWSFHSEPL QQGTT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12312-PA | 308 | GF12312-PA | 1..306 | 1..305 | 1358 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20499-PA | 305 | GG20499-PA | 1..305 | 1..305 | 1538 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21111-PA | 302 | GH21111-PA | 2..294 | 4..294 | 1196 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7544-PB | 305 | CG7544-PB | 1..305 | 1..305 | 1618 | 100 | Plus |
CG7544-PA | 305 | CG7544-PA | 1..305 | 1..305 | 1618 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18716-PA | 306 | GI18716-PA | 4..305 | 5..305 | 1219 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10611-PA | 300 | GL10611-PA | 5..297 | 12..304 | 1280 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20428-PA | 305 | GA20428-PA | 1..302 | 1..304 | 1294 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21591-PA | 307 | GM21591-PA | 1..305 | 1..305 | 1603 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11099-PA | 307 | GD11099-PA | 1..305 | 1..305 | 1616 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21733-PA | 314 | GJ21733-PA | 2..301 | 4..301 | 1229 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19702-PA | 296 | GK19702-PA | 1..293 | 1..296 | 1183 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13632-PA | 305 | GE13632-PA | 1..305 | 1..305 | 1559 | 93.1 | Plus |
Translation from 29 to 946
> LD39460.hyp MVKTKGNQKIVGMHPRNVLRTQPDYTKMAIKYKDFRQQCQLELNGKVSVN FRNEKTLRELTKMLLKEYYDLDVDFAPGSLVPTLALRLNYILWLEDLMEP LNLQNIRGIDIGCGSSCIYSLLGAKKNGWHMLALESKPQNIEYAKENVKR NHMESLIEVYAQPDNTNIFKSYFEQDQQQLQYQFCLCNPPFFDSNLPNPL GGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDESLENKERVRI FTTMLGVKANVPRILDYLKELQVANVSTTEFHQGHTTRWAVAWSFHSEPL QQGTT*