Clone LD39923 Report

Search the DGRC for LD39923

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:399
Well:23
Vector:pOT2
Associated Gene/TranscriptAma-RA
Protein status:LD39923.pep: gold
Preliminary Size:1616
Sequenced Size:1563

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2198 2001-01-01 Release 2 assignment
CG2198 2001-07-04 Blastp of sequenced clone
CG2198 2003-01-01 Sim4 clustering to Release 3
Ama 2008-04-29 Release 5.5 accounting
Ama 2008-08-15 Release 5.9 accounting
Ama 2008-12-18 5.12 accounting

Clone Sequence Records

LD39923.complete Sequence

1563 bp (1563 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051911

> LD39923.complete
CGAACGCGAAGTGAAGCGCATTGAACCCACATTGAACTGAGAGATAGTCG
AGGAAAAAGAGTCACAAAATCAACAGCAACATCCTGTAAATAAACAGAAA
TACCAGACATGGCGCGTCTGCGGCTTCTAATCGGTCTTATATTCTGCCTT
GCGATCAGCTTGGATTCGGTGCTTAGTGCCCCAGTGATCAGCCAGATCAG
CAAGGACGTGGTGGCCAGTGTGGGCGACTCTGTGGAGTTCAACTGCACCG
TGGAGGAGGTGGGACAGCTCTCGGTGAGCTGGGCCAAGCGTCCCAGCGAG
TCGGACACCAACTCGGTGGTGCTCTCCATGCGGAATATCCTCAGTCTGCC
CGACCAGCGGTACAACGTAACGGTCACCGAAGGACCCAAGACCGGAAGTG
CCATTTACACCTTCCGCATTCAGAACATCGAAGTCAGTGACATGGGTCCG
TACGAGTGTCAGGTGCTTGTTTCGGCCACGGAGAAGGTGACCAAGAAGCT
GAGCCTGCAGATCAAGACCCCGCCGGTGATTGCGGAGAACACCCCCAAGA
GCACCCTGGTGACAGAGGGACAGAATCTGGAGCTGACCTGCCATGCCAAT
GGCTTTCCCAAGCCTACGATCTCCTGGGCCCGCGAGCATAATGCAGTGAT
GCCTGCCGGTGGCCATTTGCTGGCCGAACCAACTCTCCGGATTCGTTCCG
TGCACCGGATGGATCGCGGCGGCTACTACTGCATCGCGCAGAACGGAGAG
GGCCAGCCGGACAAGAGGTTGATCCGGGTCGAAGTGGAGTTCCGTCCGCA
GATTGCCGTCCAGAGGCCCAAGATCGCCCAAATGGTGTCCCATTCCGCGG
AGCTGGAGTGCTCCGTGCAGGGCTACCCGGCTCCGACTGTAGTTTGGCAC
AAGAATGGCGTGCCCCTGCAGTCTAGCCGGCACCACGAGGTGGCCAACAC
CGCCTCCTCCTCGGGAACCACAACCTCTGTGCTGCGCATCGATAGCGTGG
GCGAGGAGGACTTTGGGGACTACTACTGCAATGCCACCAATAAGCTGGGA
CACGCCGATGCGCGACTGCATCTCTTCCAGACCGTCATCCCAGTGCCCTC
CTTGTCGTAATAAGCCCTCAACGTCTGATTTCCATTCCCACGCAACAAGA
CTGGAACCCTCACTTTCTCCTCTCGTCTCGCTTTTTCGGCAATTCGCCAG
TCCGGATGCGGTCTGTGTTTATATTATTAATGATTCATTCAATTAGCTCC
CATTCAGACTTCATTATTTTCGGACACACTTGAGATCGAGCCACCGCTTG
TGCCTTATGAATTTTGCTCTGCATCCGTCGGCTTGTGCAAACACACATTA
ATATGCTTAAGTAAATAACGTTCTCTGATAAAGTTTAATCGGTCTTTTCC
TATGTGGTTGGGTTGGCTTGTATACGGTGTAAGTTAAATACCATGAGAGA
ATAAACACCTCTTGAAGCAACGAATTAAAGGGTTTGTCATTCAATAAAAC
TAAGCCAGGAGACAAGGCATTGTCAAAAGTAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA

LD39923.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
Ama.a 1879 Ama.a 185..1715 1..1531 7655 100 Plus
Ama.c 2204 Ama.c 185..1715 1..1531 7655 100 Plus
Ama-RA 1959 Ama-RA 265..1795 1..1531 7655 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:17:56
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 2589615..2591043 102..1530 7130 99.9 Plus
chr3R 27901430 chr3R 2589198..2589298 1..101 505 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:34:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:17:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6763833..6765262 102..1531 7150 100 Plus
3R 32079331 3R 6763416..6763516 1..101 505 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:51:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 6504664..6506093 102..1531 7150 100 Plus
3R 31820162 3R 6504247..6504347 1..101 505 100 Plus
Blast to na_te.dros performed on 2019-03-16 11:17:54 has no hits.

LD39923.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:18:58 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 2589198..2589298 1..101 100 -> Plus
chr3R 2589615..2591043 102..1530 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:22:10 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
Ama-RB 5..1026 89..1110 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:17:03 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
Ama-RB 5..1026 89..1110 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:38:12 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
Ama-RB 5..1026 89..1110 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:48:33 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
Ama-RB 5..1026 89..1110 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:10:54 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
Ama-RB 5..1026 89..1110 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:11:36 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
Ama-RA 11..1540 1..1530 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:17:03 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
Ama-RA 11..1540 1..1530 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:38:12 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
Ama-RA 11..1540 1..1530 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:48:33 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
Ama-RA 11..1540 1..1530 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:10:54 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
Ama-RA 13..1542 1..1530 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:18:58 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6763416..6763516 1..101 100 -> Plus
3R 6763833..6765261 102..1530 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:18:58 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6763416..6763516 1..101 100 -> Plus
3R 6763833..6765261 102..1530 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:18:58 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6763416..6763516 1..101 100 -> Plus
3R 6763833..6765261 102..1530 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:38:12 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2589138..2589238 1..101 100 -> Plus
arm_3R 2589555..2590983 102..1530 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:26:38 Download gff for LD39923.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6504247..6504347 1..101 100 -> Plus
3R 6504664..6506092 102..1530 100   Plus

LD39923.pep Sequence

Translation from 108 to 1109

> LD39923.pep
MARLRLLIGLIFCLAISLDSVLSAPVISQISKDVVASVGDSVEFNCTVEE
VGQLSVSWAKRPSESDTNSVVLSMRNILSLPDQRYNVTVTEGPKTGSAIY
TFRIQNIEVSDMGPYECQVLVSATEKVTKKLSLQIKTPPVIAENTPKSTL
VTEGQNLELTCHANGFPKPTISWAREHNAVMPAGGHLLAEPTLRIRSVHR
MDRGGYYCIAQNGEGQPDKRLIRVEVEFRPQIAVQRPKIAQMVSHSAELE
CSVQGYPAPTVVWHKNGVPLQSSRHHEVANTASSSGTTTSVLRIDSVGEE
DFGDYYCNATNKLGHADARLHLFQTVIPVPSLS*

LD39923.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:51:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17188-PA 334 GF17188-PA 1..334 1..333 1414 80.2 Plus
Dana\GF12514-PA 359 GF12514-PA 14..325 10..329 666 37.2 Plus
Dana\GF21699-PA 655 GF21699-PA 70..371 25..331 323 29.4 Plus
Dana\GF14310-PA 570 GF14310-PA 85..391 16..324 300 28.3 Plus
Dana\GF22082-PA 499 GF22082-PA 95..404 17..328 298 26.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:51:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13665-PA 333 GG13665-PA 1..333 1..333 1707 95.8 Plus
Dere\GG20306-PA 330 GG20306-PA 16..296 14..329 573 34.9 Plus
Dere\GG10188-PA 672 GG10188-PA 74..378 25..332 320 28.7 Plus
Dere\GG24291-PA 446 GG24291-PA 12..313 16..324 304 30.3 Plus
Dere\GG24289-PA 606 GG24289-PA 117..423 16..324 304 28.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:51:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18131-PA 337 GH18131-PA 29..336 23..333 1298 80.4 Plus
Dgri\GH13877-PA 391 GH13877-PA 26..327 25..331 320 28.8 Plus
Dgri\GH10699-PA 403 GH10699-PA 4..302 15..324 311 29.6 Plus
Dgri\GH10697-PA 567 GH10697-PA 97..388 25..324 304 28.3 Plus
Dgri\GH21969-PA 180 GH21969-PA 24..144 193..329 303 39.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:10
Subject Length Description Subject Range Query Range Score Percent Strand
Ama-PC 333 CG2198-PC 1..333 1..333 1713 100 Plus
Ama-PA 333 CG2198-PA 1..333 1..333 1713 100 Plus
Ama-PB 341 CG2198-PB 9..341 1..333 1713 100 Plus
Lac-PA 359 CG12369-PA 16..325 14..329 656 38.1 Plus
CG31814-PB 643 CG31814-PB 74..378 25..332 325 28.7 Plus
CG31814-PA 672 CG31814-PA 74..378 25..332 325 28.7 Plus
DIP-delta-PE 469 CG34391-PE 24..340 5..331 320 28.1 Plus
DIP-delta-PD 469 CG34391-PD 24..340 5..331 320 28.1 Plus
DIP-zeta-PC 512 CG31708-PC 105..419 17..333 308 26.6 Plus
DIP-zeta-PB 532 CG31708-PB 105..419 17..333 308 26.6 Plus
DIP-zeta-PA 532 CG31708-PA 105..419 17..333 308 26.6 Plus
CG34353-PB 566 CG34353-PB 74..360 15..322 308 28.6 Plus
CG34353-PA 566 CG34353-PA 74..360 15..322 308 28.6 Plus
CG34353-PC 581 CG34353-PC 74..360 15..322 308 28.6 Plus
DIP-eta-PB 450 CG14010-PB 39..336 16..324 305 29.7 Plus
DIP-eta-PD 450 CG14010-PD 39..336 16..324 305 29.7 Plus
DIP-theta-PA 606 CG31646-PA 130..420 25..323 303 26.7 Plus
DIP-epsilon-PA 467 CG42368-PA 43..353 17..328 298 25.6 Plus
DIP-alpha-PC 554 CG32791-PC 22..344 5..331 298 26.9 Plus
DIP-alpha-PA 554 CG32791-PA 22..344 5..331 298 26.9 Plus
CG45781-PA 548 CG45781-PA 63..354 38..328 289 25.7 Plus
DIP-beta-PG 534 CG42343-PG 71..389 3..328 286 24.9 Plus
klg-PA 545 CG6669-PA 112..375 36..322 286 29.7 Plus
DIP-beta-PF 555 CG42343-PF 71..410 3..328 270 24.1 Plus
DIP-beta-PC 555 CG42343-PC 71..410 3..328 270 24.1 Plus
DIP-iota-PB 376 CG11320-PB 10..316 4..317 265 26.5 Plus
DIP-gamma-PA 413 CG14521-PA 47..356 33..324 254 24 Plus
wrapper-PA 500 CG10382-PA 95..330 101..332 245 26.7 Plus
DIP-alpha-PB 432 CG32791-PB 22..222 138..331 240 29.1 Plus
trol-PAX 2853 CG33950-PAX 2187..2448 32..316 237 26.6 Plus
trol-PAG 3105 CG33950-PAG 2439..2700 32..316 237 26.6 Plus
trol-PAL 3728 CG33950-PAL 2160..2421 32..316 237 26.6 Plus
trol-PAS 3805 CG33950-PAS 2237..2498 32..316 237 26.6 Plus
trol-PAP 3806 CG33950-PAP 2238..2499 32..316 237 26.6 Plus
trol-PAY 3833 CG33950-PAY 2265..2526 32..316 237 26.6 Plus
trol-PAO 3887 CG33950-PAO 2319..2580 32..316 237 26.6 Plus
trol-PAI 3897 CG33950-PAI 2190..2451 32..316 237 26.6 Plus
trol-PAM 3967 CG33950-PAM 2399..2660 32..316 237 26.6 Plus
trol-PAV 3973 CG33950-PAV 2405..2666 32..316 237 26.6 Plus
trol-PAZ 3989 CG33950-PAZ 2421..2682 32..316 237 26.6 Plus
trol-PAW 4007 CG33950-PAW 2439..2700 32..316 237 26.6 Plus
trol-PAR 4150 CG33950-PAR 2582..2843 32..316 237 26.6 Plus
trol-PAN 4150 CG33950-PAN 2582..2843 32..316 237 26.6 Plus
trol-PAK 4176 CG33950-PAK 2608..2869 32..316 237 26.6 Plus
trol-PBA 4203 CG33950-PBA 2635..2896 32..316 237 26.6 Plus
trol-PAE 4223 CG33950-PAE 2655..2916 32..316 237 26.6 Plus
trol-PAQ 4299 CG33950-PAQ 2731..2992 32..316 237 26.6 Plus
trol-PAH 4411 CG33950-PAH 2843..3104 32..316 237 26.6 Plus
trol-PAF 4434 CG33950-PAF 2866..3127 32..316 237 26.6 Plus
trol-PAU 4451 CG33950-PAU 2883..3144 32..316 237 26.6 Plus
trol-PAT 4479 CG33950-PAT 2883..3144 32..316 237 26.6 Plus
trol-PAX 2853 CG33950-PAX 2002..2252 52..309 159 26.4 Plus
trol-PAG 3105 CG33950-PAG 2254..2504 52..309 159 26.4 Plus
trol-PAL 3728 CG33950-PAL 1975..2225 52..309 159 26.4 Plus
trol-PAS 3805 CG33950-PAS 2052..2302 52..309 159 26.4 Plus
trol-PAP 3806 CG33950-PAP 2053..2303 52..309 159 26.4 Plus
trol-PAY 3833 CG33950-PAY 2080..2330 52..309 159 26.4 Plus
trol-PAO 3887 CG33950-PAO 2134..2384 52..309 159 26.4 Plus
trol-PAI 3897 CG33950-PAI 2005..2255 52..309 159 26.4 Plus
trol-PAM 3967 CG33950-PAM 2214..2464 52..309 159 26.4 Plus
trol-PAV 3973 CG33950-PAV 2220..2470 52..309 159 26.4 Plus
trol-PAZ 3989 CG33950-PAZ 2236..2486 52..309 159 26.4 Plus
trol-PAW 4007 CG33950-PAW 2254..2504 52..309 159 26.4 Plus
trol-PAR 4150 CG33950-PAR 2397..2647 52..309 159 26.4 Plus
trol-PAN 4150 CG33950-PAN 2397..2647 52..309 159 26.4 Plus
trol-PAK 4176 CG33950-PAK 2423..2673 52..309 159 26.4 Plus
trol-PBA 4203 CG33950-PBA 2450..2700 52..309 159 26.4 Plus
trol-PAE 4223 CG33950-PAE 2470..2720 52..309 159 26.4 Plus
trol-PAQ 4299 CG33950-PAQ 2546..2796 52..309 159 26.4 Plus
trol-PAH 4411 CG33950-PAH 2658..2908 52..309 159 26.4 Plus
trol-PAF 4434 CG33950-PAF 2681..2931 52..309 159 26.4 Plus
trol-PAU 4451 CG33950-PAU 2698..2948 52..309 159 26.4 Plus
trol-PAT 4479 CG33950-PAT 2698..2948 52..309 159 26.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:51:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19672-PA 363 GI19672-PA 31..327 25..329 659 37.7 Plus
Dmoj\GI22890-PA 220 GI22890-PA 23..219 139..331 459 49.5 Plus
Dmoj\GI22890-PA 220 GI22890-PA 7..208 7..221 432 45.6 Plus
Dmoj\GI10093-PA 691 GI10093-PA 69..370 25..331 321 28.8 Plus
Dmoj\GI11243-PA 571 GI11243-PA 101..392 25..324 307 28.3 Plus
Dmoj\GI11247-PA 470 GI11247-PA 43..340 21..324 305 29.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:51:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21774-PA 329 GL21774-PA 26..329 25..333 1451 86.7 Plus
Dper\GL17135-PA 355 GL17135-PA 35..321 25..329 606 35.7 Plus
Dper\GL26643-PA 462 GL26643-PA 22..343 3..324 305 29.2 Plus
Dper\GL26641-PA 603 GL26641-PA 113..419 16..324 298 27.6 Plus
Dper\GL25539-PA 523 GL25539-PA 93..400 17..328 292 27.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\Ama-PB 329 GA15295-PB 25..329 24..333 1458 86.8 Plus
Dpse\GA11586-PA 360 GA11586-PA 30..326 25..329 661 37.4 Plus
Dpse\GA16498-PA 684 GA16498-PA 80..381 25..331 321 29.1 Plus
Dpse\GA23467-PA 453 GA23467-PA 3..314 10..331 310 28 Plus
Dpse\GA29001-PA 462 GA29001-PA 22..343 3..324 303 28.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10913-PA 333 GM10913-PA 1..333 1..333 1731 97 Plus
Dsec\GM25389-PA 675 GM25389-PA 74..378 25..332 319 28.7 Plus
Dsec\GM18009-PA 449 GM18009-PA 1..309 4..324 309 29.5 Plus
Dsec\GM21394-PA 173 GM21394-PA 19..139 192..329 308 39.9 Plus
Dsec\GM18007-PA 604 GM18007-PA 115..421 16..324 300 28 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Ama-PA 333 GD19894-PA 1..333 1..333 1746 97.9 Plus
Dsim\GD22051-PA 675 GD22051-PA 74..378 25..332 319 28.7 Plus
Dsim\GD10890-PA 173 GD10890-PA 19..139 192..329 308 39.9 Plus
Dsim\GD22639-PA 514 GD22639-PA 115..421 16..324 303 28 Plus
Dsim\GD20989-PA 481 GD20989-PA 48..311 36..322 290 30 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23304-PA 331 GJ23304-PA 7..331 5..333 1330 79 Plus
Dvir\GJ17840-PA 193 GJ17840-PA 7..192 5..194 706 73.2 Plus
Dvir\GJ15038-PA 365 GJ15038-PA 33..329 25..329 664 38 Plus
Dvir\GJ18366-PA 670 GJ18366-PA 64..365 25..331 321 28.8 Plus
Dvir\GJ12356-PA 423 GJ12356-PA 43..340 21..324 306 29.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:51:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12252-PA 330 GK12252-PA 1..330 4..333 1507 83.6 Plus
Dwil\GK22188-PA 352 GK22188-PA 3..318 5..329 661 37.1 Plus
Dwil\GK24547-PA 614 GK24547-PA 61..365 25..332 316 28.4 Plus
Dwil\GK15428-PA 950 GK15428-PA 545..840 18..324 305 29.2 Plus
Dwil\GK15428-PA 950 GK15428-PA 126..417 25..324 302 28 Plus
Dwil\GK11479-PA 492 GK11479-PA 41..327 15..322 296 29.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24882-PA 333 GE24882-PA 1..333 1..333 1714 96.4 Plus
Dyak\GE12466-PA 359 GE12466-PA 16..325 14..329 674 38.1 Plus
Dyak\GE11503-PA 661 GE11503-PA 74..378 25..332 318 28.7 Plus
Dyak\GE18986-PA 422 GE18986-PA 7..309 16..324 308 29.2 Plus
Dyak\GE18984-PA 573 GE18984-PA 84..390 16..324 301 28 Plus

LD39923.hyp Sequence

Translation from 108 to 1109

> LD39923.hyp
MARLRLLIGLIFCLAISLDSVLSAPVISQISKDVVASVGDSVEFNCTVEE
VGQLSVSWAKRPSESDTNSVVLSMRNILSLPDQRYNVTVTEGPKTGSAIY
TFRIQNIEVSDMGPYECQVLVSATEKVTKKLSLQIKTPPVIAENTPKSTL
VTEGQNLELTCHANGFPKPTISWAREHNAVMPAGGHLLAEPTLRIRSVHR
MDRGGYYCIAQNGEGQPDKRLIRVEVEFRPQIAVQRPKIAQMVSHSAELE
CSVQGYPAPTVVWHKNGVPLQSSRHHEVANTASSSGTTTSVLRIDSVGEE
DFGDYYCNATNKLGHADARLHLFQTVIPVPSLS*

LD39923.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:46:51
Subject Length Description Subject Range Query Range Score Percent Strand
Ama-PC 333 CG2198-PC 1..333 1..333 1713 100 Plus
Ama-PA 333 CG2198-PA 1..333 1..333 1713 100 Plus
Ama-PB 341 CG2198-PB 9..341 1..333 1713 100 Plus
Lac-PA 359 CG12369-PA 16..325 14..329 656 38.1 Plus
CG31814-PB 643 CG31814-PB 74..378 25..332 325 28.7 Plus