Clone LD39904 Report

Search the DGRC for LD39904

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:399
Well:4
Vector:pOT2
Associated Gene/TranscriptCG31108-RA
Protein status:LD39904.pep: gold
Preliminary Size:3120
Sequenced Size:3273

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31108 2002-05-20 Blastp of sequenced clone
CG31108 2008-04-29 Release 5.5 accounting
CG31108 2008-08-15 Release 5.9 accounting
CG31510 2008-08-15 Release 5.9 accounting
CG31108 2008-12-18 5.12 accounting
CG31510 2008-12-18 5.12 accounting

Clone Sequence Records

LD39904.complete Sequence

3273 bp (3273 high quality bases) assembled on 2002-05-20

GenBank Submission: AY118563

> LD39904.complete
AGGAGAACAACTTTTGGGCCCGTAGAGACAAATGTGACATTTGTTTCTTT
GATGCGTTGCCATCGAAATTCTCTGTCCTCTTCGGCCTGATGCAAGTAAT
AAATTTAAGTAAAGGCAAATTATCCTTGTAATTGAAAGCGAGTCCATCGT
GAATTGTGGCCATTGCGTACCGAACCGCGAGAGAGCAGACGAGCGAAGCA
GCGACTGTCATCGAATTGGAATATTGGAAGCGACGAAGAGGAGAGGGATA
TCGAGCACCCAATAGCCCCCATCCACATTTACGTCCAACGGGCCCCCAAG
TATTTGCAAGTGGTTAGAGGGCCGCGTTTGCGTTTCGCCGAAGTCGTTAT
GCCTTCTTCATTGTGTGAAGCTCTCACAAATTCTTCAATCAGTTTCGATT
ATCAAAAAGAAGATGATTGGATTACGAGTGGAAAGCTTGGTTCGCGAGAA
GCAGTTTTGGTTTTCAGAACGAATATTCTTAATCCGAAAATCCGGAAAAC
ATTGTCTGAGAAGTCCTCTGCACAAGTGTTAACGGACACGAAGGATAATG
AGGAGAAGCCCGTTCAAAGCCCACAAAAACTGGCGGAAGAAGAACCCACT
TCTTCGGAACCGAGTAGCAAGGAAGCTCTAAGCGGTTCAACGCAACAAAA
GATATTTTTATTGAAAAAACCGCAACAATGTGATAAATCGGATAAATTAA
CTTTTTCTAGCCCTTTTAAGAAGATACTTAACCGATATTCCTCGAGTGAT
ACGTCCATTTCAAGTGAAGGTGAAGAGCCTGCAAATAGTAGTGAAAACAA
ATCGCGTGTACTTAAAACCAGTCAGAATGCCATTAATATTAAACTAGCTA
CCGACTTATCGAATGAGAGTGGATACGAATCCATAGCACCTGCCAAAACA
ATTTCAAATACTGAAGTAATCGAAGAAGATCAGGAGGAGACGAGCGAGGA
CGATGCCGAGTGTGGGATAAACATGCCTGCCTCCAAACTCAAAATTACCT
ACAAATTCCATCAAACGGAAACCAAGTTGCTTCGAAAGCTCTTTAATGTC
CATGGCCTTACTGAAGTTCAGGGTGAAAATAATAACTTTAATTTACTCTG
GACGGGTGTTCATATGAAATTAGATATTGTTAGAAATTTGGCGCCGTATC
AGAGGGTTAATCATTTCCCTAGGTCCTACGAAATGACACGAAAGGATCGA
CTATATAAAAACATCGAACGCATGCAACATCTTCGGGGTATGAAGCATTT
TGATATTGTGCCACAAACATTCGTTCTGCCAATCGAATCCCGAGATTTAG
TAGTAGCCCACAACAAGCATCGCGGACCATGGATAGTTAAGCCAGCGGCA
TCCAGTCGAGGAAGGGGAATATTTATTGTTAATTCGCCAGATCAAATACC
TCAAGATGAGCAGGCGGTGGTGTCGAAATATATAGTGGATCCGCTGTGCA
TTGATGGTCACAAATGTGATTTGAGGGTATACGTTCTAGTCACTTCCTTC
GATCCCCTAATTATTTATTTATATGAAGAGGGCATTGTGAGATTGGCCAC
AGTCAAGTATGACAGGCATGCCGATAACCTGTGGAACCCGTGCATGCATC
TCTGCAATTACAGCATTAACAAATACCATTCTGATTACATAAGGAGCTCC
GATGCTCAGGATGAGGATGTAGGCCATAAGTGGACGTTGTCCGCTCTTTT
AAGGCACCTGAAACTCCAGAGTTGTGATACACGTCAGCTAATGCTGAATA
TTGAGGATTTAATTATTAAAGCTGTGCTAGCCTGTGCTCAATCTATTATT
TCGGCCTGCAGGATGTTCGTTCCCAATGGAAATAACTGCTTTGAGCTGTA
TGGATTCGATATATTAATAGACAACGCACTTAAGCCATGGCTACTGGAAA
TCAATCTATCGCCGTCAATGGGTGTGGATAGTCCTTTGGACACTAAGGTG
AAGTCATGTCTGATGGCAGACCTATTGACGTGTGTGGGCATTCCAGCCTA
TAGTCCCGAAATGAAATCTCATTATGACCAGAAATGGTCGCGTTTCCGCA
GCTCAAGCTGCCAAAGGATAGCAACTTTTCCCAGTACCTCGCAAAAGACA
AAGAAGTCGAAGAAAAAAGGAGCTGCCATTAATCTTAATCTAACCGGCGA
AGAGCAGCGCATATTGCGCAATGCACGCCTACAGTATTCTCGTCGTGGAG
GATTCGTGCGCATCTTTCCCACAGATGACTCAATGCAGCGGTATGGTAAT
TTCCTTGATTCTGCTAATGGCATTCCGATCTCCACACCAAATGTACAGAG
TCAGACATTCCAAACGCCGATTATACAGCACAACTACAACCAGATGCTTC
ACCAAAATTTATACTCCAAGGACGGCCGGCAAAAGCAGGACGATAATAAT
GAAGCTGATCGGATTTGGCAATACGAAAGGGCTTTGGAAACCGATTCGGA
AATTCCATTTGTCAAGAAGCCCACAGTTGAGAAGTGCGAAGTGGAGGGGA
GGCGGTTGCGGAAGATCATGCTCAAGAAAATATCCAATGGGTCAGAGCTG
ACGCCTTTTCAAGCGCGTCAGACGTTCAGCATGTACTTGGAATCGGTTCT
TCGGCGGCTTACCGAAGATCCGAAAGACAATCACGAGAAAATAATACTTA
AGTTTTTGAACAAGTTCGGCGGATCTGTAAAGCCGCCAGTCATGTTCCGG
AATATGCAAACCATCAAGGTGGCCAGCAAAGCCCGATCCGCAATGGTGGC
GAAACTTCTTGGTGACTTTCTGGAGAACTACAAAAGAGATACAGAGGCGT
ATGTGGACTCGTTCGATCACTTCGGAATGATTCCATCCAGCGCCTACAAT
CAGTTCTTGATGCACGCCCAGGAGTCCGATTTGGAGGCAGTGCTGACACT
TCACACCAATGTGACCGGTATCATGCCCTTCCTGTACAACCGATGTGGAC
TGTCAGTGCCACCCACTCCCCCGATTCCGTCTGGCTTGCATGGCTTTTTG
AGAGCCCTGCCCTCCATGGTATCCTCCACTGGCATCAACAGGGAGCTCAG
CAAGTACGATGGATACTTCAAGAACTTCGACAAGGAGAAGGTATTTCTAT
GAAGCCCGAAATCGATGGGAGAGGTTTTTAATCTAAATAGCTAATTTGTC
AAGCTTTTGTCCAGTCATCCTATTGTAGTAAGTCTAATTATTTTTGTATT
CAAATTTTCGCATCAAGGCAGAGGCTTACACAAATAAATATTTATCGATA
AACAAAAAAAAAAAAAAAAAAAA

LD39904.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:59:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG31108-RA 3454 CG31108-RA 10..3264 1..3255 16275 100 Plus
CG31510-RA 4071 CG31510-RA 10..349 1..340 1700 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:23:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 20936209..20938076 3253..1386 9265 99.7 Minus
chr3R 27901430 chr3R 20938405..20939192 1174..387 3940 100 Minus
chr3R 27901430 chr3R 20945713..20946052 340..1 1700 100 Minus
chr3R 27901430 chr3R 20938131..20938346 1386..1171 1080 100 Minus
chr3R 27901430 chr3R 20939264..20939310 386..340 235 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:34:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:23:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25113055..25114924 3255..1386 9350 100 Minus
3R 32079331 3R 25115253..25116040 1174..387 3940 100 Minus
3R 32079331 3R 25122561..25122900 340..1 1700 100 Minus
3R 32079331 3R 25114979..25115194 1386..1171 1080 100 Minus
3R 32079331 3R 25116112..25116158 386..340 235 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:31:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 24853886..24855755 3255..1386 9350 100 Minus
3R 31820162 3R 24856084..24856871 1174..387 3940 100 Minus
3R 31820162 3R 24863392..24863731 340..1 1700 100 Minus
3R 31820162 3R 24855810..24856025 1386..1171 1080 100 Minus
3R 31820162 3R 24856943..24856989 386..340 235 100 Minus
Blast to na_te.dros performed 2019-03-16 04:23:50
Subject Length Description Subject Range Query Range Score Percent Strand
copia 5143 copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). 2611..2693 806..885 120 62.7 Plus
copia 5143 copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). 2719..2801 806..885 120 62.7 Plus

LD39904.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:24:46 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 20936209..20938075 1387..3253 99 <- Minus
chr3R 20938131..20938344 1173..1386 100 <- Minus
chr3R 20938407..20939192 387..1172 100 <- Minus
chr3R 20939264..20939309 341..386 100 <- Minus
chr3R 20945713..20946052 1..340 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:22:08 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
CG31108-RA 1..2754 349..3102 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:39:00 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
CG31108-RA 1..2754 349..3102 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:28:12 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
CG31108-RA 1..2754 349..3102 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:30:47 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
CG31108-RA 1..2754 349..3102 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:37:59 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
CG31108-RA 1..2754 349..3102 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:12:06 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
CG31108-RA 10..3262 1..3253 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:39:00 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
CG31108-RA 10..3262 1..3253 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:28:12 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
CG31108-RA 21..3273 1..3253 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:30:47 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
CG31108-RA 10..3262 1..3253 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:37:59 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
CG31108-RA 21..3273 1..3253 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:24:46 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25113057..25114923 1387..3253 100 <- Minus
3R 25114979..25115192 1173..1386 100 <- Minus
3R 25115255..25116040 387..1172 100 <- Minus
3R 25116112..25116157 341..386 100 <- Minus
3R 25122561..25122900 1..340 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:24:46 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25113057..25114923 1387..3253 100 <- Minus
3R 25114979..25115192 1173..1386 100 <- Minus
3R 25115255..25116040 387..1172 100 <- Minus
3R 25116112..25116157 341..386 100 <- Minus
3R 25122561..25122900 1..340 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:24:46 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25113057..25114923 1387..3253 100 <- Minus
3R 25114979..25115192 1173..1386 100 <- Minus
3R 25115255..25116040 387..1172 100 <- Minus
3R 25116112..25116157 341..386 100 <- Minus
3R 25122561..25122900 1..340 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:28:12 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20938779..20940645 1387..3253 100 <- Minus
arm_3R 20940701..20940914 1173..1386 100 <- Minus
arm_3R 20940977..20941762 387..1172 100 <- Minus
arm_3R 20941834..20941879 341..386 100 <- Minus
arm_3R 20948283..20948622 1..340 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:03:19 Download gff for LD39904.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24853888..24855754 1387..3253 100 <- Minus
3R 24855810..24856023 1173..1386 100 <- Minus
3R 24856086..24856871 387..1172 100 <- Minus
3R 24856943..24856988 341..386 100 <- Minus
3R 24863392..24863731 1..340 100   Minus

LD39904.pep Sequence

Translation from 348 to 3101

> LD39904.pep
MPSSLCEALTNSSISFDYQKEDDWITSGKLGSREAVLVFRTNILNPKIRK
TLSEKSSAQVLTDTKDNEEKPVQSPQKLAEEEPTSSEPSSKEALSGSTQQ
KIFLLKKPQQCDKSDKLTFSSPFKKILNRYSSSDTSISSEGEEPANSSEN
KSRVLKTSQNAINIKLATDLSNESGYESIAPAKTISNTEVIEEDQEETSE
DDAECGINMPASKLKITYKFHQTETKLLRKLFNVHGLTEVQGENNNFNLL
WTGVHMKLDIVRNLAPYQRVNHFPRSYEMTRKDRLYKNIERMQHLRGMKH
FDIVPQTFVLPIESRDLVVAHNKHRGPWIVKPAASSRGRGIFIVNSPDQI
PQDEQAVVSKYIVDPLCIDGHKCDLRVYVLVTSFDPLIIYLYEEGIVRLA
TVKYDRHADNLWNPCMHLCNYSINKYHSDYIRSSDAQDEDVGHKWTLSAL
LRHLKLQSCDTRQLMLNIEDLIIKAVLACAQSIISACRMFVPNGNNCFEL
YGFDILIDNALKPWLLEINLSPSMGVDSPLDTKVKSCLMADLLTCVGIPA
YSPEMKSHYDQKWSRFRSSSCQRIATFPSTSQKTKKSKKKGAAINLNLTG
EEQRILRNARLQYSRRGGFVRIFPTDDSMQRYGNFLDSANGIPISTPNVQ
SQTFQTPIIQHNYNQMLHQNLYSKDGRQKQDDNNEADRIWQYERALETDS
EIPFVKKPTVEKCEVEGRRLRKIMLKKISNGSELTPFQARQTFSMYLESV
LRRLTEDPKDNHEKIILKFLNKFGGSVKPPVMFRNMQTIKVASKARSAMV
AKLLGDFLENYKRDTEAYVDSFDHFGMIPSSAYNQFLMHAQESDLEAVLT
LHTNVTGIMPFLYNRCGLSVPPTPPIPSGLHGFLRALPSMVSSTGINREL
SKYDGYFKNFDKEKVFL*

LD39904.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:59:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17100-PA 925 GF17100-PA 1..925 1..917 4122 84.6 Plus
Dana\GF15840-PA 1097 GF15840-PA 614..1052 226..638 629 33.6 Plus
Dana\GF15040-PA 1003 GF15040-PA 455..796 203..543 590 37.1 Plus
Dana\GF11726-PA 862 GF11726-PA 134..665 214..746 535 30 Plus
Dana\GF18720-PA 737 GF18720-PA 186..602 243..644 518 33.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:59:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12287-PA 917 GG12287-PA 1..917 1..917 4675 95.6 Plus
Dere\GG23690-PA 1068 GG23690-PA 575..1013 226..638 637 34.3 Plus
Dere\GG24974-PA 988 GG24974-PA 442..783 203..543 595 37.9 Plus
Dere\GG12126-PA 692 GG12126-PA 141..476 210..546 524 35.8 Plus
Dere\GG21987-PA 869 GG21987-PA 132..463 214..546 518 34.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18049-PA 921 GH18049-PA 1..902 1..912 3454 72.4 Plus
Dgri\GH10972-PA 1078 GH10972-PA 601..1039 226..638 627 33.9 Plus
Dgri\GH11195-PA 971 GH11195-PA 420..761 203..543 594 37.3 Plus
Dgri\GH16662-PA 706 GH16662-PA 168..471 243..546 529 37.2 Plus
Dgri\GH22556-PA 835 GH22556-PA 133..626 214..691 520 29.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:36:47
Subject Length Description Subject Range Query Range Score Percent Strand
TTLL5-PB 917 CG31108-PB 1..917 1..917 4776 100 Plus
TTLL5-PA 917 CG31108-PA 1..917 1..917 4776 100 Plus
TTLL4A-PM 827 CG16833-PM 334..772 226..638 616 33.9 Plus
TTLL4A-PK 827 CG16833-PK 334..772 226..638 616 33.9 Plus
TTLL4A-PF 828 CG16833-PF 334..772 226..638 616 33.9 Plus
TTLL4A-PE 828 CG16833-PE 334..772 226..638 616 33.9 Plus
TTLL4A-PN 1070 CG16833-PN 577..1015 226..638 616 33.9 Plus
TTLL4A-PL 1070 CG16833-PL 577..1015 226..638 616 33.9 Plus
TTLL4A-PI 1070 CG16833-PI 577..1015 226..638 616 33.9 Plus
TTLL4A-PH 1071 CG16833-PH 577..1015 226..638 616 33.9 Plus
TTLL4A-PG 1071 CG16833-PG 577..1015 226..638 616 33.9 Plus
TTLL4A-PD 1071 CG16833-PD 577..1015 226..638 616 33.9 Plus
TTLL4B-PA 982 CG3964-PA 443..784 203..543 577 37.1 Plus
TTLL4B-PC 989 CG3964-PC 443..784 203..543 577 37.1 Plus
TTLL4B-PB 989 CG3964-PB 443..784 203..543 577 37.1 Plus
TTLL6B-PA 720 CG5987-PA 140..623 210..688 525 29.7 Plus
TTLL6A-PC 867 CG16716-PC 129..481 214..567 500 33.5 Plus
TTLL1A-PA 496 CG8918-PA 50..424 210..561 481 35.3 Plus
TTLL1B-PA 487 CG32238-PA 73..440 213..556 449 33.2 Plus
TTLL3A-PA 992 CG11323-PA 414..633 324..546 242 27 Plus
TTLL15-PA 516 CG4089-PA 107..475 242..624 222 24.2 Plus
TTLL3B-PB 756 CG11201-PB 246..618 194..546 198 22.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 03:59:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23779-PA 859 GI23779-PA 2..840 63..912 3363 74 Plus
Dmoj\GI18156-PA 818 GI18156-PA 306..765 206..638 614 33 Plus
Dmoj\GI18116-PA 994 GI18116-PA 449..790 203..543 585 37 Plus
Dmoj\GI21073-PA 885 GI21073-PA 138..619 214..707 549 30.2 Plus
Dmoj\GI22299-PA 714 GI22299-PA 177..584 243..644 539 33.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21939-PA 929 GL21939-PA 1..912 1..913 3772 78.1 Plus
Dper\GL19014-PA 1052 GL19014-PA 557..877 226..546 622 38.1 Plus
Dper\GL18685-PA 977 GL18685-PA 431..769 203..543 580 37.1 Plus
Dper\GL10350-PA 888 GL10350-PA 154..572 222..637 516 31.2 Plus
Dper\GL19844-PA 508 GL19844-PA 59..412 232..561 476 35 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16014-PA 929 GA16014-PA 1..912 1..913 3772 78.1 Plus
Dpse\GA17808-PA 983 GA17808-PA 434..775 203..543 593 37.3 Plus
Dpse\GA19278-PA 694 GA19278-PA 157..567 243..652 520 32 Plus
Dpse\GA14100-PA 886 GA14100-PA 155..573 222..637 520 31.6 Plus
Dpse\GA21409-PA 508 GA21409-PA 59..412 232..561 477 35 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:59:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17750-PA 918 GM17750-PA 1..918 1..917 4884 98.5 Plus
Dsec\GM18785-PA 559 GM18785-PA 56..504 216..638 625 33.1 Plus
Dsec\GM18444-PA 986 GM18444-PA 440..781 203..543 594 37.9 Plus
Dsec\GM10118-PA 718 GM10118-PA 140..476 210..547 523 35.7 Plus
Dsec\GM21973-PA 865 GM21973-PA 127..458 214..546 516 34.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:59:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18234-PA 931 GD18234-PA 1..879 1..875 4572 96.9 Plus
Dsim\GD23748-PA 1066 GD23748-PA 571..1010 226..638 618 33.2 Plus
Dsim\GD23261-PA 986 GD23261-PA 440..781 203..543 594 37.9 Plus
Dsim\GD15082-PA 698 GD15082-PA 140..475 210..546 523 35.8 Plus
Dsim\GD15693-PA 495 GD15693-PA 50..424 210..561 489 35.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:59:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23611-PA 901 GJ23611-PA 1..882 16..912 3544 75 Plus
Dvir\GJ14582-PA 1058 GJ14582-PA 561..999 226..638 630 34.1 Plus
Dvir\GJ16303-PA 1000 GJ16303-PA 449..790 203..543 588 37 Plus
Dvir\GJ20920-PA 876 GJ20920-PA 121..543 206..628 562 34 Plus
Dvir\GJ10485-PA 716 GJ10485-PA 182..586 247..644 543 33.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:59:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13885-PA 749 GK13885-PA 13..732 192..913 3350 84.9 Plus
Dwil\GK15248-PA 861 GK15248-PA 343..785 206..630 639 33.3 Plus
Dwil\GK15485-PA 1039 GK15485-PA 482..823 203..543 593 37.3 Plus
Dwil\GK22594-PA 719 GK22594-PA 178..583 243..644 535 33.1 Plus
Dwil\GK15880-PA 721 GK15880-PA 43..574 209..746 516 28.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:59:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10739-PA 917 GE10739-PA 1..917 1..917 4687 96.2 Plus
Dyak\GE18502-PA 1068 GE18502-PA 575..1013 226..638 634 34.1 Plus
Dyak\GE18264-PA 990 GE18264-PA 444..785 203..543 595 37.9 Plus
Dyak\GE10574-PA 720 GE10574-PA 140..631 210..696 528 30 Plus
Dyak\GE12065-PA 858 GE12065-PA 129..460 214..546 510 34.1 Plus

LD39904.hyp Sequence

Translation from 348 to 3101

> LD39904.hyp
MPSSLCEALTNSSISFDYQKEDDWITSGKLGSREAVLVFRTNILNPKIRK
TLSEKSSAQVLTDTKDNEEKPVQSPQKLAEEEPTSSEPSSKEALSGSTQQ
KIFLLKKPQQCDKSDKLTFSSPFKKILNRYSSSDTSISSEGEEPANSSEN
KSRVLKTSQNAINIKLATDLSNESGYESIAPAKTISNTEVIEEDQEETSE
DDAECGINMPASKLKITYKFHQTETKLLRKLFNVHGLTEVQGENNNFNLL
WTGVHMKLDIVRNLAPYQRVNHFPRSYEMTRKDRLYKNIERMQHLRGMKH
FDIVPQTFVLPIESRDLVVAHNKHRGPWIVKPAASSRGRGIFIVNSPDQI
PQDEQAVVSKYIVDPLCIDGHKCDLRVYVLVTSFDPLIIYLYEEGIVRLA
TVKYDRHADNLWNPCMHLCNYSINKYHSDYIRSSDAQDEDVGHKWTLSAL
LRHLKLQSCDTRQLMLNIEDLIIKAVLACAQSIISACRMFVPNGNNCFEL
YGFDILIDNALKPWLLEINLSPSMGVDSPLDTKVKSCLMADLLTCVGIPA
YSPEMKSHYDQKWSRFRSSSCQRIATFPSTSQKTKKSKKKGAAINLNLTG
EEQRILRNARLQYSRRGGFVRIFPTDDSMQRYGNFLDSANGIPISTPNVQ
SQTFQTPIIQHNYNQMLHQNLYSKDGRQKQDDNNEADRIWQYERALETDS
EIPFVKKPTVEKCEVEGRRLRKIMLKKISNGSELTPFQARQTFSMYLESV
LRRLTEDPKDNHEKIILKFLNKFGGSVKPPVMFRNMQTIKVASKARSAMV
AKLLGDFLENYKRDTEAYVDSFDHFGMIPSSAYNQFLMHAQESDLEAVLT
LHTNVTGIMPFLYNRCGLSVPPTPPIPSGLHGFLRALPSMVSSTGINREL
SKYDGYFKNFDKEKVFL*

LD39904.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:40:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG31108-PB 917 CG31108-PB 1..917 1..917 4776 100 Plus
CG31108-PA 917 CG31108-PA 1..917 1..917 4776 100 Plus
CG16833-PM 827 CG16833-PM 334..772 226..638 616 33.9 Plus
CG16833-PK 827 CG16833-PK 334..772 226..638 616 33.9 Plus
CG16833-PF 828 CG16833-PF 334..772 226..638 616 33.9 Plus