Clone LD39850 Report

Search the DGRC for LD39850

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:398
Well:50
Vector:pOT2
Associated Gene/TranscriptCG3511-RA
Protein status:LD39850.pep: gold
Preliminary Size:2499
Sequenced Size:2180

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3511 2001-01-01 Release 2 assignment
CG3511 2001-07-04 Blastp of sequenced clone
CG3511 2003-01-01 Sim4 clustering to Release 3
CG3511 2008-04-29 Release 5.5 accounting
CG3511 2008-08-15 Release 5.9 accounting
CG3511 2008-12-18 5.12 accounting

Clone Sequence Records

LD39850.complete Sequence

2180 bp (2180 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051909

> LD39850.complete
AAAGGCGGAAAGTACTGATGGGGGTTTCACTTCGATTTGTTTTGAGTTAA
AATACAGGATATTCGTCCAAAGATATCGCAGAATCATTTGAATCAGCTGC
TTTTGACCGTTAACCAACACTGTTTAATCGGCGGCAAACTAGTTCAGTCG
TATTTTGTTTATTAACTTCCAAAATGAGTGATAAAACCAAGGAAGACCTG
AAGCGCAGTGCCCCGGAGGAGGAGAATGAGCCCCAGGAGGAATCTGTGTC
ATCCGAAAAAGAGGCGGAAGGCGAGGAAGACGCCTGGATTGGACCCATGC
CTTCAGAGCAGAGCGCTCCCGCGCCCGCCAAGAAAAAGAAGGTCCTGCCC
TATGAACACATCTACCTGGAAAACCTGCCCAATGCTGAGAGCTACGAGAG
GAGCTACATGCACCGCGATGTGATCACTCATTTGGTGTGCACGAAGACGG
ATTTCGTAGTGACCGCCAGTCTGGATGGACACATCAAATTCTGGAAGAAG
GGCGAGCTGGGCATCGAGTTCGTCAAGCACTTTCGCAGCCACCTAGTACC
CATCAAATCACTGACCACCAACGACAGCGGCACGCTGCTCTGCTCGGCGG
CCACGGATCAGACAGCCAAGGTCTTCGATGTTGTCAACTTCGACATGATC
AACATCATTCGATTGGGCTACACACCGCAGTGCAGTGAGTGGATAAATGG
GCCGGGAGATGCCGTACAAGCACTGGCCATCTCGGATTCAGAGAGTAGCC
GCATACACATCTACGACGGGCAAGGAGGCGGAGAAGCCCTTCACACCTTG
GAGAAACTTCACTCGGCGCCCGTGGTGGCGATGTGCTTGAATGTGGCCAT
GGAGACCGTCATTTCTGTCGATCGCAATGGCATTCTCGAATACTGGCAAA
ACTCGAAGTACGACTACAAGTTTCCACAGCGTCTGGTGAATTTTGACTCC
AAGCTAGACACAAGCCTCTTTGAGTTTGCCAAACAGAAGACCCAAGTCAC
GGGTTTAGCCGCCACGCCGGATGGAAAGCGTTTTGCCGCCATTTCCACAG
ATCGTAAGGTCCGCGTCTTTCAGTTCAACACGGGCAAGTTGATCCGGGTA
TTCGATGAAGCTCTATCTACATACACCCAAATGCAGCAGACGAAGCACGC
CCTGCCCAACATGGAGTTTGGCAGAAGAATGGCGGCTGAGCGGGATCTGG
AGAAGACTGCCCAGAATGCAACCCTTAATATTTTGTTCGACAGCACTGGC
AACTTCTTGCTCTACCCAACGATGTTGGGCATCAAGGTGATCAATGTGGT
AACGAATCGCTGCGTCACAATTCTAGGAAAAACCGACAACATACGGCCCC
TCCAGGTGGCCTTGTTTCAAGGAAGAATTAAGCGCCAAAAAGCTGCTATA
ACAATGGAGCAAGAGGCCAGTGAAAACCCAGCACTCCAGAATATCCTTAA
CGATCCAACAGCCTTTTGCACTGCTTACAAAAAAAGTCGCTTCTATTTGT
ACAGCCGAAGACTGCCCTCGGATCTGCAGGATGTCGACCGCGATATTTTC
AACGAGAAGCCCTCGAAGGAGGACATTATCGCCGTGCCGGAAGCTTCAGT
CGTGCAACGCATCTACGAGAACGTGGTGCTCCACACCACGAAAGGCGATA
TCCACATGAGGCTGTTCTTCAAGGAGGTTCCAAAGACGGTTGAGAACTTC
TGTGTTCATGCGAAAAATGGGTACTACAATGGACACATATTCCATCGCGT
GATCAAGGGCTTCATGGTGCAGACTGGCGATCCCACGGGAACGGGCACGG
GCGGCAAATCCATTTGGGGAAGCGATTTCAAAGACGAGTTCGTGCCGAGC
CTGAAACACGATCGGCCCTACACGGTCAGCATGGCTAACGCGGGTCCAAA
CACGAATGGAAGCCAGTTCTTTATCACAGTCCTGCCCACGCCCTGGCTCG
ACAACAAGCACACGGTGTTCGGAAGAGTTTACCGCGGCATGGAGGTGGTT
CTCAACATTTGCAATTCCAAGGCGAATCCCAAGACGGACAAGCCCTACGA
CGACATTAAAATTATTTCGATACACTTAAGTAATTGAGCAGAGGGCTAAA
ATAAAACTTTCAGCGACACTGGTTTTCAAATCTTCGGAGAACCGCCAATG
CGCCGCAAAGAAAAAAAAAAAAAAAAAAAA

LD39850.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:59:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG3511.a 2330 CG3511.a 168..2329 1..2162 10810 100 Plus
CG3511-RA 2251 CG3511-RA 85..2246 1..2162 10810 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:45:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 20459101..20459405 1176..1480 1510 99.7 Plus
chr2R 21145070 chr2R 20457693..20457996 39..342 1490 99.3 Plus
chr2R 21145070 chr2R 20458541..20458778 727..964 1175 99.6 Plus
chr2R 21145070 chr2R 20459916..20460136 1720..1940 1105 100 Plus
chr2R 21145070 chr2R 20460204..20460424 1940..2160 1105 100 Plus
chr2R 21145070 chr2R 20458836..20459049 964..1177 1040 99.1 Plus
chr2R 21145070 chr2R 20458046..20458250 342..546 1025 100 Plus
chr2R 21145070 chr2R 20458306..20458491 545..730 930 100 Plus
chr2R 21145070 chr2R 20459735..20459860 1598..1723 630 100 Plus
chr2R 21145070 chr2R 20459473..20459591 1481..1599 580 99.2 Plus
chr2R 21145070 chr2R 20457591..20457629 1..39 195 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:34:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24573180..24573484 1176..1480 1525 100 Plus
2R 25286936 2R 24571771..24572074 39..342 1520 100 Plus
2R 25286936 2R 24572620..24572857 727..964 1175 99.6 Plus
2R 25286936 2R 24574283..24574505 1940..2162 1115 100 Plus
2R 25286936 2R 24573995..24574215 1720..1940 1105 100 Plus
2R 25286936 2R 24572915..24573128 964..1177 1070 100 Plus
2R 25286936 2R 24572124..24572328 342..546 1025 100 Plus
2R 25286936 2R 24572384..24572569 545..730 930 100 Plus
2R 25286936 2R 24573814..24573939 1598..1723 630 100 Plus
2R 25286936 2R 24573552..24573670 1481..1599 595 100 Plus
2R 25286936 2R 24571669..24571707 1..39 195 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:18:29
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 24574379..24574683 1176..1480 1525 100 Plus
2R 25260384 2R 24572970..24573273 39..342 1520 100 Plus
2R 25260384 2R 24573819..24574056 727..964 1175 99.5 Plus
2R 25260384 2R 24575482..24575704 1940..2162 1115 100 Plus
2R 25260384 2R 24575194..24575414 1720..1940 1105 100 Plus
2R 25260384 2R 24574114..24574327 964..1177 1070 100 Plus
2R 25260384 2R 24573323..24573527 342..546 1025 100 Plus
2R 25260384 2R 24573583..24573768 545..730 930 100 Plus
2R 25260384 2R 24575013..24575138 1598..1723 630 100 Plus
2R 25260384 2R 24574751..24574869 1481..1599 595 100 Plus
2R 25260384 2R 24572868..24572906 1..39 195 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:45:06 has no hits.

LD39850.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:45:48 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 20457591..20457629 1..39 100 -> Plus
chr2R 20457694..20457996 40..342 99 -> Plus
chr2R 20458047..20458250 343..546 100 -> Plus
chr2R 20458308..20458491 547..730 100 -> Plus
chr2R 20458545..20458777 731..963 100 -> Plus
chr2R 20458836..20459049 964..1177 99 -> Plus
chr2R 20459103..20459405 1178..1480 99 -> Plus
chr2R 20459473..20459591 1481..1599 99 -> Plus
chr2R 20459737..20459857 1600..1720 100 -> Plus
chr2R 20459917..20460136 1721..1940 100 -> Plus
chr2R 20460205..20460424 1941..2160 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:22:07 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
CG3511-RA 1..1914 174..2087 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:59:19 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
CG3511-RA 1..1914 174..2087 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:12:03 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
CG3511-RA 1..1914 174..2087 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:42:36 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
CG3511-RA 1..1914 174..2087 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:40:36 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
CG3511-RA 1..1914 174..2087 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:14:23 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
CG3511-RA 1..2160 1..2160 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:59:19 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
CG3511-RA 1..2160 1..2160 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:12:03 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
CG3511-RA 43..2202 1..2160 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:42:36 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
CG3511-RA 1..2160 1..2160 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:40:36 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
CG3511-RA 43..2202 1..2160 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:48 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24573996..24574215 1721..1940 100 -> Plus
2R 24574284..24574503 1941..2160 100   Plus
2R 24571669..24571707 1..39 100 -> Plus
2R 24571772..24572074 40..342 100 -> Plus
2R 24572125..24572328 343..546 100 -> Plus
2R 24572386..24572569 547..730 100 -> Plus
2R 24572624..24572856 731..963 100 -> Plus
2R 24572915..24573128 964..1177 100 -> Plus
2R 24573182..24573484 1178..1480 100 -> Plus
2R 24573552..24573670 1481..1599 100 -> Plus
2R 24573816..24573936 1600..1720 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:48 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24573996..24574215 1721..1940 100 -> Plus
2R 24574284..24574503 1941..2160 100   Plus
2R 24571669..24571707 1..39 100 -> Plus
2R 24571772..24572074 40..342 100 -> Plus
2R 24572125..24572328 343..546 100 -> Plus
2R 24572386..24572569 547..730 100 -> Plus
2R 24572624..24572856 731..963 100 -> Plus
2R 24572915..24573128 964..1177 100 -> Plus
2R 24573182..24573484 1178..1480 100 -> Plus
2R 24573552..24573670 1481..1599 100 -> Plus
2R 24573816..24573936 1600..1720 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:48 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24573996..24574215 1721..1940 100 -> Plus
2R 24574284..24574503 1941..2160 100   Plus
2R 24571669..24571707 1..39 100 -> Plus
2R 24571772..24572074 40..342 100 -> Plus
2R 24572125..24572328 343..546 100 -> Plus
2R 24572386..24572569 547..730 100 -> Plus
2R 24572624..24572856 731..963 100 -> Plus
2R 24572915..24573128 964..1177 100 -> Plus
2R 24573182..24573484 1178..1480 100 -> Plus
2R 24573552..24573670 1481..1599 100 -> Plus
2R 24573816..24573936 1600..1720 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:12:03 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20461519..20461738 1721..1940 100 -> Plus
arm_2R 20461807..20462026 1941..2160 100   Plus
arm_2R 20459192..20459230 1..39 100 -> Plus
arm_2R 20459295..20459597 40..342 100 -> Plus
arm_2R 20459648..20459851 343..546 100 -> Plus
arm_2R 20459909..20460092 547..730 100 -> Plus
arm_2R 20460147..20460379 731..963 100 -> Plus
arm_2R 20460438..20460651 964..1177 100 -> Plus
arm_2R 20460705..20461007 1178..1480 100 -> Plus
arm_2R 20461075..20461193 1481..1599 100 -> Plus
arm_2R 20461339..20461459 1600..1720 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:25:58 Download gff for LD39850.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24573603..24573786 547..730 100 -> Plus
2R 24574132..24574345 964..1177 100 -> Plus
2R 24573841..24574073 731..963 100 -> Plus
2R 24572989..24573291 40..342 100 -> Plus
2R 24573342..24573545 343..546 100 -> Plus
2R 24574399..24574701 1178..1480 100 -> Plus
2R 24574769..24574887 1481..1599 100 -> Plus
2R 24575033..24575153 1600..1720 100 -> Plus
2R 24575213..24575432 1721..1940 100 -> Plus
2R 24575501..24575720 1941..2160 100   Plus
2R 24572886..24572924 1..39 100 -> Plus

LD39850.pep Sequence

Translation from 173 to 2086

> LD39850.pep
MSDKTKEDLKRSAPEEENEPQEESVSSEKEAEGEEDAWIGPMPSEQSAPA
PAKKKKVLPYEHIYLENLPNAESYERSYMHRDVITHLVCTKTDFVVTASL
DGHIKFWKKGELGIEFVKHFRSHLVPIKSLTTNDSGTLLCSAATDQTAKV
FDVVNFDMINIIRLGYTPQCSEWINGPGDAVQALAISDSESSRIHIYDGQ
GGGEALHTLEKLHSAPVVAMCLNVAMETVISVDRNGILEYWQNSKYDYKF
PQRLVNFDSKLDTSLFEFAKQKTQVTGLAATPDGKRFAAISTDRKVRVFQ
FNTGKLIRVFDEALSTYTQMQQTKHALPNMEFGRRMAAERDLEKTAQNAT
LNILFDSTGNFLLYPTMLGIKVINVVTNRCVTILGKTDNIRPLQVALFQG
RIKRQKAAITMEQEASENPALQNILNDPTAFCTAYKKSRFYLYSRRLPSD
LQDVDRDIFNEKPSKEDIIAVPEASVVQRIYENVVLHTTKGDIHMRLFFK
EVPKTVENFCVHAKNGYYNGHIFHRVIKGFMVQTGDPTGTGTGGKSIWGS
DFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPTPWLDNKHTVFG
RVYRGMEVVLNICNSKANPKTDKPYDDIKIISIHLSN*

LD39850.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:06:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13630-PA 639 GF13630-PA 7..639 6..637 3075 92.7 Plus
Dana\GF25039-PA 175 GF25039-PA 22..168 484..631 427 54.1 Plus
Dana\GF11272-PA 517 GF11272-PA 282..429 484..632 383 47.7 Plus
Dana\GF13766-PA 161 GF13766-PA 3..155 484..634 368 49.7 Plus
Dana\GF25290-PA 496 GF25290-PA 15..133 484..602 343 52.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:06:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22984-PA 637 GG22984-PA 1..637 1..637 3421 98.4 Plus
Dere\GG14657-PA 176 GG14657-PA 23..169 484..631 429 54.1 Plus
Dere\GG22278-PA 517 GG22278-PA 282..429 484..632 393 49 Plus
Dere\GG24170-PA 161 GG24170-PA 3..155 484..634 365 49 Plus
Dere\GG21776-PA 205 GG21776-PA 43..184 491..630 333 52.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:06:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20004-PA 637 GH20004-PA 4..637 3..637 3047 89.3 Plus
Dgri\GH21768-PA 173 GH21768-PA 20..166 484..631 432 54.1 Plus
Dgri\GH19751-PA 513 GH19751-PA 281..426 484..630 395 49.7 Plus
Dgri\GH21257-PA 161 GH21257-PA 3..155 484..634 370 50.3 Plus
Dgri\GH15083-PA 499 GH15083-PA 15..133 484..602 348 53.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG3511-PB 637 CG3511-PB 1..637 1..637 3336 100 Plus
CG3511-PA 637 CG3511-PA 1..637 1..637 3336 100 Plus
Cypl-PA 176 CG13892-PA 23..169 484..631 425 54.1 Plus
CG7747-PA 517 CG7747-PA 282..429 484..632 382 49 Plus
CG11777-PA 161 CG11777-PA 2..155 483..634 365 49.4 Plus
CG10907-PA 502 CG10907-PA 15..133 484..602 327 52.9 Plus
CG2852-PD 205 CG2852-PD 16..184 469..630 319 46.8 Plus
CG2852-PA 205 CG2852-PA 16..184 469..630 319 46.8 Plus
Moca-cyp-PA 970 CG1866-PA 27..156 491..609 307 52.7 Plus
cyp33-PA 300 CG4886-PA 153..290 491..623 305 53.2 Plus
Cyp1-PA 227 CG9916-PA 81..205 491..612 303 56.3 Plus
CG7768-PB 164 CG7768-PB 5..142 479..612 295 51.1 Plus
CG7768-PA 164 CG7768-PA 5..142 479..612 295 51.1 Plus
ninaA-PA 237 CG3966-PA 24..187 475..637 285 44.4 Plus
CG5808-PA 653 CG5808-PA 2..156 483..630 272 40.4 Plus
CG17266-PB 183 CG17266-PB 19..171 480..624 266 43.9 Plus
CG17266-PA 183 CG17266-PA 19..171 480..624 266 43.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:06:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19185-PA 643 GI19185-PA 3..643 2..637 3063 89.7 Plus
Dmoj\GI22699-PA 173 GI22699-PA 20..166 484..631 433 54.1 Plus
Dmoj\GI20287-PA 517 GI20287-PA 281..426 484..630 389 49 Plus
Dmoj\GI19335-PA 180 GI19335-PA 22..174 484..634 376 51 Plus
Dmoj\GI13730-PA 507 GI13730-PA 15..133 484..602 357 54.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:06:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10223-PA 636 GL10223-PA 6..636 5..637 3066 90.2 Plus
Dper\GL22598-PA 175 GL22598-PA 22..168 484..631 426 53.4 Plus
Dper\GL11352-PA 517 GL11352-PA 276..427 476..630 389 48.4 Plus
Dper\GL17294-PA 161 GL17294-PA 2..155 483..634 367 49.4 Plus
Dper\GL20720-PA 503 GL20720-PA 15..133 484..602 332 51.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:06:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17492-PA 636 GA17492-PA 6..636 5..637 3070 90.4 Plus
Dpse\GA12606-PA 175 GA12606-PA 22..168 484..631 426 53.4 Plus
Dpse\GA20560-PA 517 GA20560-PA 276..427 476..630 389 48.4 Plus
Dpse\GA11192-PA 162 GA11192-PA 3..156 483..634 370 50 Plus
Dpse\GA10630-PA 503 GA10630-PA 15..133 484..602 332 51.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:06:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11877-PA 637 GM11877-PA 1..637 1..637 3430 98.9 Plus
Dsec\GM14273-PA 176 GM14273-PA 23..169 484..631 429 54.1 Plus
Dsec\GM20066-PA 517 GM20066-PA 282..429 484..632 393 49 Plus
Dsec\GM21220-PA 161 GM21220-PA 3..155 484..634 368 49.7 Plus
Dsec\GM15627-PA 205 GM15627-PA 27..184 476..630 331 46.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:06:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11875-PA 637 GD11875-PA 1..637 1..637 3439 99.2 Plus
Dsim\GD25702-PA 176 GD25702-PA 23..169 484..631 429 54.1 Plus
Dsim\GD10743-PA 161 GD10743-PA 3..155 484..634 368 49.7 Plus
Dsim\GD14329-PA 502 GD14329-PA 15..133 484..602 343 52.9 Plus
Dsim\GD25116-PA 203 GD25116-PA 25..182 476..630 331 46.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:06:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20247-PA 471 GJ20247-PA 7..348 6..348 1603 85.7 Plus
Dvir\GJ20247-PA 471 GJ20247-PA 340..471 500..637 602 88.4 Plus
Dvir\GJ23427-PA 173 GJ23427-PA 20..166 484..631 434 54.7 Plus
Dvir\GJ15535-PA 281 GJ15535-PA 45..190 484..630 390 49 Plus
Dvir\GJ22016-PA 517 GJ22016-PA 281..426 484..630 390 49 Plus
Dvir\GJ22213-PA 182 GJ22213-PA 16..176 476..634 381 48.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:06:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12669-PA 639 GK12669-PA 7..639 6..637 2968 87.6 Plus
Dwil\GK20536-PA 174 GK20536-PA 4..167 469..631 425 49.7 Plus
Dwil\GK18005-PA 171 GK18005-PA 13..165 484..634 371 49.7 Plus
Dwil\GK20914-PA 520 GK20914-PA 282..427 484..630 371 48.3 Plus
Dwil\GK16511-PA 165 GK16511-PA 19..143 491..612 318 57.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:06:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14421-PA 637 GE14421-PA 1..637 1..637 3406 98 Plus
Dyak\GE21017-PA 176 GE21017-PA 23..169 484..631 430 54.1 Plus
Dyak\GE14073-PA 517 GE14073-PA 282..429 484..632 392 49 Plus
Dyak\GE19364-PA 161 GE19364-PA 3..155 484..634 368 49.7 Plus
Dyak\GE11851-PA 205 GE11851-PA 43..184 491..630 328 50.7 Plus

LD39850.hyp Sequence

Translation from 173 to 2086

> LD39850.hyp
MSDKTKEDLKRSAPEEENEPQEESVSSEKEAEGEEDAWIGPMPSEQSAPA
PAKKKKVLPYEHIYLENLPNAESYERSYMHRDVITHLVCTKTDFVVTASL
DGHIKFWKKGELGIEFVKHFRSHLVPIKSLTTNDSGTLLCSAATDQTAKV
FDVVNFDMINIIRLGYTPQCSEWINGPGDAVQALAISDSESSRIHIYDGQ
GGGEALHTLEKLHSAPVVAMCLNVAMETVISVDRNGILEYWQNSKYDYKF
PQRLVNFDSKLDTSLFEFAKQKTQVTGLAATPDGKRFAAISTDRKVRVFQ
FNTGKLIRVFDEALSTYTQMQQTKHALPNMEFGRRMAAERDLEKTAQNAT
LNILFDSTGNFLLYPTMLGIKVINVVTNRCVTILGKTDNIRPLQVALFQG
RIKRQKAAITMEQEASENPALQNILNDPTAFCTAYKKSRFYLYSRRLPSD
LQDVDRDIFNEKPSKEDIIAVPEASVVQRIYENVVLHTTKGDIHMRLFFK
EVPKTVENFCVHAKNGYYNGHIFHRVIKGFMVQTGDPTGTGTGGKSIWGS
DFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPTPWLDNKHTVFG
RVYRGMEVVLNICNSKANPKTDKPYDDIKIISIHLSN*

LD39850.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:18:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG3511-PB 637 CG3511-PB 1..637 1..637 3336 100 Plus
CG3511-PA 637 CG3511-PA 1..637 1..637 3336 100 Plus
Cypl-PA 176 CG13892-PA 23..169 484..631 425 54.1 Plus
CG7747-PA 517 CG7747-PA 282..429 484..632 382 49 Plus
CG11777-PA 161 CG11777-PA 2..155 483..634 365 49.4 Plus