Clone LD39963 Report

Search the DGRC for LD39963

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:399
Well:63
Vector:pOT2
Associated Gene/TranscriptNup160-RA
Protein status:LD39963.pep: gold
Sequenced Size:4394

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4738 2003-01-01 Sim4 clustering to Release 3
CG4738 2004-07-14 Blastp of sequenced clone
CG4738 2008-04-29 Release 5.5 accounting
CG4738 2008-08-15 Release 5.9 accounting
CG4738 2008-12-18 5.12 accounting

Clone Sequence Records

LD39963.complete Sequence

4394 bp assembled on 2006-11-09

GenBank Submission: BT015261

> LD39963.complete
TTTACGCCGGTGCCGCCAATAATTTTCCGTTTTCGTTGAGGTTTTTATAT
TAATTTGTTGTGCTAGCAAGATGCCCACATCCAAACTGCAAGCCAACATG
AGCTACCGCGAGGTCATACCGCGGAACCTCAGTCCGGCGGAGTGGATCGA
GGTGAAAATTAACACGGGAACCCAGAGCACTTTGCAGGATTTAAAAACCT
TCGAAACCTCCGGCGGCTATTGCTACAAGAATACGAAAAATGTTCAGACC
AGAAACCGTTTCATATATTGGCGGACATACCAGGATGTCCTGGAACTATC
AGAGGTTAGTTTGGACATCTCCCTGCAGAGGAATCACCTGCGTCTGCGAT
TCACCGACTCCGCTGTGCTGAATGTATCACTCACGGAGCAAGGTACATCC
GTCACCCTGCTGGTGGTCACGGTCAGCAGTGTGCATCGCTATGTGTTTCC
CTTGAAGGTCGCTGGGCAGGAAGGTGGCGCAGCTTCTCCAGAGGATCTGC
TATCCCAGTCCATTTTCTACGACGTCAATGACAAGATCAATGATCCCAGC
ACTTACTATGTCACGGATGGCTTTGGAACTATGCCCAACGCGGCTGTATC
GTACCTCACTCAAGACTCCCAGTCAGCCTACTTTGCGGTGGCGTATCAGA
GCAAACTACTGCTTCACGTTATGAAATGCTCCACCGGCCATACTATCACC
CACGAAATCAAGGAGCCGAAGCTAATGCCATGGTTTCTGTCGAATCTCAA
GGGTGCCCTCACCGGCCGCTCTGAAACGTTGGAGGCAGCCACGTCCATGG
CTTTCAGTGAAATCGGGGGGGAAATTTTCATTCTGGTTCTGTATCGCAAT
AATGAGCTGCGTCTATGGTCAGTGGATAACTTGCAGACTGTAGCCAGCAT
TAACTGCTCCACCGAACTGGGACAGGACTCAGCAGCTCAAGGACCACAAA
ACAGCCAGCTCCGAAAAATAAGCGATCAAAACTTCTGTCTATTTCTCTCG
CACAATTCCCGAGCTGAGTTTATATGCGTTAGCATAATGCCCGATGCCGA
CGATGCCAGCGTTATCAATTTGGTGCAGAACATGGTGCCGGCGCCGCAAA
CGGATTTGGTCGACTTCGATGCCACATCCTCGCACATCTGGGCCCTTTGG
AGCAACGCTGAAGGCGATTTCCATGTCTCGGCAGCATATTTTGCCTCCAA
CAACGCAATCAAATGGGTTTCGGCTGCTCTAGAACCGCCACCGGATCGGT
ATTGTCTCACCATGGAGCAGGGAGTGGATCCACGCGAAACTTACTGCAGC
TATATATTTCATCCTGGTCGATTTGACCGAAATGTAATTGCCAAGGCTTT
ATATATGTTCAGACGCGTTAACCTGCAATTCGATGTAAAGCAACTTTCCA
TGTCAGTGCTCAAGGAGCAGGTATGCCAGGCCGTGGAAGATGAAATCCAA
AACGAACTGAAAGACTTTGTGGTCACCGATGAGGAGTACTTGGAGATATC
CACTCGGCTGTGGGATCGCTTTTACTCCTGCTGCGAACAGTATCACATTA
AGCTTTCCGAGCCGACAGGACTCGCCGTTCTTGGTGGAATGGATGCAGTA
TGTTTGGTTAGAAGGCAATCATTCGCATTGCTGCGCCCCTGCGAAGTGCT
CGAGCACCTGTTGCTCATCGGCGAGCATAACGATGAAGTGGCGACATATG
TGGCGCCACTATTTCGCAACGATCCCGAAATGGCCAAGGGTTTTGTGGAG
CTCATGAATGTGGTGACACTGCTTGATAAACTAATTTCGGAGGACATTAA
AATCGAGCTAGATAAACAGCTTTACCAGCGGGAGTCACCGGTTGAAGTAA
TATCTAAGCTGGTGGCTAGAATCAGTATGATCGATGATAATGGTCCAATA
TTGCCATCAAACTGTGTGAGGCAAATCCAACAGAAGCTGCAGAATATACC
AAATCTTGAACCCGCTTTGGAAATGCTGCTCGATGTGCTGTGTATGATTG
ATCCAGATGAACCGCCGCATGATTACTCCCTTTCTACGCGCTTCTTGCAG
TCGTCTGGGGCTCTAATGGGTAGCGAATATGGACTTTCTATTTTGTCCGA
AACAGTGAAGCAAATGGCAATGATACGGTTTTCTGTTTGCCGAAACCTTT
TGGTATTGCAGTACATGGCTTATGGTCAGAACGAAATGGAAAGCGAAAAT
GTTTTAACAAATTTAAATTATTTGAACTCATATTATACACTGGTTTGGAT
TGCCGAGACACCCATTTCATCGAGTACCCCAGCTGGATTCGAGGCATCTA
TTCAACGATTGAGCCGCGCCCAACTTTTCAGCGGCTATAATCGACCATAC
TCCAGCCATCTGAAACATAATGGGAACGATCAGACCACTCTGCTCCGACT
GTTCCTGGAATCGAAAGGTCTGTTCAGCGCCTTGACTATGCTGCTGAAGC
ATGACAGTTTGTCGCTGGACTCGGAGCAATTGAATCTACGCCAGTCTTTG
CTCCAACTTGTTGGATACATCAATAAGATGCTTTGGCCGGGATCTCCGAT
TTACGTATTTCCGGAATGGTTATTTGGGACCTGTCATCACATCATTGTTC
AGGATTACGTGCGCATTTTGTCAAACTGGTGTTCCGTACAAAAACATGCC
AGACGCTTTATGCTAGCCGTATCTCTATTGGATTGCGGTGAGGCCCACAA
GGCCGTGCATCTCTTTCACGAGGCGGAGTCTGGCATTGTGGAGGATGACT
TCCTCTTTGAGCATGTACTGAAAAATACCCCTCTATACGGCAAATTACAG
AATAGCGTCAGCCGTGGCGATACAATTTCCCCCGAAGACACAAAACTGGC
AATTGTTCACTACTATCTTAAGGTTATCCAGCTCTTTGAACAGCATTCCG
CATTGGACTACATTATTCAACTGGCTGACATGGCCATTAGGGTGCTGCAG
CCAGATGATCCTCAGTTGCCCATGTTCCAGTCAATAGTGTTCAATAATCA
TCTGCAGTTGGGACACTACGTGGAGGCGTACACCGCCTTAGTCAACAATG
CAGATATTTCAAGGCGTAAGGATTGCCTTCGCCAGTTGGTCATAACGCTG
TTCCAGAATAAATGTCTGCCACTGCTTATGCAGTTCTCCTACATCGGGTT
GCAAGACGAGTTCGAGAGCATTGTTGAATCCCGGGCACGATCAATGAGCA
TCGATCAGAACGAAGTCTACAACTTTTTGTATGCATTCCATACGAACAAG
GGTAACATGAGAAAAGCTTCTACGGTTATGTATGAGCAGGCCATGCGGTT
TCAAGTAGACAGCGATGCACCAAACGCGCTAGAGAAACGTTGCTCCTCGC
TGTTAATTTGCCTAAACTGTTTGCACCTAGTTGACAGCCGCTACAGATGG
ATTGCCAAGCCTGTTCTTGGTGATGAGCAGGTGATTACCATAGATCAGGA
TAACGACGATGGTGAGCCCAAATGTGACGAGGACAAGAGAGGCCAGGAGG
TGGTTGTTCTAGAGCTGGCTGATATCCGAAGGGAACTGGTGCACGCAGAA
GCTTTACGTGAGCTTTCCTTCTACCGCAAAGATACAGCTGCCTACGAGCG
GGCCACACCCGAGGAGCTATCATACCTGCTGGCTAGTTCCGGCCTGTACA
CCGCGGCATTGAAACTTTCGCGGGGACACTCGTTCTCTGTGCTCCCCATA
TTCGAGAGTCTGACATCCGCTTGTGTTGCTGCCACTGAGGACAAGTCGTC
GGACGCCTGGAACTGGCTGCAAAACAACGACATGGCAGATCTACCTCATC
GAAGTAATGCTGCCGATATGGCCTGGACTTTACTTCAAAAACTGGTTGTG
GATAACGAGGCAAAAGACTCCACCTTGATAAGAAAGAGCGTGGTTCAAAG
GCTTCTCGGGTTAAACGCCTTCTTGCCCCAGTGGCTGATAAACTCCTACA
AGTTATCCCACTCCCGGGAACTGCTCCACTTACTTGTGAAACACAATCGT
CTGCTGGAAGCCGCAGATCTGGGATGTGAAATAATCGCCGGCATGCTGGG
AGCAGGTAGCGAGTATTTCGAATTCAAACACGCGGTGAACATAGCAAACC
CACAGCTCTGCTTCCCCATCAGCACGATCGATTTGCTGCTGCACGGTTTA
AAGATTAATGGCAAGGATGATCTTGATTATGAAATGGCTTACTTTAAACT
CGAAGAAGAAGTTCAAAGATATATTGAGACCATAAAGCGCACCACCGATG
ATAAGATGAGCATGGCCGTTCTGCAGATGCGAACGGATCTTCAGGAAGAA
CGTTAATAGTTCGTTTAAATCAGTTTATTTAATAAGTTTTTTGAATTAAA
TGCTAAAGCGTGTAAATCGTTTAAAAAAAAAAAAAAAAAAAAAA

LD39963.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:12:17
Subject Length Description Subject Range Query Range Score Percent Strand
Nup160-RA 4790 Nup160-RA 39..4415 1..4377 21885 100 Plus
Nup160.a 4732 Nup160.a 300..4394 283..4377 20475 100 Plus
Nup160.a 4732 Nup160.a 31..301 1..271 1355 100 Plus
RfC38-RA 1606 RfC38-RA 1539..1606 4377..4310 340 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:02:07
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 11124238..11124904 1355..2021 3335 100 Plus
chr2L 23010047 chr2L 11125833..11126447 2652..3266 3075 100 Plus
chr2L 23010047 chr2L 11126507..11127034 3261..3788 2625 99.8 Plus
chr2L 23010047 chr2L 11122950..11123442 270..762 2465 100 Plus
chr2L 23010047 chr2L 11123755..11124164 945..1354 2050 100 Plus
chr2L 23010047 chr2L 11127088..11127489 3786..4187 2010 100 Plus
chr2L 23010047 chr2L 11125361..11125603 2290..2532 1215 100 Plus
chr2L 23010047 chr2L 11127561..11127747 4186..4372 935 100 Plus
chr2L 23010047 chr2L 11123500..11123681 763..944 910 100 Plus
chr2L 23010047 chr2L 11122564..11122731 1..168 840 100 Plus
chr2L 23010047 chr2L 11125143..11125305 2127..2289 815 100 Plus
chr2L 23010047 chr2L 11125659..11125778 2533..2652 600 100 Plus
chr2L 23010047 chr2L 11124969..11125077 2021..2129 545 100 Plus
chr2L 23010047 chr2L 11122794..11122898 167..271 525 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:34:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:02:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11125483..11126149 1355..2021 3335 100 Plus
2L 23513712 2L 11127078..11127692 2652..3266 3075 100 Plus
2L 23513712 2L 11127752..11128279 3261..3788 2625 99.8 Plus
2L 23513712 2L 11124195..11124687 270..762 2465 100 Plus
2L 23513712 2L 11125000..11125409 945..1354 2050 100 Plus
2L 23513712 2L 11128333..11128734 3786..4187 2010 100 Plus
2L 23513712 2L 11126606..11126848 2290..2532 1215 100 Plus
2L 23513712 2L 11128806..11128997 4186..4377 960 100 Plus
2L 23513712 2L 11124745..11124926 763..944 910 100 Plus
2L 23513712 2L 11123809..11123976 1..168 840 100 Plus
2L 23513712 2L 11126388..11126550 2127..2289 815 100 Plus
2L 23513712 2L 11126904..11127023 2533..2652 600 100 Plus
2L 23513712 2L 11126214..11126322 2021..2129 545 100 Plus
2L 23513712 2L 11124039..11124143 167..271 525 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:06:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11125483..11126149 1355..2021 3335 100 Plus
2L 23513712 2L 11127078..11127692 2652..3266 3075 100 Plus
2L 23513712 2L 11127752..11128279 3261..3788 2625 99.8 Plus
2L 23513712 2L 11124195..11124687 270..762 2465 100 Plus
2L 23513712 2L 11125000..11125409 945..1354 2050 100 Plus
2L 23513712 2L 11128333..11128734 3786..4187 2010 100 Plus
2L 23513712 2L 11126606..11126848 2290..2532 1215 100 Plus
2L 23513712 2L 11128806..11128997 4186..4377 960 100 Plus
2L 23513712 2L 11124745..11124926 763..944 910 100 Plus
2L 23513712 2L 11123809..11123976 1..168 840 100 Plus
2L 23513712 2L 11126388..11126550 2127..2289 815 100 Plus
2L 23513712 2L 11126904..11127023 2533..2652 600 100 Plus
2L 23513712 2L 11126214..11126322 2021..2129 545 100 Plus
2L 23513712 2L 11124039..11124143 167..271 525 100 Plus
Blast to na_te.dros performed on 2019-03-16 04:02:05 has no hits.

LD39963.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:03:12 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 11127562..11127747 4187..4372 100   Plus
chr2L 11125361..11125603 2290..2532 100 -> Plus
chr2L 11125659..11125777 2533..2651 100 -> Plus
chr2L 11122564..11122730 1..167 100 -> Plus
chr2L 11122795..11122897 168..270 100 -> Plus
chr2L 11122951..11123442 271..762 100 -> Plus
chr2L 11123500..11123681 763..944 100 -> Plus
chr2L 11123755..11124164 945..1354 100 -> Plus
chr2L 11127091..11127488 3789..4186 100 -> Plus
chr2L 11124238..11124904 1355..2021 100 -> Plus
chr2L 11124970..11125075 2022..2127 100 -> Plus
chr2L 11125144..11125305 2128..2289 100 -> Plus
chr2L 11125833..11126447 2652..3266 100 -> Plus
chr2L 11126513..11127034 3267..3788 100 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:22:14 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
CG4738-RA 1..4236 71..4306 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:19:22 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
Nup160-RA 1..4236 71..4306 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:13:24 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
Nup160-RB 1..4236 71..4306 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:34:53 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
CG4738-RA 1..4236 71..4306 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:23:45 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
Nup160-RB 1..4236 71..4306 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:47:43 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
CG4738-RA 31..4402 1..4372 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:19:22 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
Nup160-RA 31..4402 1..4372 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:13:24 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
Nup160-RB 33..4404 1..4372 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:34:54 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
CG4738-RA 31..4402 1..4372 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:23:45 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
Nup160-RB 33..4404 1..4372 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:03:12 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11123809..11123975 1..167 100 -> Plus
2L 11124040..11124142 168..270 100 -> Plus
2L 11124196..11124687 271..762 100 -> Plus
2L 11124745..11124926 763..944 100 -> Plus
2L 11125000..11125409 945..1354 100 -> Plus
2L 11125483..11126149 1355..2021 100 -> Plus
2L 11126215..11126320 2022..2127 100 -> Plus
2L 11126389..11126550 2128..2289 100 -> Plus
2L 11126606..11126848 2290..2532 100 -> Plus
2L 11126904..11127022 2533..2651 100 -> Plus
2L 11127078..11127692 2652..3266 100 -> Plus
2L 11127758..11128279 3267..3788 100 -> Plus
2L 11128336..11128733 3789..4186 100 -> Plus
2L 11128807..11128992 4187..4372 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:03:12 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11123809..11123975 1..167 100 -> Plus
2L 11124040..11124142 168..270 100 -> Plus
2L 11124196..11124687 271..762 100 -> Plus
2L 11124745..11124926 763..944 100 -> Plus
2L 11125000..11125409 945..1354 100 -> Plus
2L 11125483..11126149 1355..2021 100 -> Plus
2L 11126215..11126320 2022..2127 100 -> Plus
2L 11126389..11126550 2128..2289 100 -> Plus
2L 11126606..11126848 2290..2532 100 -> Plus
2L 11126904..11127022 2533..2651 100 -> Plus
2L 11127078..11127692 2652..3266 100 -> Plus
2L 11127758..11128279 3267..3788 100 -> Plus
2L 11128336..11128733 3789..4186 100 -> Plus
2L 11128807..11128992 4187..4372 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:03:12 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11123809..11123975 1..167 100 -> Plus
2L 11124040..11124142 168..270 100 -> Plus
2L 11124196..11124687 271..762 100 -> Plus
2L 11124745..11124926 763..944 100 -> Plus
2L 11125000..11125409 945..1354 100 -> Plus
2L 11125483..11126149 1355..2021 100 -> Plus
2L 11126215..11126320 2022..2127 100 -> Plus
2L 11126389..11126550 2128..2289 100 -> Plus
2L 11126606..11126848 2290..2532 100 -> Plus
2L 11126904..11127022 2533..2651 100 -> Plus
2L 11127078..11127692 2652..3266 100 -> Plus
2L 11127758..11128279 3267..3788 100 -> Plus
2L 11128336..11128733 3789..4186 100 -> Plus
2L 11128807..11128992 4187..4372 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:13:24 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11124745..11124926 763..944 100 -> Plus
arm_2L 11123809..11123975 1..167 100 -> Plus
arm_2L 11124040..11124142 168..270 100 -> Plus
arm_2L 11124196..11124687 271..762 100 -> Plus
arm_2L 11125000..11125409 945..1354 100 -> Plus
arm_2L 11125483..11126149 1355..2021 100 -> Plus
arm_2L 11126215..11126320 2022..2127 100 -> Plus
arm_2L 11126389..11126550 2128..2289 100 -> Plus
arm_2L 11126606..11126848 2290..2532 100 -> Plus
arm_2L 11126904..11127022 2533..2651 100 -> Plus
arm_2L 11127078..11127692 2652..3266 100 -> Plus
arm_2L 11127758..11128279 3267..3788 100 -> Plus
arm_2L 11128336..11128733 3789..4186 100 -> Plus
arm_2L 11128807..11128992 4187..4372 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:48:44 Download gff for LD39963.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11124040..11124142 168..270 100 -> Plus
2L 11123809..11123975 1..167 100 -> Plus
2L 11124745..11124926 763..944 100 -> Plus
2L 11124196..11124687 271..762 100 -> Plus
2L 11125000..11125409 945..1354 100 -> Plus
2L 11125483..11126149 1355..2021 100 -> Plus
2L 11126215..11126320 2022..2127 100 -> Plus
2L 11126389..11126550 2128..2289 100 -> Plus
2L 11126606..11126848 2290..2532 100 -> Plus
2L 11126904..11127022 2533..2651 100 -> Plus
2L 11127078..11127692 2652..3266 100 -> Plus
2L 11127758..11128279 3267..3788 100 -> Plus
2L 11128336..11128733 3789..4186 100 -> Plus
2L 11128807..11128992 4187..4372 100   Plus

LD39963.pep Sequence

Translation from 70 to 4305

> LD39963.pep
MPTSKLQANMSYREVIPRNLSPAEWIEVKINTGTQSTLQDLKTFETSGGY
CYKNTKNVQTRNRFIYWRTYQDVLELSEVSLDISLQRNHLRLRFTDSAVL
NVSLTEQGTSVTLLVVTVSSVHRYVFPLKVAGQEGGAASPEDLLSQSIFY
DVNDKINDPSTYYVTDGFGTMPNAAVSYLTQDSQSAYFAVAYQSKLLLHV
MKCSTGHTITHEIKEPKLMPWFLSNLKGALTGRSETLEAATSMAFSEIGG
EIFILVLYRNNELRLWSVDNLQTVASINCSTELGQDSAAQGPQNSQLRKI
SDQNFCLFLSHNSRAEFICVSIMPDADDASVINLVQNMVPAPQTDLVDFD
ATSSHIWALWSNAEGDFHVSAAYFASNNAIKWVSAALEPPPDRYCLTMEQ
GVDPRETYCSYIFHPGRFDRNVIAKALYMFRRVNLQFDVKQLSMSVLKEQ
VCQAVEDEIQNELKDFVVTDEEYLEISTRLWDRFYSCCEQYHIKLSEPTG
LAVLGGMDAVCLVRRQSFALLRPCEVLEHLLLIGEHNDEVATYVAPLFRN
DPEMAKGFVELMNVVTLLDKLISEDIKIELDKQLYQRESPVEVISKLVAR
ISMIDDNGPILPSNCVRQIQQKLQNIPNLEPALEMLLDVLCMIDPDEPPH
DYSLSTRFLQSSGALMGSEYGLSILSETVKQMAMIRFSVCRNLLVLQYMA
YGQNEMESENVLTNLNYLNSYYTLVWIAETPISSSTPAGFEASIQRLSRA
QLFSGYNRPYSSHLKHNGNDQTTLLRLFLESKGLFSALTMLLKHDSLSLD
SEQLNLRQSLLQLVGYINKMLWPGSPIYVFPEWLFGTCHHIIVQDYVRIL
SNWCSVQKHARRFMLAVSLLDCGEAHKAVHLFHEAESGIVEDDFLFEHVL
KNTPLYGKLQNSVSRGDTISPEDTKLAIVHYYLKVIQLFEQHSALDYIIQ
LADMAIRVLQPDDPQLPMFQSIVFNNHLQLGHYVEAYTALVNNADISRRK
DCLRQLVITLFQNKCLPLLMQFSYIGLQDEFESIVESRARSMSIDQNEVY
NFLYAFHTNKGNMRKASTVMYEQAMRFQVDSDAPNALEKRCSSLLICLNC
LHLVDSRYRWIAKPVLGDEQVITIDQDNDDGEPKCDEDKRGQEVVVLELA
DIRRELVHAEALRELSFYRKDTAAYERATPEELSYLLASSGLYTAALKLS
RGHSFSVLPIFESLTSACVAATEDKSSDAWNWLQNNDMADLPHRSNAADM
AWTLLQKLVVDNEAKDSTLIRKSVVQRLLGLNAFLPQWLINSYKLSHSRE
LLHLLVKHNRLLEAADLGCEIIAGMLGAGSEYFEFKHAVNIANPQLCFPI
STIDLLLHGLKINGKDDLDYEMAYFKLEEEVQRYIETIKRTTDDKMSMAV
LQMRTDLQEER*

LD39963.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:31:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15643-PA 1408 GF15643-PA 1..1405 1..1410 5836 76 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:31:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23708-PA 1412 GG23708-PA 1..1411 1..1410 6957 90.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:31:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10764-PA 1405 GH10764-PA 4..1396 7..1406 4893 66.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:42
Subject Length Description Subject Range Query Range Score Percent Strand
Nup160-PA 1411 CG4738-PA 1..1411 1..1411 7288 100 Plus
Nup160-PB 1411 CG4738-PB 1..1411 1..1411 7288 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:31:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20597-PA 724 GI20597-PA 4..709 7..702 2445 63.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:31:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19544-PA 1411 GL19544-PA 1..1405 6..1408 4967 65.3 Plus
Dper\GL13120-PA 363 GL13120-PA 117..317 384..612 585 49.3 Plus
Dper\GL13120-PA 363 GL13120-PA 1..157 171..333 340 41.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:31:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18394-PA 1411 GA18394-PA 1..1405 6..1408 4960 65.3 Plus
Dpse\GA22486-PA 180 GA22486-PA 34..176 326..470 362 50.3 Plus
Dpse\GA22620-PA 103 GA22620-PA 1..96 125..220 285 56.7 Plus
Dpse\GA22621-PA 98 GA22621-PA 1..96 125..220 283 56.7 Plus
Dpse\GA22486-PA 180 GA22486-PA 1..107 171..312 241 37.3 Plus
Dpse\GA22487-PA 125 GA22487-PA 1..90 507..614 216 42.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:31:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18918-PA 1407 GM18918-PA 1..1406 1..1410 7254 95.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:31:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Nup160-PA 1450 GD23764-PA 1..1449 1..1410 7166 92 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:31:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13938-PA 1411 GJ13938-PA 4..1408 7..1411 5113 68.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:31:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14894-PA 1405 GK14894-PA 1..1391 6..1401 5043 67.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:31:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18515-PA 1412 GE18515-PA 1..1401 1..1400 7001 91.9 Plus

LD39963.hyp Sequence

Translation from 70 to 4305

> LD39963.hyp
MPTSKLQANMSYREVIPRNLSPAEWIEVKINTGTQSTLQDLKTFETSGGY
CYKNTKNVQTRNRFIYWRTYQDVLELSEVSLDISLQRNHLRLRFTDSAVL
NVSLTEQGTSVTLLVVTVSSVHRYVFPLKVAGQEGGAASPEDLLSQSIFY
DVNDKINDPSTYYVTDGFGTMPNAAVSYLTQDSQSAYFAVAYQSKLLLHV
MKCSTGHTITHEIKEPKLMPWFLSNLKGALTGRSETLEAATSMAFSEIGG
EIFILVLYRNNELRLWSVDNLQTVASINCSTELGQDSAAQGPQNSQLRKI
SDQNFCLFLSHNSRAEFICVSIMPDADDASVINLVQNMVPAPQTDLVDFD
ATSSHIWALWSNAEGDFHVSAAYFASNNAIKWVSAALEPPPDRYCLTMEQ
GVDPRETYCSYIFHPGRFDRNVIAKALYMFRRVNLQFDVKQLSMSVLKEQ
VCQAVEDEIQNELKDFVVTDEEYLEISTRLWDRFYSCCEQYHIKLSEPTG
LAVLGGMDAVCLVRRQSFALLRPCEVLEHLLLIGEHNDEVATYVAPLFRN
DPEMAKGFVELMNVVTLLDKLISEDIKIELDKQLYQRESPVEVISKLVAR
ISMIDDNGPILPSNCVRQIQQKLQNIPNLEPALEMLLDVLCMIDPDEPPH
DYSLSTRFLQSSGALMGSEYGLSILSETVKQMAMIRFSVCRNLLVLQYMA
YGQNEMESENVLTNLNYLNSYYTLVWIAETPISSSTPAGFEASIQRLSRA
QLFSGYNRPYSSHLKHNGNDQTTLLRLFLESKGLFSALTMLLKHDSLSLD
SEQLNLRQSLLQLVGYINKMLWPGSPIYVFPEWLFGTCHHIIVQDYVRIL
SNWCSVQKHARRFMLAVSLLDCGEAHKAVHLFHEAESGIVEDDFLFEHVL
KNTPLYGKLQNSVSRGDTISPEDTKLAIVHYYLKVIQLFEQHSALDYIIQ
LADMAIRVLQPDDPQLPMFQSIVFNNHLQLGHYVEAYTALVNNADISRRK
DCLRQLVITLFQNKCLPLLMQFSYIGLQDEFESIVESRARSMSIDQNEVY
NFLYAFHTNKGNMRKASTVMYEQAMRFQVDSDAPNALEKRCSSLLICLNC
LHLVDSRYRWIAKPVLGDEQVITIDQDNDDGEPKCDEDKRGQEVVVLELA
DIRRELVHAEALRELSFYRKDTAAYERATPEELSYLLASSGLYTAALKLS
RGHSFSVLPIFESLTSACVAATEDKSSDAWNWLQNNDMADLPHRSNAADM
AWTLLQKLVVDNEAKDSTLIRKSVVQRLLGLNAFLPQWLINSYKLSHSRE
LLHLLVKHNRLLEAADLGCEIIAGMLGAGSEYFEFKHAVNIANPQLCFPI
STIDLLLHGLKINGKDDLDYEMAYFKLEEEVQRYIETIKRTTDDKMSMAV
LQMRTDLQEER*

LD39963.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:22:54
Subject Length Description Subject Range Query Range Score Percent Strand
Nup160-PA 1411 CG4738-PA 1..1411 1..1411 7288 100 Plus
Nup160-PB 1411 CG4738-PB 1..1411 1..1411 7288 100 Plus