BDGP Sequence Production Resources |
Search the DGRC for LD39612
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 396 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9723-RA |
Protein status: | LD39612.pep: gold |
Preliminary Size: | 1826 |
Sequenced Size: | 1715 |
Gene | Date | Evidence |
---|---|---|
CG9723 | 2001-01-01 | Release 2 assignment |
CG9723 | 2001-11-29 | Blastp of sequenced clone |
CG9723 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9723 | 2008-04-29 | Release 5.5 accounting |
CG9723 | 2008-08-15 | Release 5.9 accounting |
CG9723 | 2008-12-18 | 5.12 accounting |
1715 bp (1715 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069627
> LD39612.complete TAAACATCAAAACATCAAGCATAAGCAAGTCAGCATTTAACAAGCGAACG TCCTGCGAGAGCAACAGACTGAAAGCGCACTGATTGATAAGATTAACGCC ATTGCAACCGTTCATAATGCATTCGGCTGGACTACTGATGCTAACCGTGG CTGGATATTTCACATCGGGTATTCCTGGCAATACGGCTTCCTCGGACGTC GCCTACCTGACGCCGGGCACATACATCAATTTGTCGGAGAACATCTTGGG ACTGCAGACTCTGCGCACGTTCTGCTATCCGGGTAAACGGCTGACGGTGT CAAGTCTCTTCGAGACTGTGGAGTTCGTCCTGGCCATCGGGAGCGATGAT TATTCCCAGTACGGTGGGAAGACGCCGGAGGAGGTGTTGCAGCACTACAA GGACAAGCAATCGCTGTTCAGCATCACCCTGTTCGCGCAGAAGCGCCAGC TGCTGCAGCTCTCGCCCTTCGAGCAGCAGTGCATCGGGATTTCCTCCCGC CAGGCGTACACCGTCATTCTGAATAGCATTCCGCTGGATCTGTGGCGTCT CGCACAGTTCGCCGTCGGCATACTGATCCTCTTCAGCGCCCGGCGGCTAG CAAAGAACAGTGTGTTCTACTATCTGGTCGGCATTGTCATCGGCATATGC GCCTCCCTGCTGGTGGTCATCTATTTGGCCGCCAAACTCTTTCCGCGACG TACCATGATGTATGGCGTCCTAATTGGCGGCTGGACCATTGGCTTCTATG TGATCAAACAGCTGGCGGACAATCTGCGTTTGATTCTGATCACCTACCGC GACCATGTGCTGGGCTATCTGGTGATCACCGGACTGATCTCGTTCCTGAT CTGCTATCGCATTGGTCCGCCCAAGAATCCTCGATCGCAAACCATCGTCA TGTGGGTGCTGCAGGCCATTGGCGCCGTTATGGCTTACTTCAGCAGCTGG CACACCAGCGCCGTGATCTTCATCATGGTGCTGGTCTTTGTGGCCCACTA CTTCCCCATTTCGTGGACGAACCAGATCAAGTTCATGTATCGCCGCCGTT TTCCGCTAAAGAGGCGCATGCTCACCCAGGAGGAGTACGAACAGCAGACG GCCGTGGAGACCTCGAAATCGCTGGCGGACCTGCGCAAGTACGTCAACAG TCCGGAGTGCAAGCAGTGGGCGGTGATGGGCAAACTGCGTGATCCTTTGC GCTTCGCCTCGTTCGCCAATGGAGCACCGCATCTGGACGACGAAGAGATC GAGGACCACTCGCGCACCATCGAGGAGTCCATGGATGCGGCGCCCGAGGA GGAATCAGTGGAGGAACCTGAGGAGGATAAACCAGCGGAGTTACTGCCGC TGCCCAACTCGCAGTTCCGCTATCAACAGGCCGCCCGCAACTCGGAGCCG GAGCCGGAGTCGGAGTCCGATGACAGCGAGGAGGAGGAGTTCTTCGAGCA GGAGGTGGACCTTCGGCAAGTAGTACAATAACGGACGAACAGCTCAACCA CAAGGGGAACCACTGATTAGGCTTAATTGAAACCATTGACCACCACGTTC TATGCTGTACCGTTCTGTAAAATTTGTTTGTTTGGTTACCCTTTCTAATA TTTGTATAATCACTTGCAGACTGAACGGAAACACACATATTAATACAAAT TATATATTTAATTATTCATGACTGGCTAGGAATAAAAACACTTATACAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9723-RA | 1945 | CG9723-RA | 120..1817 | 1..1698 | 8490 | 100 | Plus |
CG32573-RC | 1332 | CG32573-RC | 1276..1332 | 1698..1642 | 285 | 100 | Minus |
CG32573-RA | 1782 | CG32573-RA | 1726..1782 | 1698..1642 | 285 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16542905..16543759 | 849..1697 | 98 | <- | Minus |
chrX | 16543827..16544674 | 1..848 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9723-RA | 1..1365 | 117..1481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9723-RA | 1..1365 | 117..1481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9723-RA | 1..1365 | 117..1481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9723-RA | 1..1365 | 117..1481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9723-RA | 1..1365 | 117..1481 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9723-RA | 30..1726 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9723-RA | 30..1726 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9723-RA | 33..1729 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9723-RA | 30..1726 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9723-RA | 33..1729 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16653220..16654068 | 849..1697 | 100 | <- | Minus |
X | 16654136..16654983 | 1..848 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16653220..16654068 | 849..1697 | 100 | <- | Minus |
X | 16654136..16654983 | 1..848 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16653220..16654068 | 849..1697 | 100 | <- | Minus |
X | 16654136..16654983 | 1..848 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16547253..16548101 | 849..1697 | 100 | <- | Minus |
arm_X | 16548169..16549016 | 1..848 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16661318..16662166 | 849..1697 | 100 | <- | Minus |
X | 16662234..16663081 | 1..848 | 100 | Minus |
Translation from 116 to 1480
> LD39612.pep MHSAGLLMLTVAGYFTSGIPGNTASSDVAYLTPGTYINLSENILGLQTLR TFCYPGKRLTVSSLFETVEFVLAIGSDDYSQYGGKTPEEVLQHYKDKQSL FSITLFAQKRQLLQLSPFEQQCIGISSRQAYTVILNSIPLDLWRLAQFAV GILILFSARRLAKNSVFYYLVGIVIGICASLLVVIYLAAKLFPRRTMMYG VLIGGWTIGFYVIKQLADNLRLILITYRDHVLGYLVITGLISFLICYRIG PPKNPRSQTIVMWVLQAIGAVMAYFSSWHTSAVIFIMVLVFVAHYFPISW TNQIKFMYRRRFPLKRRMLTQEEYEQQTAVETSKSLADLRKYVNSPECKQ WAVMGKLRDPLRFASFANGAPHLDDEEIEDHSRTIEESMDAAPEEESVEE PEEDKPAELLPLPNSQFRYQQAARNSEPEPESESDDSEEEEFFEQEVDLR QVVQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22652-PA | 463 | GF22652-PA | 23..438 | 23..420 | 1370 | 61.1 | Plus |
Dana\GF14306-PA | 456 | GF14306-PA | 54..455 | 46..443 | 219 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18239-PA | 457 | GG18239-PA | 1..443 | 1..429 | 1693 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24515-PA | 468 | GH24515-PA | 9..398 | 5..399 | 1328 | 62.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9723-PA | 454 | CG9723-PA | 1..454 | 1..454 | 2331 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14429-PA | 458 | GI14429-PA | 25..398 | 26..399 | 1385 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13121-PA | 463 | GL13121-PA | 29..435 | 26..434 | 1375 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23067-PA | 437 | GA23067-PA | 2..437 | 26..446 | 1365 | 58.7 | Plus |
Dpse\GA23066-PA | 423 | GA23066-PA | 2..395 | 26..421 | 1327 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13381-PA | 468 | GM13381-PA | 1..443 | 1..423 | 1848 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15737-PA | 468 | GD15737-PA | 1..443 | 1..423 | 1867 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18770-PA | 472 | GJ18770-PA | 5..380 | 21..396 | 1377 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25696-PA | 483 | GK25696-PA | 18..384 | 23..389 | 1370 | 66.5 | Plus |
Translation from 116 to 1480
> LD39612.hyp MHSAGLLMLTVAGYFTSGIPGNTASSDVAYLTPGTYINLSENILGLQTLR TFCYPGKRLTVSSLFETVEFVLAIGSDDYSQYGGKTPEEVLQHYKDKQSL FSITLFAQKRQLLQLSPFEQQCIGISSRQAYTVILNSIPLDLWRLAQFAV GILILFSARRLAKNSVFYYLVGIVIGICASLLVVIYLAAKLFPRRTMMYG VLIGGWTIGFYVIKQLADNLRLILITYRDHVLGYLVITGLISFLICYRIG PPKNPRSQTIVMWVLQAIGAVMAYFSSWHTSAVIFIMVLVFVAHYFPISW TNQIKFMYRRRFPLKRRMLTQEEYEQQTAVETSKSLADLRKYVNSPECKQ WAVMGKLRDPLRFASFANGAPHLDDEEIEDHSRTIEESMDAAPEEESVEE PEEDKPAELLPLPNSQFRYQQAARNSEPEPESESDDSEEEEFFEQEVDLR QVVQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9723-PA | 454 | CG9723-PA | 1..454 | 1..454 | 2331 | 100 | Plus |