BDGP Sequence Production Resources |
Search the DGRC for LD39912
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 399 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3303-RA |
Protein status: | LD39912.pep: gold |
Preliminary Size: | 1741 |
Sequenced Size: | 1598 |
Gene | Date | Evidence |
---|---|---|
CG3303 | 2001-07-04 | Blastp of sequenced clone |
CG3303 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3303 | 2008-04-29 | Release 5.5 accounting |
CG3303 | 2008-08-15 | Release 5.9 accounting |
CG3303 | 2008-12-18 | 5.12 accounting |
1598 bp (1598 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051910
> LD39912.complete TCGGAAAGAGCAGATAAAACTCGATCAACGCGAGAGTTTTGGCTGAAGAT AAACGGCGAGCATCGGGAAAGTAAACAGAGGCGCAAAAACAAATGTTTGA CTAATCTTAATTGGATAATTATATCACAATGGACGCAGTGCAGCAGCAAA CAAACAGCACTAGCAACATCGACAGCGCCAAATGCCAGAAGCTAAAGAGA TTTGTGATCGTAGGCTTGCTGATCACCATTGGCATTTTGAGCTGGCACTT CTACGAGTACTTCCACAGCAAGCCGCTGCCCAAAACGCCGGATGACGTCT TGACCCTCTCGAAGAATCTGTACGCGGAGGAGACCGAGGTCAGTCCATAC CTCTACAAGGTGAATCTCCAGGGGAAGACCACTTCAGGTGCTCATGACGA TCGCGCCCCTAGAAACCTCTTTGAATTGCACCAGGATCTGCTGGCCAGGG ATGCTAACTCCACCACCGCTCTGCTAATGAGGCTCTTTGACAACTACGAG TTGGACGTGGCTGTGCAGGAGCATCCAACGCCGGAGCACGTCCAGGAGCA ATATGATTTCCTTAGGGCCGTGATGGGTACGCGTGTGATGAAGCTGACCA TGCGTTTTTTGGTACACAAGGATATTGTGAGCGTAGAATATGACGATCAG CTGCGTCTGCTGCAGGAGCTGTGGTTCACTCCCTACTCCAGAGGTCGTGG CATTGTGGGCAGTTCCAGTTTCGAGCACGTCTTCATGGCGGAGATTCGGG ACCAGAAGGTCCTGGGCTTGCATAACTGGCTGTACTTTGCAGATCAGGAG CAACGTGGCAATGTGGACTACAAGGGCTGGCTGAACCACAAGGAAATGGG AAAGCACAACCAAATGGTTCTCAGCGTTCGCTACACGTTTCACAACATCA ATAAGCCAGTCAACGGCTTCTTTGTGGGCATCTCGCCCGAACTGGACATG GCCCTGTACACCGCCTGCTTCCTGGCCACGGCGAAGGAGGAACCCTGCCA CATCCAGTTGGGTCATGCCTCCGCCACGATTGTCTCCCACGAATGGAAAT GGAACGGTATGCGCCTGATAGGAACCGTCTATCCGGACAGCTCCTAGATC ACTCCAACCACCCATCTCGCAACCTCAGTCAAATTACTGACATTCGATTC GGTCGCACTGTTACCTCATCGAAATCAGCAAAAGGCTAACCTCCAAGCTC AAAGTCAAGTTCATTTTATTTTGCCACTTTATGAGTGCTTGGCCCAGTTG TCGCTGGCAATTGACGAGGATGTCAGTCAGGACATGAACAATGCCCATCT GCCTATCATTTTGGTTGTTTTGACAGGATTGCGTGGCGCAGAGCACTTAC ATCACGAAGTTGTTTATTAGTTCTAACATTAATAGTTATTACTGGCGGAA ATTATGCAAGAGGCAAAAGCGTTTATTTTGAAGGAGCGAAAGGAGGAAAA GTGAGTGTGACGTTTTAGTATTATGCAGTCATTAAGCTCACCCTCGAAAT GGATTCTACCCACTATAATTTTTATACCTTTGAATCTCTTGAACTAGCTA GTTGAAAATAAAATAACAAAATCAACTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3303-RA | 1609 | CG3303-RA | 32..1609 | 1..1578 | 7890 | 100 | Plus |
CG31292-RA | 445 | CG31292-RA | 27..441 | 1..415 | 2075 | 100 | Plus |
CG2145-RA | 2085 | CG2145-RA | 1800..1851 | 921..972 | 155 | 86.5 | Plus |
CG2145-RA | 2085 | CG2145-RA | 1546..1615 | 664..733 | 140 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11734207..11734932 | 853..1578 | 3630 | 100 | Plus |
chr3R | 27901430 | chr3R | 11733030..11733284 | 1..255 | 1275 | 100 | Plus |
chr3R | 27901430 | chr3R | 11730852..11731106 | 1..255 | 1275 | 100 | Plus |
chr3R | 27901430 | chr3R | 11733912..11734145 | 621..854 | 1170 | 100 | Plus |
chr3R | 27901430 | chr3R | 11733650..11733855 | 416..621 | 1030 | 100 | Plus |
chr3R | 27901430 | chr3R | 11731165..11731325 | 255..415 | 805 | 100 | Plus |
chr3R | 27901430 | chr3R | 11733343..11733503 | 255..415 | 805 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15909642..15910368 | 853..1579 | 3635 | 100 | Plus |
3R | 32079331 | 3R | 15906273..15906527 | 1..255 | 1275 | 100 | Plus |
3R | 32079331 | 3R | 15908465..15908719 | 1..255 | 1275 | 100 | Plus |
3R | 32079331 | 3R | 15909347..15909580 | 621..854 | 1170 | 100 | Plus |
3R | 32079331 | 3R | 15909085..15909290 | 416..621 | 1030 | 100 | Plus |
3R | 32079331 | 3R | 15906586..15906746 | 255..415 | 805 | 100 | Plus |
3R | 32079331 | 3R | 15908778..15908938 | 255..415 | 805 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15650473..15651199 | 853..1579 | 3635 | 100 | Plus |
3R | 31820162 | 3R | 15649296..15649550 | 1..255 | 1275 | 100 | Plus |
3R | 31820162 | 3R | 15647104..15647358 | 1..255 | 1275 | 100 | Plus |
3R | 31820162 | 3R | 15650178..15650411 | 621..854 | 1170 | 100 | Plus |
3R | 31820162 | 3R | 15649916..15650121 | 416..621 | 1030 | 100 | Plus |
3R | 31820162 | 3R | 15649609..15649769 | 255..415 | 805 | 100 | Plus |
3R | 31820162 | 3R | 15647417..15647577 | 255..415 | 805 | 100 | Plus |
X | 23527363 | X | 10937553..10937604 | 921..972 | 155 | 86.5 | Plus |
X | 23527363 | X | 10937174..10937243 | 664..733 | 140 | 80 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11733030..11733284 | 1..255 | 100 | -> | Plus |
chr3R | 11733344..11733503 | 256..415 | 100 | -> | Plus |
chr3R | 11733650..11733855 | 416..621 | 100 | -> | Plus |
chr3R | 11733913..11734145 | 622..854 | 100 | -> | Plus |
chr3R | 11734209..11734932 | 855..1578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3303-RA | 1..969 | 129..1097 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3303-RA | 1..969 | 129..1097 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3303-RA | 1..969 | 129..1097 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3303-RA | 1..969 | 129..1097 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3303-RA | 1..969 | 129..1097 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3303-RA | 32..1609 | 1..1578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3303-RA | 32..1609 | 1..1578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3303-RA | 32..1609 | 1..1578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3303-RA | 32..1609 | 1..1578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3303-RA | 68..1645 | 1..1578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15909348..15909580 | 622..854 | 100 | -> | Plus |
3R | 15908465..15908719 | 1..255 | 100 | -> | Plus |
3R | 15908779..15908938 | 256..415 | 100 | -> | Plus |
3R | 15909085..15909290 | 416..621 | 100 | -> | Plus |
3R | 15909644..15910367 | 855..1578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15909348..15909580 | 622..854 | 100 | -> | Plus |
3R | 15908465..15908719 | 1..255 | 100 | -> | Plus |
3R | 15908779..15908938 | 256..415 | 100 | -> | Plus |
3R | 15909085..15909290 | 416..621 | 100 | -> | Plus |
3R | 15909644..15910367 | 855..1578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15909348..15909580 | 622..854 | 100 | -> | Plus |
3R | 15908465..15908719 | 1..255 | 100 | -> | Plus |
3R | 15908779..15908938 | 256..415 | 100 | -> | Plus |
3R | 15909085..15909290 | 416..621 | 100 | -> | Plus |
3R | 15909644..15910367 | 855..1578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11734807..11735012 | 416..621 | 100 | -> | Plus |
arm_3R | 11735070..11735302 | 622..854 | 100 | -> | Plus |
arm_3R | 11734187..11734441 | 1..255 | 100 | -> | Plus |
arm_3R | 11734501..11734660 | 256..415 | 100 | -> | Plus |
arm_3R | 11735366..11736089 | 855..1578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15649296..15649550 | 1..255 | 100 | -> | Plus |
3R | 15649610..15649769 | 256..415 | 100 | -> | Plus |
3R | 15649916..15650121 | 416..621 | 100 | -> | Plus |
3R | 15650179..15650411 | 622..854 | 100 | -> | Plus |
3R | 15650475..15651198 | 855..1578 | 100 | Plus |
Translation from 128 to 1096
> LD39912.pep MDAVQQQTNSTSNIDSAKCQKLKRFVIVGLLITIGILSWHFYEYFHSKPL PKTPDDVLTLSKNLYAEETEVSPYLYKVNLQGKTTSGAHDDRAPRNLFEL HQDLLARDANSTTALLMRLFDNYELDVAVQEHPTPEHVQEQYDFLRAVMG TRVMKLTMRFLVHKDIVSVEYDDQLRLLQELWFTPYSRGRGIVGSSSFEH VFMAEIRDQKVLGLHNWLYFADQEQRGNVDYKGWLNHKEMGKHNQMVLSV RYTFHNINKPVNGFFVGISPELDMALYTACFLATAKEEPCHIQLGHASAT IVSHEWKWNGMRLIGTVYPDSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18549-PA | 323 | GF18549-PA | 1..323 | 1..322 | 1458 | 83 | Plus |
Dana\GF16037-PA | 152 | GF16037-PA | 1..143 | 44..186 | 677 | 88.8 | Plus |
Dana\GF20477-PA | 592 | GF20477-PA | 331..591 | 55..320 | 590 | 42.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16962-PA | 322 | GG16962-PA | 1..322 | 1..322 | 1637 | 93.2 | Plus |
Dere\GG18381-PA | 592 | GG18381-PA | 329..591 | 53..320 | 589 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23462-PA | 324 | GH23462-PA | 1..318 | 1..318 | 1181 | 70.8 | Plus |
Dgri\GH12680-PA | 676 | GH12680-PA | 415..675 | 55..320 | 557 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
EndoU-PA | 322 | CG3303-PA | 1..322 | 1..322 | 1711 | 100 | Plus |
CG2145-PB | 592 | CG2145-PB | 329..591 | 53..320 | 561 | 42.8 | Plus |
CG2145-PA | 592 | CG2145-PA | 329..591 | 53..320 | 561 | 42.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22951-PA | 327 | GI22951-PA | 18..323 | 13..318 | 1121 | 70.6 | Plus |
Dmoj\GI16258-PA | 637 | GI16258-PA | 376..636 | 55..320 | 557 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22078-PA | 325 | GL22078-PA | 1..323 | 1..321 | 1431 | 82.4 | Plus |
Dper\GL18244-PA | 549 | GL18244-PA | 288..548 | 55..320 | 569 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27370-PA | 325 | GA27370-PA | 1..323 | 1..321 | 1431 | 82.4 | Plus |
Dpse\GA15266-PA | 615 | GA15266-PA | 354..614 | 55..320 | 569 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24268-PA | 322 | GM24268-PA | 1..322 | 1..322 | 1714 | 97.2 | Plus |
Dsec\GM11444-PA | 588 | GM11444-PA | 326..587 | 53..320 | 551 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16994-PA | 589 | GD16994-PA | 326..588 | 53..320 | 578 | 42.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23767-PA | 324 | GJ23767-PA | 1..320 | 1..318 | 1263 | 72.5 | Plus |
Dvir\GJ16723-PA | 618 | GJ16723-PA | 357..617 | 55..320 | 554 | 41 | Plus |
Translation from 128 to 1096
> LD39912.hyp MDAVQQQTNSTSNIDSAKCQKLKRFVIVGLLITIGILSWHFYEYFHSKPL PKTPDDVLTLSKNLYAEETEVSPYLYKVNLQGKTTSGAHDDRAPRNLFEL HQDLLARDANSTTALLMRLFDNYELDVAVQEHPTPEHVQEQYDFLRAVMG TRVMKLTMRFLVHKDIVSVEYDDQLRLLQELWFTPYSRGRGIVGSSSFEH VFMAEIRDQKVLGLHNWLYFADQEQRGNVDYKGWLNHKEMGKHNQMVLSV RYTFHNINKPVNGFFVGISPELDMALYTACFLATAKEEPCHIQLGHASAT IVSHEWKWNGMRLIGTVYPDSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3303-PA | 322 | CG3303-PA | 1..322 | 1..322 | 1711 | 100 | Plus |
CG2145-PB | 592 | CG2145-PB | 329..591 | 53..320 | 561 | 42.8 | Plus |
CG2145-PA | 592 | CG2145-PA | 329..591 | 53..320 | 561 | 42.8 | Plus |