BDGP Sequence Production Resources |
Search the DGRC for LD39959
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 399 |
Well: | 59 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7979-RA |
Protein status: | LD39959.pep: gold |
Preliminary Size: | 2097 |
Sequenced Size: | 2116 |
Gene | Date | Evidence |
---|---|---|
CG7979 | 2001-01-01 | Release 2 assignment |
CG7979 | 2001-07-04 | Blastp of sequenced clone |
CG7979 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7979 | 2008-04-29 | Release 5.5 accounting |
CG7979 | 2008-08-15 | Release 5.9 accounting |
CG7979 | 2008-12-18 | 5.12 accounting |
2116 bp (2116 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051913
> LD39959.complete CTCCTGATAACGCAATTGTATTGTTTATATAGTTTCTAAAGCCGAACGAG AATGCAATGTGGCGATATCAGTTGCTGATAAGCACTGGAACCCTGCAGTA CACAACCCATAACCGACGATGACTGCCACCAAAAAGCGTCTGAAGATCGT TGCAGCCATCTCGCTGCTCCTCCTGCTCCTGGTCTACCTTTACCGAATGG CCAGCTTCTGCCCAAGCGGAAAGGTCGCCGTTTCCGTTCCCGGCGTCGAG GAGGTTCAGGCCAAATGGCCGCCCACGGAAAGTCCGCTACAAAGGAGCCT TCAGATGGCGTACGAGGAGCAGAGCTCTCTTATTCGAGAACAAAAGGCCG AACTCCAGCGCACAAGGGAGAATTTGGCCAGATTGGAGGAACAAGTTCGT AGCCTCCAGACCAGCACACCGCGCAAGTATCCGAAGGTTAAATACCTGAA CTATAAGAATCGCAAACGCATACTAATTACCGGAGGAGCTGGCTTCGTGG GCTCCCACTTGGTCGACGATCTGATGGTCCAGGGGCACGAGGTCATCGTG GTGGACAATTTCTTTACGGGACGCAAGCGAAATGTCGAGCACTGGCTGGG GCACGAGAACTTCGAGCTCATCCACCACGACATAGTGAATCCGCTTTTCA TCGAGATCGATGAGATCTACCACTTGGCATCGCCAGCCTCGCCACCGCAT TACATGTACAATCCGGTGAAGACCATCAAGACCAACACCATGGGCACGAT CAATGTACTGGGTCTGGCCAAGCGCGTGATGGCCAAGGTTTTGATAGCTA GCACTTCGGAAGTGTACGGCGATCCCACAGTGCATCCGCAGCCAGAAACA TACTGGGGACATGTAAACCCTATTGGACCGAGAGCCTGTTATGACGAGGG AAAGCGTGTCTCCGAGACGCTGAGCTATGCGTATGCCAAACAGGAGAAAG TGCAAGTCCGAGTGGCGCGCATCTTTAACACTTATGGACCGAGAATGCAT ATGAACGATGGACGAGTGGTGTCAAACTTTATACTTCAGGCGCTGAGGAA TGAAACCATTACGGTGTATGGAAATGGCAAACAAACGCGCTCCTTTCAGT ATGTTTCGGATCTGGTGGACGGAATGATAGCCCTAATGGCATCCAACTAC ACACAGCCGGTGAATTTAGGCAATCCTGTGGAGCAGACAATCGGCGAATT TGCCGAGATCATCAAGAAACTGGTCGGCGGGCCCAGTGTGATAAAGCAAT CGAAGGCCATGGAAGATGATCCGCAGCGCAGAAAACCGGACATAACTCGA GCCCGCCAGTTGCTCCATTGGGAGCCAAAGGTTCCCCTAGAGACTGGACT TCAGCGGACCATCTCCTACTTCCGCAACGAATTGGCGCGTAGCGATCGCT TTCAGGAAAGCTCCAACAAGTACTTTGATACACATACACCGTAGAATTAA TTGGGCTTAGCTCTAATTGGTGATGATGGAACGTCTCTAGTCTGCAAATG TAAATATGACCATCGTTAGCACTAATTGTAAGCCCTCAAGGACCACAGAA TACCTTTGTCATGGTTAATTTTTTGAAGTTTTGCGATATATCAGCCTATG TATGGATTAGGAAATAGTGATGTATAAATGCGATCAAATGCACTGAATTC TAGAAAACTAATTTGAATTTGTTTAGGAAAAGAAAATCCCCAAAGAATAC AGAACTTAGGGAGTATGGAAACAACAGTTACAAACGGTTTATTATTCACG GACGACATTGCTATTCTTTTGACCGCATGTGTACCACATAGACACAGAAT CACTGGGTTACATGACACTTAGAAACAGTATAATCCATTGTATTGTAGAA CCACTATCGTATTTTAAAAGTGCCCACAAATTCATACGTTACATCAGAAG GTTGCGGCATATACATATATCAGAACCAGTGAGAATTGAACAAATTATTG AAGATCTGTGACTCACAACTTTAGACACATAACACCTATATGCGCCTTTA ACCAGTGTAAGCACACCCCGATTCTAGAAGATAAGTAGGGTTTTCCAGTT GCTGTAGTTGGTAGTCCATTAAAAGAGATTTTTTCTGCGAACTAAAAAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 8174185..8175338 | 940..2093 | 5770 | 100 | Plus |
chr3L | 24539361 | chr3L | 8172892..8173654 | 1..763 | 3815 | 100 | Plus |
chr3L | 24539361 | chr3L | 8173719..8173902 | 761..944 | 920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8172892..8173652 | 1..761 | 100 | -> | Plus |
chr3L | 8173720..8173901 | 762..943 | 100 | -> | Plus |
chr3L | 8174189..8175338 | 944..2093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7979-RA | 1..1326 | 119..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7979-RA | 1..1326 | 119..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7979-RA | 1..1326 | 119..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7979-RA | 1..1326 | 119..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7979-RA | 1..1326 | 119..1444 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7979-RA | 1..2093 | 1..2093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7979-RA | 1..2093 | 1..2093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7979-RA | 1..2093 | 1..2093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7979-RA | 1..2093 | 1..2093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7979-RA | 1..2093 | 1..2093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8180923..8181683 | 1..761 | 100 | -> | Plus |
3L | 8181751..8181932 | 762..943 | 100 | -> | Plus |
3L | 8182220..8183369 | 944..2093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8180923..8181683 | 1..761 | 100 | -> | Plus |
3L | 8181751..8181932 | 762..943 | 100 | -> | Plus |
3L | 8182220..8183369 | 944..2093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8180923..8181683 | 1..761 | 100 | -> | Plus |
3L | 8181751..8181932 | 762..943 | 100 | -> | Plus |
3L | 8182220..8183369 | 944..2093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8174023..8174783 | 1..761 | 100 | -> | Plus |
arm_3L | 8174851..8175032 | 762..943 | 100 | -> | Plus |
arm_3L | 8175320..8176469 | 944..2093 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8174023..8174783 | 1..761 | 100 | -> | Plus |
3L | 8174851..8175032 | 762..943 | 100 | -> | Plus |
3L | 8175320..8176469 | 944..2093 | 100 | Plus |
Translation from 118 to 1443
> LD39959.hyp MTATKKRLKIVAAISLLLLLLVYLYRMASFCPSGKVAVSVPGVEEVQAKW PPTESPLQRSLQMAYEEQSSLIREQKAELQRTRENLARLEEQVRSLQTST PRKYPKVKYLNYKNRKRILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFT GRKRNVEHWLGHENFELIHHDIVNPLFIEIDEIYHLASPASPPHYMYNPV KTIKTNTMGTINVLGLAKRVMAKVLIASTSEVYGDPTVHPQPETYWGHVN PIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRMHMNDGRV VSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQPVNL GNPVEQTIGEFAEIIKKLVGGPSVIKQSKAMEDDPQRRKPDITRARQLLH WEPKVPLETGLQRTISYFRNELARSDRFQESSNKYFDTHTP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7979-PA | 441 | CG7979-PA | 1..441 | 1..441 | 2288 | 100 | Plus |
Translation from 118 to 1443
> LD39959.pep MTATKKRLKIVAAISLLLLLLVYLYRMASFCPSGKVAVSVPGVEEVQAKW PPTESPLQRSLQMAYEEQSSLIREQKAELQRTRENLARLEEQVRSLQTST PRKYPKVKYLNYKNRKRILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFT GRKRNVEHWLGHENFELIHHDIVNPLFIEIDEIYHLASPASPPHYMYNPV KTIKTNTMGTINVLGLAKRVMAKVLIASTSEVYGDPTVHPQPETYWGHVN PIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRMHMNDGRV VSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQPVNL GNPVEQTIGEFAEIIKKLVGGPSVIKQSKAMEDDPQRRKPDITRARQLLH WEPKVPLETGLQRTISYFRNELARSDRFQESSNKYFDTHTP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25098-PA | 436 | GF25098-PA | 1..435 | 1..438 | 2062 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14475-PA | 441 | GG14475-PA | 1..441 | 1..441 | 2207 | 95.9 | Plus |
Dere\GG14731-PA | 350 | GG14731-PA | 6..336 | 118..414 | 155 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15492-PA | 445 | GH15492-PA | 1..437 | 1..438 | 1956 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Uxs-PA | 441 | CG7979-PA | 1..441 | 1..441 | 2288 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16768-PA | 447 | GI16768-PA | 1..439 | 1..438 | 2010 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22533-PA | 454 | GL22533-PA | 2..446 | 1..438 | 2064 | 87 | Plus |
Dper\GL20702-PA | 688 | GL20702-PA | 344..662 | 118..402 | 152 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20738-PA | 454 | GA20738-PA | 2..446 | 1..438 | 2061 | 86.7 | Plus |
Dpse\GA11351-PA | 558 | GA11351-PA | 214..532 | 118..402 | 153 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25024-PA | 441 | GM25024-PA | 1..441 | 1..441 | 2323 | 98 | Plus |
Dsec\GM14349-PA | 350 | GM14349-PA | 6..336 | 118..414 | 152 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14057-PA | 441 | GD14057-PA | 1..441 | 1..441 | 2342 | 98.6 | Plus |
Dsim\GD13563-PA | 350 | GD13563-PA | 6..336 | 118..414 | 155 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12512-PA | 447 | GJ12512-PA | 1..439 | 1..438 | 1994 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11988-PA | 447 | GK11988-PA | 1..439 | 1..438 | 1973 | 84.3 | Plus |