BDGP Sequence Production Resources |
Search the DGRC for LD39576
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 395 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1896-RA |
Protein status: | LD39576.pep: gold |
Preliminary Size: | 970 |
Sequenced Size: | 823 |
Gene | Date | Evidence |
---|---|---|
CG1896 | 2001-01-01 | Release 2 assignment |
CG1896 | 2001-10-10 | Blastp of sequenced clone |
CG1896 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1896 | 2008-04-29 | Release 5.5 accounting |
CG1896 | 2008-08-15 | Release 5.9 accounting |
CG1896 | 2008-12-18 | 5.12 accounting |
823 bp (823 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061454
> LD39576.complete AGATGACTCCGCCGCACAAAAAGCATAGATTAAGTGAAGTTAAAGCCAAG ATTCAGCAAGTTATATCGAGTTTGGGGCAACTGGAGCAACAGAGCTGTGG AGCAGGTCGCGATTTCGATGTGCACCGGGCGGAGGAGCTGCAGCGGAGCA CGGCAACCCTGCTGGATGAACTTGACCAAGTACCGGGCCAACAAGTAGTC GACGAACAAAAACAAAGAAAACGCCGGCGACGCTTATATAGACGAAGCCA ACATCGGGTGATACGTGCAACCGTCAAATCTGAGGCTGCAGAACAGAAGT TCTCCATAGAACCGCCCCGAAATACCGCACTGGAACAAGCGAAGCACATA TCCCTGCGAAAACAACGCGATGCTGCCTCCATTTTGGAGACCTTTGATCT TCTGGAGAAACTTTGCGAGTCTCGTGGAGGAGACAGAGCCGCCCTTTGCC AAAAACTGACCCACATGCGTCTTGTTTGGCGCAGAGTCCAAGAAGAGACT CAAGCTGGCCATGTCAAGGAGTCCAAGAAGGTGGCTTCACTTGAATCTCA ATGGAAGGCTGTGTTCTTCGGCCGATCCTTGCCAACTCCCAAATTAAATA AGGGGAAATTTCTTGAAATTCGCTCCACATGGGATTCTTACATAAGCTAC TGTGGAAGAGGCTCCTCTATACCCAGAGGATGGGTGCTACCGCCAACAAA GCCTACAGCTCAGTGGATAGGCTATCGACTATCCTTAACTTAATATCATA GAAACCTTTCCAAAGCTCACACTCCTTATAAAGAAGCAAGATTATATAGT AAAACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1896-RA | 847 | CG1896-RA | 46..847 | 1..802 | 4010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 27566668..27567289 | 1..622 | 100 | -> | Plus |
chr3R | 27567352..27567531 | 623..805 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1896-RA | 1..741 | 3..743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1896-RA | 1..741 | 3..743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1896-RA | 1..741 | 3..743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1896-RA | 1..741 | 3..743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1896-RA | 1..741 | 3..743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1896-RA | 31..832 | 1..802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1896-RA | 31..830 | 1..800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1896-RA | 36..835 | 1..800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1896-RA | 31..832 | 1..802 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1896-RA | 36..835 | 1..800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31744317..31744938 | 1..622 | 100 | -> | Plus |
3R | 31745001..31745180 | 623..805 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31744317..31744938 | 1..622 | 100 | -> | Plus |
3R | 31745001..31745180 | 623..805 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31744317..31744938 | 1..622 | 100 | -> | Plus |
3R | 31745001..31745180 | 623..805 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 27570039..27570660 | 1..622 | 100 | -> | Plus |
arm_3R | 27570723..27570902 | 623..805 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31485148..31485769 | 1..622 | 100 | -> | Plus |
3R | 31485832..31486011 | 623..805 | 98 | Plus |
Translation from 2 to 742
> LD39576.pep MTPPHKKHRLSEVKAKIQQVISSLGQLEQQSCGAGRDFDVHRAEELQRST ATLLDELDQVPGQQVVDEQKQRKRRRRLYRRSQHRVIRATVKSEAAEQKF SIEPPRNTALEQAKHISLRKQRDAASILETFDLLEKLCESRGGDRAALCQ KLTHMRLVWRRVQEETQAGHVKESKKVASLESQWKAVFFGRSLPTPKLNK GKFLEIRSTWDSYISYCGRGSSIPRGWVLPPTKPTAQWIGYRLSLT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23255-PA | 271 | GF23255-PA | 10..246 | 9..242 | 548 | 49.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11829-PA | 245 | GG11829-PA | 1..244 | 1..244 | 930 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18654-PA | 167 | GH18654-PA | 4..165 | 71..242 | 266 | 38.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1896-PA | 246 | CG1896-PA | 1..246 | 1..246 | 1271 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23131-PA | 255 | GI23131-PA | 6..252 | 9..241 | 367 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23998-PA | 240 | GL23998-PA | 2..238 | 4..242 | 409 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15115-PB | 240 | GA15115-PB | 2..238 | 4..242 | 401 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16449-PA | 246 | GM16449-PA | 1..246 | 1..246 | 1140 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21601-PA | 246 | GD21601-PA | 1..246 | 1..246 | 1161 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23105-PA | 252 | GJ23105-PA | 5..250 | 8..242 | 365 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19211-PA | 239 | GK19211-PA | 3..237 | 8..241 | 321 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10963-PA | 245 | GE10963-PA | 1..244 | 1..244 | 1016 | 84.8 | Plus |
Translation from 2 to 742
> LD39576.hyp MTPPHKKHRLSEVKAKIQQVISSLGQLEQQSCGAGRDFDVHRAEELQRST ATLLDELDQVPGQQVVDEQKQRKRRRRLYRRSQHRVIRATVKSEAAEQKF SIEPPRNTALEQAKHISLRKQRDAASILETFDLLEKLCESRGGDRAALCQ KLTHMRLVWRRVQEETQAGHVKESKKVASLESQWKAVFFGRSLPTPKLNK GKFLEIRSTWDSYISYCGRGSSIPRGWVLPPTKPTAQWIGYRLSLT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1896-PA | 246 | CG1896-PA | 1..246 | 1..246 | 1271 | 100 | Plus |