BDGP Sequence Production Resources |
Search the DGRC for LD39537
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 395 |
Well: | 37 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5194-RA |
Protein status: | LD39537.pep: gold |
Preliminary Size: | 1248 |
Sequenced Size: | 1108 |
Gene | Date | Evidence |
---|---|---|
CG5194 | 2001-01-01 | Release 2 assignment |
CG5194 | 2002-06-12 | Blastp of sequenced clone |
CG5194 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5194 | 2008-04-29 | Release 5.5 accounting |
CG5194 | 2008-08-15 | Release 5.9 accounting |
CG5194 | 2008-12-18 | 5.12 accounting |
1108 bp (1108 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122182
> LD39537.complete AAACATTTAACGATAATAAGCATAAGAATGAGCTCTCTTGTTGATACCAG TCACTCGGATATCGATGACAATGACTCCTTCCACTCGTTCGACCAAAGCG AAGATATCATGGACAACCTTAGCCTCTCGCTCTCGGAGAGCGACTGCGAC AGCGCCGCGGACTTTGATTCCGGCTCGGCGGATGAGATTTCCATGGAAAA AAAAATGGTTGGTGCACCCGCCCAGCTGGGCCAGGGCGCAGGAAATACTT TGAAGCCCACGCCTTCCGACGTCTTCGTAAAGCCAAAGTCGCCCGTTTTG GAGGTCCATTCCAGCGACTCATCCACCTGCGATGGCGTCTCCGCTGGCAA GCCCACACAGGTTGCGGGCTGTTTCAAGTCTCCCAAGAAGTTTACCGTTT CGCCGATCAGTGAGCAGAAGCAGAGACCAGTGCCCTTGTGTCCCAGAGAT GTTCCGGGACTTTCCTCGAGCCAGATACCATGCATAAAACACTTTGACCT TGACCACTCAGTAACAGTCCGAAAAGAGCACCTGATCTCCAATCCCGAAA CGGAGGCCTTACAAAAACACGCCTTCACCGAAATTTGGATCGATTCGCAG CAGAAACCTTGCCAGGCCAAGGTTTCTCGCTTGCAGCAGTTTTCTATGGC CCTGGAGGCCTATTTTGACCAGGATTCTGACAAGAAGGATCCGGAGCCAG CAAAAACCATCACGCCTGCTCCGAAAAGTGACAAACCCGTGGAGAAGGTG GTGTATGTGTCTCCCTTTCCGGACATTCCCATACCACCATCAGCTCGAAA AGAAACTCGCATGTTGAGCGGAGTTAAGCCACCCAATATAGTGCCAGCTG GCTTTGATTTGACCCGATTGATTGAGTACAATAATCCCAATCACTGGCAC CGTCGTCCCCACATGCGCACTGGCGATAGCATATAAACTTGATTAGCACA ACATCTTGATCAACATTGTTATTTTCGTAATCACCACACTCAACTGACCG ATTGGACGTTCTTTTTGTAAAACTGATATCTTTCTGCAATAAAGGATTCC GAACTACCAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9001012..9001510 | 705..207 | 2315 | 97.6 | Minus |
chr3L | 24539361 | chr3L | 9000604..9000961 | 1063..706 | 1745 | 99.2 | Minus |
chr3L | 24539361 | chr3L | 9001561..9001768 | 208..1 | 1025 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 9009032..9009530 | 705..207 | 2495 | 100 | Minus |
3L | 28110227 | 3L | 9008622..9008981 | 1065..706 | 1800 | 100 | Minus |
3L | 28110227 | 3L | 9009581..9009788 | 208..1 | 1040 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 9002132..9002630 | 705..207 | 2495 | 100 | Minus |
3L | 28103327 | 3L | 9001722..9002081 | 1065..706 | 1800 | 100 | Minus |
3L | 28103327 | 3L | 9002681..9002888 | 208..1 | 1040 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9000604..9000961 | 706..1063 | 99 | <- | Minus |
chr3L | 9001012..9001509 | 208..705 | 97 | <- | Minus |
chr3L | 9001562..9001768 | 1..207 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5194-RA | 1..909 | 28..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5194-RA | 1..909 | 28..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5194-RA | 1..909 | 28..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5194-RA | 1..909 | 28..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5194-RA | 1..909 | 28..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5194-RA | 64..1126 | 1..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5194-RA | 64..1126 | 1..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5194-RA | 51..1113 | 1..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5194-RA | 64..1126 | 1..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5194-RA | 51..1113 | 1..1063 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9009582..9009788 | 1..207 | 100 | Minus | |
3L | 9008624..9008981 | 706..1063 | 100 | <- | Minus |
3L | 9009032..9009529 | 208..705 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9009582..9009788 | 1..207 | 100 | Minus | |
3L | 9008624..9008981 | 706..1063 | 100 | <- | Minus |
3L | 9009032..9009529 | 208..705 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9009582..9009788 | 1..207 | 100 | Minus | |
3L | 9008624..9008981 | 706..1063 | 100 | <- | Minus |
3L | 9009032..9009529 | 208..705 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9001724..9002081 | 706..1063 | 100 | <- | Minus |
arm_3L | 9002132..9002629 | 208..705 | 100 | <- | Minus |
arm_3L | 9002682..9002888 | 1..207 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9001724..9002081 | 706..1063 | 100 | <- | Minus |
3L | 9002132..9002629 | 208..705 | 100 | <- | Minus |
3L | 9002682..9002888 | 1..207 | 100 | Minus |
Translation from 0 to 935
> LD39537.hyp KHLTIISIRMSSLVDTSHSDIDDNDSFHSFDQSEDIMDNLSLSLSESDCD SAADFDSGSADEISMEKKMVGAPAQLGQGAGNTLKPTPSDVFVKPKSPVL EVHSSDSSTCDGVSAGKPTQVAGCFKSPKKFTVSPISEQKQRPVPLCPRD VPGLSSSQIPCIKHFDLDHSVTVRKEHLISNPETEALQKHAFTEIWIDSQ QKPCQAKVSRLQQFSMALEAYFDQDSDKKDPEPAKTITPAPKSDKPVEKV VYVSPFPDIPIPPSARKETRMLSGVKPPNIVPAGFDLTRLIEYNNPNHWH RRPHMRTGDSI*
Translation from 27 to 935
> LD39537.pep MSSLVDTSHSDIDDNDSFHSFDQSEDIMDNLSLSLSESDCDSAADFDSGS ADEISMEKKMVGAPAQLGQGAGNTLKPTPSDVFVKPKSPVLEVHSSDSST CDGVSAGKPTQVAGCFKSPKKFTVSPISEQKQRPVPLCPRDVPGLSSSQI PCIKHFDLDHSVTVRKEHLISNPETEALQKHAFTEIWIDSQQKPCQAKVS RLQQFSMALEAYFDQDSDKKDPEPAKTITPAPKSDKPVEKVVYVSPFPDI PIPPSARKETRMLSGVKPPNIVPAGFDLTRLIEYNNPNHWHRRPHMRTGD SI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10131-PA | 282 | GF10131-PA | 7..277 | 7..299 | 214 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15042-PA | 306 | GG15042-PA | 1..305 | 1..302 | 919 | 68.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14957-PA | 151 | GH14957-PA | 1..142 | 150..293 | 258 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5194-PA | 302 | CG5194-PA | 1..302 | 1..302 | 1594 | 100 | Plus |
CG5194-PB | 296 | CG5194-PB | 1..296 | 1..302 | 1547 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11483-PA | 256 | GI11483-PA | 17..252 | 13..298 | 300 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23928-PA | 190 | GL23928-PA | 57..189 | 149..302 | 180 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24896-PA | 310 | GM24896-PA | 1..310 | 1..302 | 1227 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12946-PA | 311 | GD12946-PA | 1..311 | 1..302 | 1227 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13678-PA | 313 | GJ13678-PA | 17..304 | 13..293 | 304 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22731-PA | 252 | GK22731-PA | 91..247 | 139..294 | 199 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21265-PA | 314 | GE21265-PA | 1..313 | 1..302 | 916 | 67.9 | Plus |