BDGP Sequence Production Resources |
Search the DGRC for LD39624
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 396 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3209-RB |
Protein status: | LD39624.pep: gold |
Preliminary Size: | 1780 |
Sequenced Size: | 1644 |
Gene | Date | Evidence |
---|---|---|
CG3209 | 2001-01-01 | Release 2 assignment |
CG3209 | 2001-07-04 | Blastp of sequenced clone |
CG3209 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3209 | 2008-04-29 | Release 5.5 accounting |
CG3209 | 2008-08-15 | Release 5.9 accounting |
CG3209 | 2008-12-18 | 5.12 accounting |
1644 bp (1644 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051906
> LD39624.complete CCATCGCTAGTTCGGTCTACAGCAAAAAGTATTTTAACATTGTATATATT GGCACGACACAATTCGGAGGCATTTTTCGCTTAACAATAACTAATGTCGC ATGACACAAATGTAAAATGATCGCCGTGCTGTTGGACATATTCTGGATCC CCATCGGGGGCTTCCTCTCATTTCTCATATTTATTTCCGCCATAAACAAA TCAATCGGCGTCCGAAAAGCGTACGTGAACCTCCTCCTAAGGATATTCGA GTATGGTCGAGTTAGTATAGAGACAGCATCCAAAGAAAACCAACACATTC AAAATCCCAAGACTGACGACAAACAGGGAGTGCAACTAGTGGACGACGCC GATTCCAAAGAAGGCACCAATGGAGCCACATTGATTACCAGGGACGCGGT ACTCCTGCCCCAGCCACAGGAGCCCGCTCCAGAGAAGCCAGTTTCCTCCA CAAAGGATGAAATCAATTTCGATTTTGAGAAATGCCTGGACTACGTAAAG TCTGGCGTGGAGGCCATCATCGAGGACGATGTTACGTCGCGCTTCGAGGC GGAGGAGCTCAAGAGCTGGAACATGCTGACACGCACCAATAGGCACTACG AGTTCATTTCCTGGAAAATCACCTCCATCTGGGTGTTCGGCTTCTTCATC CGCTACGTCATCCTGATGCCCCTCCGGGTATTGGTATGCTTCGTTGGTGT AGTGTGGTTAACAGTCTGCACGGCTGCAGTGGGATACTTGAAGGATGGGC CCTTCAAGCGGGATCTCGTGCACAAGGTGCTCGGCATGTGCTTCGGCGTT TTGTCCAGCGCTATATCGGCGGTTATCACCTACCACAATGAGGATAATCG CCCGTCATCCGGTATTTGTGTTGCCAATCACACCAGTCCCATTGATGTGC TGGTCCTGATGTGCGACTCGACCTACTCGCTGATTGGCCAACGCCATGGC GGCTTTTTGGGGGTGCTGCAACGAGCTCTGGCCCGCGCATCTCCCCACAT TTGGTTTGAGCGCGGCGAGGCCAAGGATCGTCATTTGGTGGCCGAGCGAC TGAAGCAGCACGTGTCTGATCCGAACAACCCACCGATCCTTATCTTCCCG GAGGGAACTTGCATCAACAACACGTCGGTCATGCAGTTCAAGAAGGGCAG CTTCGAAGTTGGCGGCGTCATCTACCCGGTGGCCATTAAGTACGATCCGA GGTTCGGCGACGCCTTCTGGAACAGCGCGAAGTACTCGATGATGCAGTAT CTGTACATGATGATGACCTCGTGGGCCATCGTGTGCGATGTGTGGTACCT GCCGCCGATGTACAGGCAGGAGGGAGAGTCGGCGATCGACTTCGCGAACC GCGTGAAGAGTGTCATCGCGAAGCAGGGAGGTTTGATTGATCTGGTCTGG GACGGGCAGCTGAAGCGCATGAAGCCAAAGAAGGAGTGGAGGGAGATCCA GCAAGTCGAGTTTGCCAATCGGCTGAAGTCGGACTCCACCTAAATTACCA TATTACCATACAGTGACTGTAAATGATATACATACATGATTTTGCATAAT TTGTATTGCAGCGACTGTAATTTGTATAAATTACGATTAACAATTGGATG GTTAAATAAAAGATGAAGTCAAATGTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3209.b | 2612 | CG3209.b | 328..1954 | 1..1627 | 8135 | 100 | Plus |
CG3209.d | 2261 | CG3209.d | 328..1954 | 1..1627 | 8135 | 100 | Plus |
CG3209.a | 2125 | CG3209.a | 1110..2038 | 699..1627 | 4645 | 100 | Plus |
CG3209.a | 2125 | CG3209.a | 175..874 | 1..700 | 3500 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19959033..19959469 | 1190..1626 | 2185 | 100 | Plus |
chr2R | 21145070 | chr2R | 19955100..19955350 | 1..251 | 1240 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 19958709..19958968 | 932..1191 | 1240 | 98.5 | Plus |
chr2R | 21145070 | chr2R | 19956014..19956260 | 454..700 | 1235 | 100 | Plus |
chr2R | 21145070 | chr2R | 19957996..19958229 | 699..932 | 1155 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 19955753..19955959 | 250..456 | 1020 | 99.5 | Plus |
chrX | 22417052 | chrX | 20690472..20690615 | 1083..1226 | 240 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24073028..24073465 | 1190..1627 | 2190 | 100 | Plus |
2R | 25286936 | 2R | 24072704..24072963 | 932..1191 | 1300 | 100 | Plus |
2R | 25286936 | 2R | 24069084..24069334 | 1..251 | 1255 | 100 | Plus |
2R | 25286936 | 2R | 24069998..24070244 | 454..700 | 1235 | 100 | Plus |
2R | 25286936 | 2R | 24071991..24072224 | 699..932 | 1170 | 100 | Plus |
2R | 25286936 | 2R | 24069737..24069943 | 250..456 | 1035 | 100 | Plus |
X | 23542271 | X | 20825153..20825296 | 1083..1226 | 240 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24074227..24074664 | 1190..1627 | 2190 | 100 | Plus |
2R | 25260384 | 2R | 24073903..24074162 | 932..1191 | 1300 | 100 | Plus |
2R | 25260384 | 2R | 24070283..24070533 | 1..251 | 1255 | 100 | Plus |
2R | 25260384 | 2R | 24071197..24071443 | 454..700 | 1235 | 100 | Plus |
2R | 25260384 | 2R | 24073190..24073423 | 699..932 | 1170 | 100 | Plus |
2R | 25260384 | 2R | 24070936..24071142 | 250..456 | 1035 | 100 | Plus |
X | 23527363 | X | 20810245..20810388 | 1083..1226 | 240 | 77.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19955100..19955350 | 1..251 | 99 | -> | Plus |
chr2R | 19955755..19955958 | 252..455 | 99 | -> | Plus |
chr2R | 19956016..19956258 | 456..698 | 100 | -> | Plus |
chr2R | 19957996..19958229 | 699..932 | 99 | -> | Plus |
chr2R | 19958710..19958966 | 933..1189 | 98 | -> | Plus |
chr2R | 19959033..19959469 | 1190..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3209-RB | 1..1377 | 117..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3209-RB | 1..1377 | 117..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3209-RB | 1..1377 | 117..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3209-RB | 1..1377 | 117..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3209-RB | 1..1377 | 117..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3209-RB | 175..1800 | 1..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3209-RB | 175..1800 | 1..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3209-RB | 35..1660 | 1..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3209-RB | 175..1800 | 1..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3209-RB | 35..1660 | 1..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24069084..24069334 | 1..251 | 100 | -> | Plus |
2R | 24069739..24069942 | 252..455 | 100 | -> | Plus |
2R | 24070000..24070242 | 456..698 | 100 | -> | Plus |
2R | 24071991..24072224 | 699..932 | 100 | -> | Plus |
2R | 24072705..24072961 | 933..1189 | 100 | -> | Plus |
2R | 24073028..24073464 | 1190..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24069084..24069334 | 1..251 | 100 | -> | Plus |
2R | 24069739..24069942 | 252..455 | 100 | -> | Plus |
2R | 24070000..24070242 | 456..698 | 100 | -> | Plus |
2R | 24071991..24072224 | 699..932 | 100 | -> | Plus |
2R | 24072705..24072961 | 933..1189 | 100 | -> | Plus |
2R | 24073028..24073464 | 1190..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24069084..24069334 | 1..251 | 100 | -> | Plus |
2R | 24069739..24069942 | 252..455 | 100 | -> | Plus |
2R | 24070000..24070242 | 456..698 | 100 | -> | Plus |
2R | 24071991..24072224 | 699..932 | 100 | -> | Plus |
2R | 24072705..24072961 | 933..1189 | 100 | -> | Plus |
2R | 24073028..24073464 | 1190..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19956607..19956857 | 1..251 | 100 | -> | Plus |
arm_2R | 19957262..19957465 | 252..455 | 100 | -> | Plus |
arm_2R | 19957523..19957765 | 456..698 | 100 | -> | Plus |
arm_2R | 19959514..19959747 | 699..932 | 100 | -> | Plus |
arm_2R | 19960228..19960484 | 933..1189 | 100 | -> | Plus |
arm_2R | 19960551..19960987 | 1190..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24074245..24074681 | 1190..1626 | 100 | Plus | |
2R | 24070301..24070551 | 1..251 | 100 | -> | Plus |
2R | 24070956..24071159 | 252..455 | 100 | -> | Plus |
2R | 24071217..24071459 | 456..698 | 100 | -> | Plus |
2R | 24073208..24073441 | 699..932 | 100 | -> | Plus |
2R | 24073922..24074178 | 933..1189 | 100 | -> | Plus |
Translation from 116 to 1492
> LD39624.pep MIAVLLDIFWIPIGGFLSFLIFISAINKSIGVRKAYVNLLLRIFEYGRVS IETASKENQHIQNPKTDDKQGVQLVDDADSKEGTNGATLITRDAVLLPQP QEPAPEKPVSSTKDEINFDFEKCLDYVKSGVEAIIEDDVTSRFEAEELKS WNMLTRTNRHYEFISWKITSIWVFGFFIRYVILMPLRVLVCFVGVVWLTV CTAAVGYLKDGPFKRDLVHKVLGMCFGVLSSAISAVITYHNEDNRPSSGI CVANHTSPIDVLVLMCDSTYSLIGQRHGGFLGVLQRALARASPHIWFERG EAKDRHLVAERLKQHVSDPNNPPILIFPEGTCINNTSVMQFKKGSFEVGG VIYPVAIKYDPRFGDAFWNSAKYSMMQYLYMMMTSWAIVCDVWYLPPMYR QEGESAIDFANRVKSVIAKQGGLIDLVWDGQLKRMKPKKEWREIQQVEFA NRLKSDST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11367-PA | 539 | GF11367-PA | 276..539 | 195..458 | 1420 | 97.3 | Plus |
Dana\GF11367-PA | 539 | GF11367-PA | 1..276 | 1..273 | 1054 | 74.3 | Plus |
Dana\GF21703-PA | 440 | GF21703-PA | 108..440 | 113..442 | 959 | 49.8 | Plus |
Dana\GF22630-PA | 558 | GF22630-PA | 102..351 | 187..423 | 205 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22933-PA | 537 | GG22933-PA | 274..537 | 195..458 | 1447 | 100 | Plus |
Dere\GG22933-PA | 537 | GG22933-PA | 1..274 | 1..273 | 1139 | 79.9 | Plus |
Dere\GG19698-PA | 439 | GG19698-PA | 107..439 | 113..442 | 918 | 47.7 | Plus |
Dere\GG18969-PA | 474 | GG18969-PA | 64..331 | 169..423 | 217 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21717-PA | 537 | GH21717-PA | 273..537 | 192..456 | 1354 | 92.8 | Plus |
Dgri\GH17744-PA | 405 | GH17744-PA | 59..405 | 99..442 | 934 | 49 | Plus |
Dgri\GH21717-PA | 537 | GH21717-PA | 1..276 | 1..273 | 891 | 62 | Plus |
Dgri\GH12406-PA | 556 | GH12406-PA | 84..344 | 171..418 | 203 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gpat4-PB | 458 | CG3209-PB | 1..458 | 1..458 | 2411 | 100 | Plus |
Gpat4-PC | 459 | CG3209-PC | 1..459 | 1..458 | 2133 | 89.3 | Plus |
Gpat4-PD | 537 | CG3209-PD | 274..537 | 195..458 | 1410 | 100 | Plus |
Gpat4-PD | 537 | CG3209-PD | 1..274 | 1..273 | 1138 | 81.8 | Plus |
Gpat4-PE | 380 | CG3209-PE | 1..195 | 1..195 | 1004 | 99.5 | Plus |
Gpat4-PE | 380 | CG3209-PE | 188..380 | 263..458 | 999 | 96.4 | Plus |
CG15450-PA | 407 | CG15450-PA | 75..407 | 113..442 | 909 | 47.7 | Plus |
LPCAT-PB | 533 | CG32699-PB | 63..328 | 171..423 | 217 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18864-PA | 538 | GI18864-PA | 273..538 | 192..456 | 1355 | 93.2 | Plus |
Dmoj\GI18864-PA | 538 | GI18864-PA | 1..276 | 1..273 | 821 | 63.4 | Plus |
Dmoj\GI15857-PA | 554 | GI15857-PA | 84..344 | 171..418 | 223 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11661-PA | 531 | GL11661-PA | 267..531 | 192..456 | 1368 | 94 | Plus |
Dper\GL11661-PA | 531 | GL11661-PA | 1..270 | 1..273 | 948 | 67.2 | Plus |
Dper\GL15809-PA | 417 | GL15809-PA | 82..417 | 109..441 | 926 | 47.6 | Plus |
Dper\GL13112-PA | 512 | GL13112-PA | 75..342 | 169..423 | 228 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16670-PA | 531 | GA16670-PA | 267..531 | 192..456 | 1368 | 94 | Plus |
Dpse\GA16670-PA | 531 | GA16670-PA | 1..270 | 1..273 | 948 | 67.2 | Plus |
Dpse\GA13739-PA | 417 | GA13739-PA | 82..417 | 109..441 | 928 | 48.2 | Plus |
Dpse\GA23062-PA | 512 | GA23062-PA | 75..342 | 169..423 | 229 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18300-PA | 537 | GM18300-PA | 274..537 | 195..458 | 1446 | 99.6 | Plus |
Dsec\GM18300-PA | 537 | GM18300-PA | 1..274 | 1..273 | 1139 | 79.9 | Plus |
Dsec\GM23052-PA | 281 | GM23052-PA | 161..281 | 322..442 | 435 | 58.7 | Plus |
Dsec\GM11357-PA | 452 | GM11357-PA | 61..328 | 169..423 | 217 | 25.5 | Plus |
Dsec\GM23052-PA | 281 | GM23052-PA | 75..158 | 113..193 | 168 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11832-PA | 537 | GD11832-PA | 274..537 | 195..458 | 1448 | 100 | Plus |
Dsim\GD11832-PA | 537 | GD11832-PA | 1..274 | 1..273 | 1148 | 80.7 | Plus |
Dsim\GD24693-PA | 435 | GD24693-PA | 103..435 | 113..442 | 924 | 47.4 | Plus |
Dsim\GD16057-PA | 361 | GD16057-PA | 62..237 | 250..423 | 201 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20434-PA | 537 | GJ20434-PA | 273..537 | 192..456 | 1363 | 93.2 | Plus |
Dvir\GJ19255-PA | 425 | GJ19255-PA | 92..425 | 112..442 | 890 | 50.6 | Plus |
Dvir\GJ20434-PA | 537 | GJ20434-PA | 1..276 | 1..273 | 819 | 60.1 | Plus |
Dvir\GJ19019-PA | 439 | GJ19019-PA | 39..306 | 169..423 | 220 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21924-PA | 536 | GK21924-PA | 272..536 | 192..456 | 1391 | 94.7 | Plus |
Dwil\GK21924-PA | 536 | GK21924-PA | 1..275 | 1..273 | 948 | 66.2 | Plus |
Dwil\GK19819-PA | 326 | GK19819-PA | 1..326 | 120..442 | 922 | 51.5 | Plus |
Dwil\GK10139-PA | 552 | GK10139-PA | 56..323 | 169..423 | 227 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14370-PA | 537 | GE14370-PA | 274..537 | 195..458 | 1450 | 100 | Plus |
Dyak\GE14370-PA | 537 | GE14370-PA | 1..274 | 1..273 | 1145 | 80.3 | Plus |
Dyak\GE17896-PA | 407 | GE17896-PA | 75..407 | 113..442 | 915 | 46.5 | Plus |
Dyak\GE15443-PA | 455 | GE15443-PA | 64..331 | 169..423 | 218 | 25.5 | Plus |
Translation from 116 to 1492
> LD39624.hyp MIAVLLDIFWIPIGGFLSFLIFISAINKSIGVRKAYVNLLLRIFEYGRVS IETASKENQHIQNPKTDDKQGVQLVDDADSKEGTNGATLITRDAVLLPQP QEPAPEKPVSSTKDEINFDFEKCLDYVKSGVEAIIEDDVTSRFEAEELKS WNMLTRTNRHYEFISWKITSIWVFGFFIRYVILMPLRVLVCFVGVVWLTV CTAAVGYLKDGPFKRDLVHKVLGMCFGVLSSAISAVITYHNEDNRPSSGI CVANHTSPIDVLVLMCDSTYSLIGQRHGGFLGVLQRALARASPHIWFERG EAKDRHLVAERLKQHVSDPNNPPILIFPEGTCINNTSVMQFKKGSFEVGG VIYPVAIKYDPRFGDAFWNSAKYSMMQYLYMMMTSWAIVCDVWYLPPMYR QEGESAIDFANRVKSVIAKQGGLIDLVWDGQLKRMKPKKEWREIQQVEFA NRLKSDST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3209-PB | 458 | CG3209-PB | 1..458 | 1..458 | 2411 | 100 | Plus |
CG3209-PC | 459 | CG3209-PC | 1..459 | 1..458 | 2133 | 89.3 | Plus |
CG3209-PD | 537 | CG3209-PD | 274..537 | 195..458 | 1410 | 100 | Plus |
CG3209-PD | 537 | CG3209-PD | 1..274 | 1..273 | 1138 | 81.8 | Plus |
CG3209-PE | 380 | CG3209-PE | 1..195 | 1..195 | 1004 | 99.5 | Plus |
CG3209-PE | 380 | CG3209-PE | 188..380 | 263..458 | 999 | 96.4 | Plus |
CG15450-PA | 407 | CG15450-PA | 75..407 | 113..442 | 909 | 47.7 | Plus |