Clone LD39519 Report

Search the DGRC for LD39519

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:395
Well:19
Vector:pOT2
Associated Gene/TranscriptPitslre-RA
Protein status:LD39519.pep: gold
Preliminary Size:3135
Sequenced Size:3270

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4268 2003-01-01 Sim4 clustering to Release 3
CG4268 2004-10-02 Blastp of sequenced clone
Pitslre 2008-04-29 Release 5.5 accounting
Pitslre 2008-08-15 Release 5.9 accounting
Pitslre 2008-12-18 5.12 accounting

Clone Sequence Records

LD39519.complete Sequence

3270 bp assembled on 2006-11-09

GenBank Submission: BT016092

> LD39519.complete
CACGCTGAATTTCACATTTCCACCACAAGAAAAAAGAAGAGAAGAAAGAA
ACGCAGACGACCTTTTGCTGAAGTGCGTGAGATACCACCGAAAAAACGAA
CCAAATCAATTAAATGCTGATTAACCGCCAGCCAAACGATTGAAAACAAC
GGTAGCCAGGCGAACGCCGCAGAAACCTGCCAACAATTACGTGAACCAAC
GCAAGGGCACCCGTGCAATTGGCATTTTAATTGGCGACTTTAGCTGCGAA
CGGCGCGCCGAAAATGGTCAATTCGTCTGGCAGCGAGGATGGCCAGTTGC
GGAGCCCCAACGATGTGCACTATCACAGCCGAGGCGAGGAGGATGAGCAC
GAGGGCGACGCTGATGCCTTGTACATTCAACCACCGCAGGCCAGCCGAGA
ATCAGGATCCGGTCCCAGGCGCGAGAAGAAGAAACATTCCCGCGAGCGTC
GACGCCACAAGGAGCGTGATGACGTAGGCGGTGCTGCACTAGCACTAGAA
CGGGATCATCGATATGACTATCGGAGCCGGGAGGAGCACTACCACCACCA
CCAACGCGAACGGAGCAGCAATGCGGCTGCAGCCTATGCGAAACACCACC
TGGGCCATGCCTACCATTACCCTCAGCCGCCTCAACAGCAGCAACAGCCT
CTACCGCCGGCGCCCAGCTATGCTGCCCACCATTATCATCATCACCAGCA
TTTAAGTGGAGCTCGAGCTGCTCCCCGCGAATACCATTCCTATCCATCGG
GCTACCATTCGGGCAGTCGACACGGCGACTACCCAATGGAGGAGCCAACG
CGACGCAGCAGTAAGTACGCGGAGAGCAAGGATGCTGAGAGCCTGGAACA
GGATCTGCGATCGAGGTTGCTGAAAAAGCGCCATAACTACGTTAAGGATT
ATGAAACGGAGGAGAACTATGAGCATCGGGTCGAGAGAAGTGATCGCCGG
GAGGGAGGACGCAAAGAGCGGGAGAGAACTGTGCGAAGTACCCACAAGCA
AAACCGTCACGACCGAGTCATTGAGCTGCTGGACAGTCCTGAGCAGGAGC
ACCACCATCAGCACCAGCACAAATCGCATCGCAGCAAGTGGCGCGAGGAG
GTTGAGGTTATCAGACGAAAGGTGCCCGAGGACTTGGAGCTGTTGGCTCG
CAGGGAAAAACTTCTTGCCGCTGAACGGGAAAGCCGCCAGCGAAAACAGA
CGGCTCGTGAGGAACTGGAAGCTCGGCGGGAGTTGCTCCGCGAGCGAAAC
GAGCACAGTGATGCACTTAGTCCAACAACAGTGGCTGCAAGTGTAACCGC
AGGTCTGAACATTCATGTGAAGAGGAAGTCCAAGCCGGATAACTATGAGA
AGGAAATCAAACTCAAGAAGCGGCGGGAAGATGATATCGAGGTTATCCGA
GATGATGACGATGAGGAAAGCGAGGAGAGCGACTCAAACGAGGAGGTTCC
TGAGCAAGACAGCGAAGGAAGCGCAACAGAGTCTGGAAGCGAAGACAGCT
ATGCTAGCAAAAAGAAGAGCAAGATTAAATCCAAGTCTCAATTGGAAGAC
GATGACGAGGATTTACCCTTACCCGACAGTCCACTTAGCGTGGGTGAGCT
ATACAAGTCGCCCAAGCAACGTCAGCGATCTCGCTCTGTAAGCTCCAAGA
GCAGCTCCCAGTCCAGTCGAAGCAGTCGGTCCAGATCCCGTTCTAGAAGT
CAAAGCAGCCTAGAGGATGAGGTAGATCGTCAAGACGTGGGGGCAGATGC
CTCACCCAGCAGCAGCACACGCAGCGAGGAACGTGGAATGACCCAAGAGC
AGCCGGAAGAGAAGCCCGAGGAGAAACTCAAAGAGAAACAGAAGTCTCTG
GAGGAGCAAATTCCGTGCGATGACAAGGGCATTCCCCTGCCCAACTATTA
TCCCGGTGTGCAGGGCTGCCGGTCTGTGGAGGAATTCCAGTGTCTAAACC
GCATCGAAGAGGGAACCTATGGAGTGGTATATCGAGCCAAGGACAAAAGA
ACCAATGAGATTGTGGCTCTTAAGCGTCTGAAAATGGAGAAGGAAAAGGA
GGGATTTCCGATAACATCACTCAGGGAGATCAACACTCTTCTCAAGGGTC
AGCACCCGAATATTGTGACCGTTCGCGAGATCGTGGTCGGATCCAACATG
GATAAGATATTTATTGTGATGGACTATGTAGAACACGACCTGAAATCCCT
GATGGAAACGATGAAAAATCGTAAGCAGAGCTTTTTCCCCGGAGAAGTCA
AATGTCTGACGCAGCAGCTTCTGCGGGCGGTGGCCCACCTCCATGACAAT
TGGATATTGCATCGTGACCTGAAGACCTCCAATCTCCTCTTGTCCCACAA
GGGCATTCTCAAGGTGGGTGATTTCGGATTGGCAAGGGAGTATGGATCGC
CGATCAAGAAGTATACCTCACTTGTTGTCACTCTCTGGTATCGTGCACCC
GAGCTCCTTCTCTGCTCGCCGGTTTACTCCACGCCCATAGACGTCTGGTC
GGTAGGCTGCATTTTCGCCGAATTCTTGCAGATGCTGCCGCTCTTTCCGG
GAAAATCTGAAATCGATGAGCTTAACAGGATCTTTAAGGAATTGGGAACT
CCGAACGAGAAGATCTGGCCAGGATACACCGAGCTCCCAGCCGTGAAGAA
CATGTTGTCGCAGAACTCTCAGTTTACCGAGTATCCCGTCTCGCAACTGC
GCAAGCACTTCCAGGAGAAGACCTCTGAAATGGGCTTGTCGCTGCTGCAG
GGTCTGCTGACGTACGATCCGAAACAAAGACTGAGCGCCGACGCGGCACT
AAAGCACGGCTTCTTCAAGGAGCTGCCATTGCCCATCGATCCATCCATGT
TTCCCACCTGGCCGGCCAAGAGCGAGTTGGGAGCCCGCAAGGCGCAAGCC
TCTTCCCCCAAACCGCCATCCGGTGGCTCGCAGTTCAAGCAACTAGGCCG
CGACGAGCCCATCATCGTGGGACCGGGAAACAAGCTCTCATCTGGGATTA
TCACTGGCAACAAGAAGAGCCACGGAGCTGGTGGATCGTCGGCTAGCACG
GGATTTGTCCTGAACGCTGGAATAACGCAGCGCCAGTTGGCCATGGGACC
GGGATTCAGTCTGAAGTTCTGATTCTGTGTGTTTTAGCCCATTACGATTA
CGATTAATTGTTATGTATAGTTAGCGATGTAAGTGGAAAATTTCGTTTAA
TTGTATGTGTATAAATATTGTTCCATATATAATTTAAAAAGCCATACAAA
GCAAAAAAAAAAAAAAAAAA

LD39519.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:12:16
Subject Length Description Subject Range Query Range Score Percent Strand
Pitslre-RA 3385 Pitslre-RA 34..3287 1..3254 16270 100 Plus
Pitslre-RC 3357 Pitslre-RC 137..3259 132..3254 15615 100 Plus
Pitslre.a 3696 Pitslre.a 673..3598 329..3254 14630 100 Plus
Pitslre.a 3696 Pitslre.a 110..306 132..328 985 100 Plus
Pitslre-RC 3357 Pitslre-RC 65..136 1..72 360 100 Plus
Pitslre.a 3696 Pitslre.a 38..109 1..72 360 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:11:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20762812..20765074 327..2589 11315 100 Plus
chr3L 24539361 chr3L 20765192..20765857 2587..3252 3330 100 Plus
chr3L 24539361 chr3L 20760557..20760884 1..328 1640 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:34:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:11:28
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20773792..20776054 327..2589 11315 100 Plus
3L 28110227 3L 20776172..20776839 2587..3254 3340 100 Plus
3L 28110227 3L 20771537..20771864 1..328 1640 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:06:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20766892..20769154 327..2589 11315 100 Plus
3L 28103327 3L 20769272..20769939 2587..3254 3340 100 Plus
3L 28103327 3L 20764637..20764964 1..328 1640 100 Plus
Blast to na_te.dros performed 2019-03-15 20:11:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..6882 540..700 137 59.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..6804 618..700 124 65.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6703..6836 579..712 119 60.1 Plus

LD39519.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:12:31 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20760557..20760884 1..328 100 -> Plus
chr3L 20762814..20765073 329..2588 100 -> Plus
chr3L 20765194..20765857 2589..3252 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:21:44 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
Pitslre-RC 1..2859 264..3122 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:19:21 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
Pitslre-RC 1..2859 264..3122 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 04:49:15 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
Pitslre-RA 1..2859 264..3122 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:34:48 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
Pitslre-RC 1..2859 264..3122 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:30:30 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
Pitslre-RA 1..2859 264..3122 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:47:40 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
Pitslre-RA 1..3252 1..3252 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:19:20 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
Pitslre-RA 1..3252 1..3252 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:49:15 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
Pitslre-RA 10..3261 1..3252 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:34:48 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
Pitslre-RA 1..3252 1..3252 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:30:30 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
Pitslre-RA 10..3261 1..3252 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:12:31 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20771537..20771864 1..328 100 -> Plus
3L 20773794..20776053 329..2588 100 -> Plus
3L 20776174..20776837 2589..3252 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:12:31 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20771537..20771864 1..328 100 -> Plus
3L 20773794..20776053 329..2588 100 -> Plus
3L 20776174..20776837 2589..3252 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:12:31 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20771537..20771864 1..328 100 -> Plus
3L 20773794..20776053 329..2588 100 -> Plus
3L 20776174..20776837 2589..3252 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:49:15 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20764637..20764964 1..328 100 -> Plus
arm_3L 20766894..20769153 329..2588 100 -> Plus
arm_3L 20769274..20769937 2589..3252 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:48:43 Download gff for LD39519.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20764637..20764964 1..328 100 -> Plus
3L 20766894..20769153 329..2588 100 -> Plus
3L 20769274..20769937 2589..3252 100   Plus

LD39519.pep Sequence

Translation from 263 to 3121

> LD39519.pep
MVNSSGSEDGQLRSPNDVHYHSRGEEDEHEGDADALYIQPPQASRESGSG
PRREKKKHSRERRRHKERDDVGGAALALERDHRYDYRSREEHYHHHQRER
SSNAAAAYAKHHLGHAYHYPQPPQQQQQPLPPAPSYAAHHYHHHQHLSGA
RAAPREYHSYPSGYHSGSRHGDYPMEEPTRRSSKYAESKDAESLEQDLRS
RLLKKRHNYVKDYETEENYEHRVERSDRREGGRKERERTVRSTHKQNRHD
RVIELLDSPEQEHHHQHQHKSHRSKWREEVEVIRRKVPEDLELLARREKL
LAAERESRQRKQTAREELEARRELLRERNEHSDALSPTTVAASVTAGLNI
HVKRKSKPDNYEKEIKLKKRREDDIEVIRDDDDEESEESDSNEEVPEQDS
EGSATESGSEDSYASKKKSKIKSKSQLEDDDEDLPLPDSPLSVGELYKSP
KQRQRSRSVSSKSSSQSSRSSRSRSRSRSQSSLEDEVDRQDVGADASPSS
STRSEERGMTQEQPEEKPEEKLKEKQKSLEEQIPCDDKGIPLPNYYPGVQ
GCRSVEEFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPI
TSLREINTLLKGQHPNIVTVREIVVGSNMDKIFIVMDYVEHDLKSLMETM
KNRKQSFFPGEVKCLTQQLLRAVAHLHDNWILHRDLKTSNLLLSHKGILK
VGDFGLAREYGSPIKKYTSLVVTLWYRAPELLLCSPVYSTPIDVWSVGCI
FAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNMLSQ
NSQFTEYPVSQLRKHFQEKTSEMGLSLLQGLLTYDPKQRLSADAALKHGF
FKELPLPIDPSMFPTWPAKSELGARKAQASSPKPPSGGSQFKQLGRDEPI
IVGPGNKLSSGIITGNKKSHGAGGSSASTGFVLNAGITQRQLAMGPGFSL
KF*

LD39519.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:32:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10359-PA 942 GF10359-PA 1..942 1..952 3560 82.4 Plus
Dana\GF12911-PA 388 GF12911-PA 33..375 537..886 792 46.9 Plus
Dana\GF14103-PA 297 GF14103-PA 1..287 555..851 665 43.1 Plus
Dana\GF16690-PA 314 GF16690-PA 5..302 555..860 654 42.3 Plus
Dana\GF22626-PA 294 GF22626-PA 1..288 555..853 565 39.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:32:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16135-PA 968 GG16135-PA 1..968 1..952 3965 93.2 Plus
Dere\GG25234-PA 387 GG25234-PA 33..353 539..867 779 47.9 Plus
Dere\GG23938-PA 297 GG23938-PA 1..287 555..851 644 43 Plus
Dere\GG24088-PA 314 GG24088-PA 5..303 555..861 636 42.2 Plus
Dere\GG22344-PA 294 GG22344-PA 1..288 555..853 565 39.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14782-PA 1095 GH14782-PA 212..1095 164..952 2497 64.8 Plus
Dgri\GH19966-PA 388 GH19966-PA 2..355 499..867 859 46.2 Plus
Dgri\GH13856-PA 298 GH13856-PA 1..287 555..851 648 42.6 Plus
Dgri\GH17244-PA 314 GH17244-PA 4..303 554..861 608 40.8 Plus
Dgri\GH20285-PA 294 GH20285-PA 1..288 555..853 550 39.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:02:23
Subject Length Description Subject Range Query Range Score Percent Strand
Pitslre-PC 952 CG4268-PC 1..952 1..952 4974 100 Plus
Pitslre-PA 952 CG4268-PA 1..952 1..952 4974 100 Plus
Pitslre-PG 778 CG4268-PG 1..778 175..952 4000 100 Plus
Pitslre-PF 778 CG4268-PF 1..778 175..952 4000 100 Plus
Pitslre-PE 778 CG4268-PE 1..778 175..952 4000 100 Plus
Cdc2rk-PA 387 CG1362-PA 33..369 539..886 794 46.7 Plus
Cdk2-PC 314 CG10498-PC 5..303 555..861 659 43.1 Plus
Cdk2-PB 314 CG10498-PB 5..303 555..861 659 43.1 Plus
Cdk2-PA 314 CG10498-PA 5..303 555..861 659 43.1 Plus
Cdk1-PA 297 CG5363-PA 1..287 555..851 636 42.6 Plus
Cdk12-PC 1157 CG7597-PC 264..1150 40..895 631 25.8 Plus
Cdk12-PA 1157 CG7597-PA 264..1150 40..895 631 25.8 Plus
Cdk12-PB 1157 CG7597-PB 264..1150 40..895 631 25.8 Plus
Cdk9-PA 404 CG5179-PA 44..357 552..861 574 39.9 Plus
Cdk5-PA 294 CG8203-PA 1..288 555..853 554 38.7 Plus
Cdk7-PA 353 CG3319-PA 10..321 556..880 545 37.5 Plus
Eip63E-PH 501 CG10579-PH 182..485 556..863 522 39.7 Plus
Eip63E-PM 509 CG10579-PM 190..493 556..863 522 39.7 Plus
Eip63E-PC 509 CG10579-PC 190..493 556..863 522 39.7 Plus
Eip63E-PB 509 CG10579-PB 190..493 556..863 522 39.7 Plus
Eip63E-PA 509 CG10579-PA 190..493 556..863 522 39.7 Plus
Eip63E-PJ 509 CG10579-PJ 190..493 556..863 522 39.7 Plus
Eip63E-PF 509 CG10579-PF 190..493 556..863 522 39.7 Plus
Eip63E-PL 522 CG10579-PL 203..506 556..863 522 39.7 Plus
Eip63E-PE 522 CG10579-PE 203..506 556..863 522 39.7 Plus
Eip63E-PD 522 CG10579-PD 203..506 556..863 522 39.7 Plus
Eip63E-PK 522 CG10579-PK 203..506 556..863 522 39.7 Plus
Eip63E-PI 522 CG10579-PI 203..506 556..863 522 39.7 Plus
Eip63E-PG 522 CG10579-PG 203..506 556..863 522 39.7 Plus
Eip63E-PN 538 CG10579-PN 203..506 556..863 522 39.7 Plus
Cdk4-PE 317 CG5072-PE 26..317 558..856 513 40.7 Plus
Cdk4-PD 317 CG5072-PD 26..317 558..856 513 40.7 Plus
Cdk4-PB 317 CG5072-PB 26..317 558..856 513 40.7 Plus
Cdk4-PA 317 CG5072-PA 26..317 558..856 513 40.7 Plus
Cdk4-PC 317 CG5072-PC 26..317 558..856 513 40.7 Plus
Cdk8-PA 454 CG10572-PA 26..341 563..857 489 35.5 Plus
CG42366-PB 703 CG42366-PB 7..313 561..885 473 36 Plus
CG42366-PA 706 CG31711-PA 7..313 561..885 473 36 Plus
CG7236-PD 412 CG7236-PD 16..311 550..853 428 33 Plus
CG7236-PE 421 CG7236-PE 25..320 550..853 428 33 Plus
CG7236-PB 435 CG7236-PB 39..334 550..853 428 33 Plus
CG7236-PC 438 CG7236-PC 42..337 550..853 428 33 Plus
rl-PI 376 CG12559-PI 44..334 564..859 412 36.1 Plus
rl-PC 376 CG12559-PC 44..334 564..859 412 36.1 Plus
rl-PD 376 CG12559-PD 44..334 564..859 412 36.1 Plus
rl-PE 376 CG12559-PE 44..334 564..859 412 36.1 Plus
CG6800-PA 302 CG6800-PA 9..285 558..842 410 32.4 Plus
sgg-PD 1067 CG2621-PD 373..997 288..930 398 24.3 Plus
sgg-PR 597 CG2621-PR 34..466 517..930 396 28.7 Plus
sgg-PG 496 CG2621-PG 24..426 547..930 388 29 Plus
rl-PG 331 CG12559-PG 6..289 571..859 387 35.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11885-PA 967 GI11885-PA 542..967 529..952 2096 91.1 Plus
Dmoj\GI20253-PA 388 GI20253-PA 33..370 537..888 827 48.4 Plus
Dmoj\GI18275-PA 297 GI18275-PA 1..287 555..851 649 43.4 Plus
Dmoj\GI10591-PA 314 GI10591-PA 13..303 563..861 610 41.6 Plus
Dmoj\GI22478-PA 298 GI22478-PA 1..298 555..860 563 38.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12811-PA 989 GL12811-PA 1..989 1..952 3194 74.2 Plus
Dper\GL10557-PA 388 GL10557-PA 33..375 537..886 840 46 Plus
Dper\GL19151-PA 297 GL19151-PA 1..288 555..852 646 43 Plus
Dper\GL27348-PA 314 GL27348-PA 5..303 555..861 611 40.3 Plus
Dper\GL11507-PA 294 GL11507-PA 1..288 555..853 566 39.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:32:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18070-PA 989 GA18070-PA 1..989 1..952 3195 73.8 Plus
Dpse\GA12412-PA 388 GA12412-PA 33..375 537..886 840 46 Plus
Dpse\GA10356-PA 314 GA10356-PA 5..303 555..861 611 40.3 Plus
Dpse\GA20894-PA 294 GA20894-PA 1..288 555..853 566 39.7 Plus
Dpse\GA18713-PA 402 GA18713-PA 12..355 496..861 557 37.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22318-PA 971 GM22318-PA 1..971 1..952 4884 95.4 Plus
Dsec\GM20555-PA 387 GM20555-PA 31..353 537..867 777 47.9 Plus
Dsec\GM11695-PA 297 GM11695-PA 1..287 555..851 641 42.6 Plus
Dsec\GM23132-PA 314 GM23132-PA 5..303 555..861 637 42.2 Plus
Dsec\GM20132-PA 294 GM20132-PA 7..288 561..853 564 40.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:32:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14906-PA 971 GD14906-PA 1..971 1..952 4902 95.8 Plus
Dsim\GD19371-PA 314 GD19371-PA 5..303 555..861 639 42.2 Plus
Dsim\GD25609-PA 294 GD25609-PA 7..288 561..853 564 40.5 Plus
Dsim\GD24595-PA 353 GD24595-PA 10..329 556..884 561 37.2 Plus
Dsim\GD25120-PA 404 GD25120-PA 14..357 496..861 555 37.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:32:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13763-PA 978 GJ13763-PA 554..978 529..952 2126 91.8 Plus
Dvir\GJ20206-PA 388 GJ20206-PA 33..375 537..886 827 48.6 Plus
Dvir\GJ15416-PA 298 GJ15416-PA 1..287 555..851 661 43.1 Plus
Dvir\GJ21207-PA 294 GJ21207-PA 1..288 555..853 558 38.7 Plus
Dvir\GJ21256-PA 403 GJ21256-PA 43..356 552..861 547 39.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10511-PA 1038 GK10511-PA 486..1038 430..952 2201 81.9 Plus
Dwil\GK21358-PA 389 GK21358-PA 37..353 539..867 833 48.9 Plus
Dwil\GK23499-PA 296 GK23499-PA 1..288 555..852 672 43.6 Plus
Dwil\GK22466-PA 314 GK22466-PA 5..303 555..861 621 41.2 Plus
Dwil\GK11570-PA 302 GK11570-PA 9..298 563..855 598 41.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:32:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19702-PA 949 GE19702-PA 1..949 1..952 4078 95 Plus
Dyak\GE23245-PA 776 GE23245-PA 1..772 1..775 3114 93.9 Plus
Dyak\GE21808-PA 387 GE21808-PA 31..353 537..867 772 47 Plus
Dyak\GE26009-PA 297 GE26009-PA 1..287 555..851 641 42.6 Plus
Dyak\cdc2c-PA 314 GE25682-PA 5..303 555..861 637 42.5 Plus

LD39519.hyp Sequence

Translation from 263 to 3121

> LD39519.hyp
MVNSSGSEDGQLRSPNDVHYHSRGEEDEHEGDADALYIQPPQASRESGSG
PRREKKKHSRERRRHKERDDVGGAALALERDHRYDYRSREEHYHHHQRER
SSNAAAAYAKHHLGHAYHYPQPPQQQQQPLPPAPSYAAHHYHHHQHLSGA
RAAPREYHSYPSGYHSGSRHGDYPMEEPTRRSSKYAESKDAESLEQDLRS
RLLKKRHNYVKDYETEENYEHRVERSDRREGGRKERERTVRSTHKQNRHD
RVIELLDSPEQEHHHQHQHKSHRSKWREEVEVIRRKVPEDLELLARREKL
LAAERESRQRKQTAREELEARRELLRERNEHSDALSPTTVAASVTAGLNI
HVKRKSKPDNYEKEIKLKKRREDDIEVIRDDDDEESEESDSNEEVPEQDS
EGSATESGSEDSYASKKKSKIKSKSQLEDDDEDLPLPDSPLSVGELYKSP
KQRQRSRSVSSKSSSQSSRSSRSRSRSRSQSSLEDEVDRQDVGADASPSS
STRSEERGMTQEQPEEKPEEKLKEKQKSLEEQIPCDDKGIPLPNYYPGVQ
GCRSVEEFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPI
TSLREINTLLKGQHPNIVTVREIVVGSNMDKIFIVMDYVEHDLKSLMETM
KNRKQSFFPGEVKCLTQQLLRAVAHLHDNWILHRDLKTSNLLLSHKGILK
VGDFGLAREYGSPIKKYTSLVVTLWYRAPELLLCSPVYSTPIDVWSVGCI
FAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNMLSQ
NSQFTEYPVSQLRKHFQEKTSEMGLSLLQGLLTYDPKQRLSADAALKHGF
FKELPLPIDPSMFPTWPAKSELGARKAQASSPKPPSGGSQFKQLGRDEPI
IVGPGNKLSSGIITGNKKSHGAGGSSASTGFVLNAGITQRQLAMGPGFSL
KF*

LD39519.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
Pitslre-PC 952 CG4268-PC 1..952 1..952 4974 100 Plus
Pitslre-PA 952 CG4268-PA 1..952 1..952 4974 100 Plus
Pitslre-PG 778 CG4268-PG 1..778 175..952 4000 100 Plus
Pitslre-PF 778 CG4268-PF 1..778 175..952 4000 100 Plus
Pitslre-PE 778 CG4268-PE 1..778 175..952 4000 100 Plus