BDGP Sequence Production Resources |
Search the DGRC for LD40103
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 401 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4586-RA |
Protein status: | LD40103.pep: gold |
Preliminary Size: | 2164 |
Sequenced Size: | 2235 |
Gene | Date | Evidence |
---|---|---|
CG4586 | 2001-01-01 | Release 2 assignment |
CG4586 | 2002-05-20 | Blastp of sequenced clone |
CG4586 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4586 | 2008-04-29 | Release 5.5 accounting |
CG4586 | 2008-08-15 | Release 5.9 accounting |
CG4586 | 2008-12-18 | 5.12 accounting |
2235 bp (2235 high quality bases) assembled on 2002-05-20
GenBank Submission: AY118566
> LD40103.complete AGCAGAGAAGTTGGGAAATCCCGTAGAAAAGTAAAACTCTAGGAAAAGAG AGATCGGGAAGGAGAGATAGAGCGATCATGTCTGTGAATGCGGATCTGCA GAGAGAGCGGGCGGCGGCCACCTTGGACAGCGAGGACTTTGCCCGCTGGT GGGCGGGTGGCTCTGGGCAGCTGGAGGAGCGCCGCGCCCTGGAAAGGCGT TTCTATGAGGATCCCGACTTCGCGGAGCCAGTGCATCCGAGCTGTCTGTC ATACAAGGAGCGCTACGAACAGACCGTGGCCCGATCCACACGCTTCCTGG CCAAACTGCGCCAATGGCAGCGGGAGAAGCAGCCACAACTTCAGCTTAGT GTGAATATGCTGAGGGACTTTCGGCTGCTACTCTCCGGATCCCTGGGCAC GGGCCTCTTCCAGCAGAGCTTCCCCCTTCGGGTGCATTTCTCCATGTTCA TGACCACCTTGCTGAGCCAGGGAACCGAGGAGCAGCAGGCCCAGTGGCTC AATCGATCCTGGCACATGGACGGCGTCCTGGGCACCTATGCGCAAACGGA GCTGGGTCACGGCACCTTTGTCCGGGGCCTGGAAACCCGAGCCGACTACG ATCCCATCACGCAGGAATTCATCCTGAACACCCCAACGCAAAGTTCATAC AAGTGGTGGCCCGGCGGACTTGGTAATACCGCCAATGTGGCCATTGTGCT GGCCCAGCTATATGTGAAGGGCAAGCATTATGGCTTGCAATCATTTGTGG TGAGGATCAGGGACGAGAGGACACACGAACCGTTGACTGGAGTCGATGTG GGCGATATAGGACCTCGCCTGGGTGGCAATGGCGTTAACAACGGCTTTCT GGGACTCCGCGACGTGCGGATACCGCGCAATCAAATGCTGATGAAGAACG CCCAAGTCCTGACCGACGGCACCTTCGTCCAGGGTAGACCTCCGCTGCTG CTCTACGGCACAATGGTCTATGTGCGGGTAATTACCGTGAAGGATGTGCT CTTTGGACTGCTCCAGGCTGCCACCATTGCCACCAGGTATTCCGTGGTGC GTCGCCAGAGCCGGATTAACAGCGATCAGCCGGAGGTCTCTGTTTTGGAT CACATCACACAGCAGGCAAAGATTCTACCGCAAATTGCTCGAGGAGTGTC CTATCGCCTGGTATCCGATTGGCTGTGGCGCTTCTACGAGGACGTACTCC GCCAACTGGAGGATGAAAGCACGAAAGGACGCAACTCCCTGCCGGAGCTG CACGCCCTGAGCTGCTGCCTCAAGGCGGTGGCCACCGACGAGGCCAGCGA GGGAGTTGATCTGCTGCGCAAGAGTTGCGGTGGCCACGGATTCCTTTCCT CGGCGAATTTCGATAGCATCTATGGTCTGACCGCCGCCACATACACCTAC GAGGGAGAGTACACAGTACTCCTGCTCCAGACAGCTCGTTTCCTCGTCCG GCAGTATGCGGATAGCTTAAAACGCAAGGTGCTGCCCTCCAGTGTCTCCT ATTTGAGGGATACAGCCCGTTTGATTTGGGGCAAGAATCTGGTTGCGAAT TGTGTGCGAGCGCTGGAGATTTCAGCCATGGAGCAGGTGCGTGATGCTTG GCAGACCCAGAAGATGCACCAATCCGGCAAGGTGAGTCCCGAGATGGCCA GCAATCTGGCTGGAAGGCAGCTCACCTCGGCTGCCATAGCCCATGCTCAC GCATTCTTCACACGCAATGCACTGGAGCAAGTGGAAGCACTTCGAAAGAA GGGCGATCTTAGCCCGAATGTCTCACTCATCTTGGGCCAACTGGTTGAGC TTTTCGTCATCGATACATTCCTGCGACAGTCGGGATGCGTGCTGCGTTGG AACAACGGCATCACTGGCACCCAACTGCGCTTCGTGGAGCGTCGCTTTGA GGAGCTGCTGGCCAAGCTGCGACCCAATGCGGTGGCTCTGGTGGATGGAT TCGATTTTCACGATCGTGTCCTGGGCTCCACGCTGGGGTGTCACGATGGC CGGGTGTACGAGCGTCTCATGGAGGAGGCACGCCGAAATCCGATCAACCA GGAGCCGGTCAACTCGTCCTTCCACAACCACTTGTTGCCCATGATGCGGG GAAAGCTGTGATGTGGGGCTGGTCTTTTGTTTTCTACATACGTATATGTT ATTCACTAATTTTTGTATTGAAGTTGAATCATAACATTTTTTTTTAATAA AGGAAATAGGATTTCGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6863241..6864423 | 1035..2217 | 5750 | 99.1 | Plus |
chrX | 22417052 | chrX | 6862099..6863136 | 1..1038 | 5160 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 13649634..13649771 | 531..668 | 255 | 79 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6862099..6863134 | 1..1036 | 99 | -> | Plus |
chrX | 6863243..6864423 | 1037..2217 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4586-RA | 1..2034 | 78..2111 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4586-RA | 1..2034 | 78..2111 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4586-RA | 1..2034 | 78..2111 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4586-RA | 1..2034 | 78..2111 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4586-RA | 1..2034 | 78..2111 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4586-RA | 1..2217 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4586-RA | 1..2217 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4586-RA | 25..2241 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4586-RA | 1..2217 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4586-RA | 24..2240 | 1..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6969941..6970976 | 1..1036 | 100 | -> | Plus |
X | 6971085..6972265 | 1037..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6969941..6970976 | 1..1036 | 100 | -> | Plus |
X | 6971085..6972265 | 1037..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6969941..6970976 | 1..1036 | 100 | -> | Plus |
X | 6971085..6972265 | 1037..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6863974..6865009 | 1..1036 | 100 | -> | Plus |
arm_X | 6865118..6866298 | 1037..2217 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6978039..6979074 | 1..1036 | 100 | -> | Plus |
X | 6979183..6980363 | 1037..2217 | 100 | Plus |
Translation from 77 to 2110
> LD40103.pep MSVNADLQRERAAATLDSEDFARWWAGGSGQLEERRALERRFYEDPDFAE PVHPSCLSYKERYEQTVARSTRFLAKLRQWQREKQPQLQLSVNMLRDFRL LLSGSLGTGLFQQSFPLRVHFSMFMTTLLSQGTEEQQAQWLNRSWHMDGV LGTYAQTELGHGTFVRGLETRADYDPITQEFILNTPTQSSYKWWPGGLGN TANVAIVLAQLYVKGKHYGLQSFVVRIRDERTHEPLTGVDVGDIGPRLGG NGVNNGFLGLRDVRIPRNQMLMKNAQVLTDGTFVQGRPPLLLYGTMVYVR VITVKDVLFGLLQAATIATRYSVVRRQSRINSDQPEVSVLDHITQQAKIL PQIARGVSYRLVSDWLWRFYEDVLRQLEDESTKGRNSLPELHALSCCLKA VATDEASEGVDLLRKSCGGHGFLSSANFDSIYGLTAATYTYEGEYTVLLL QTARFLVRQYADSLKRKVLPSSVSYLRDTARLIWGKNLVANCVRALEISA MEQVRDAWQTQKMHQSGKVSPEMASNLAGRQLTSAAIAHAHAFFTRNALE QVEALRKKGDLSPNVSLILGQLVELFVIDTFLRQSGCVLRWNNGITGTQL RFVERRFEELLAKLRPNAVALVDGFDFHDRVLGSTLGCHDGRVYERLMEE ARRNPINQEPVNSSFHNHLLPMMRGKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21407-PA | 671 | GF21407-PA | 1..671 | 1..677 | 2976 | 81.1 | Plus |
Dana\GF11673-PA | 669 | GF11673-PA | 6..669 | 3..677 | 1657 | 45.7 | Plus |
Dana\GF12816-PA | 677 | GF12816-PA | 11..677 | 2..677 | 1383 | 42.7 | Plus |
Dana\GF12814-PA | 675 | GF12814-PA | 9..675 | 2..677 | 1330 | 41.5 | Plus |
Dana\GF12815-PA | 827 | GF12815-PA | 192..827 | 23..677 | 1263 | 42 | Plus |
Dana\GF12815-PA | 827 | GF12815-PA | 9..197 | 2..197 | 373 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19624-PA | 677 | GG19624-PA | 1..677 | 1..677 | 3344 | 92.9 | Plus |
Dere\GG21822-PA | 669 | GG21822-PA | 6..669 | 3..677 | 1639 | 45 | Plus |
Dere\GG22113-PA | 677 | GG22113-PA | 11..677 | 2..677 | 1406 | 42.1 | Plus |
Dere\GG22112-PA | 682 | GG22112-PA | 16..682 | 2..677 | 1359 | 42.6 | Plus |
Dere\GG23624-PA | 703 | GG23624-PA | 115..680 | 105..655 | 598 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11897-PA | 694 | GH11897-PA | 9..694 | 6..677 | 2298 | 63 | Plus |
Dgri\GH22025-PA | 669 | GH22025-PA | 4..669 | 1..677 | 1645 | 45.5 | Plus |
Dgri\GH21832-PA | 677 | GH21832-PA | 11..677 | 2..677 | 1392 | 43.1 | Plus |
Dgri\GH21827-PA | 676 | GH21827-PA | 10..676 | 2..677 | 1334 | 42.1 | Plus |
Dgri\GH21830-PA | 676 | GH21830-PA | 10..676 | 2..677 | 1312 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4586-PA | 677 | CG4586-PA | 1..677 | 1..677 | 3505 | 100 | Plus |
CG5009-PA | 669 | CG5009-PA | 6..669 | 3..677 | 1588 | 45.1 | Plus |
Acox57D-d-PA | 677 | CG9709-PA | 11..677 | 2..677 | 1379 | 43 | Plus |
Acox57D-p-PB | 677 | CG9707-PB | 11..677 | 2..677 | 1313 | 42.5 | Plus |
Acox57D-p-PA | 677 | CG9707-PA | 11..677 | 2..677 | 1313 | 42.5 | Plus |
CG9527-PD | 703 | CG9527-PD | 115..680 | 105..655 | 589 | 30.9 | Plus |
CG9527-PC | 703 | CG9527-PC | 115..680 | 105..655 | 589 | 30.9 | Plus |
CG9527-PA | 703 | CG9527-PA | 115..680 | 105..655 | 589 | 30.9 | Plus |
CG9527-PB | 724 | CG9527-PB | 136..701 | 105..655 | 589 | 30.9 | Plus |
CG17544-PD | 693 | CG17544-PD | 50..693 | 40..677 | 501 | 27 | Plus |
CG17544-PB | 693 | CG17544-PB | 50..693 | 40..677 | 501 | 27 | Plus |
CG17544-PC | 693 | CG17544-PC | 50..693 | 40..677 | 501 | 27 | Plus |
CG17544-PA | 693 | CG17544-PA | 50..693 | 40..677 | 501 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15906-PA | 685 | GI15906-PA | 10..681 | 6..674 | 2326 | 64.3 | Plus |
Dmoj\GI19114-PA | 669 | GI19114-PA | 4..669 | 1..677 | 1665 | 45.4 | Plus |
Dmoj\GI19075-PA | 677 | GI19075-PA | 11..677 | 2..677 | 1377 | 41.5 | Plus |
Dmoj\GI19074-PA | 676 | GI19074-PA | 10..676 | 2..677 | 1338 | 42.9 | Plus |
Dmoj\GI19073-PA | 676 | GI19073-PA | 10..676 | 2..677 | 1298 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17222-PA | 669 | GL17222-PA | 6..669 | 3..677 | 1637 | 45.3 | Plus |
Dper\GL13310-PA | 414 | GL13310-PA | 3..385 | 2..384 | 1468 | 70 | Plus |
Dper\GL11771-PA | 677 | GL11771-PA | 11..677 | 2..677 | 1368 | 42.3 | Plus |
Dper\GL11770-PA | 669 | GL11770-PA | 9..669 | 2..677 | 1304 | 41.9 | Plus |
Dper\GL26258-PA | 722 | GL26258-PA | 89..699 | 53..655 | 615 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18278-PA | 674 | GA18278-PA | 3..674 | 2..677 | 2812 | 78.1 | Plus |
Dpse\GA18591-PA | 669 | GA18591-PA | 6..669 | 3..677 | 1642 | 45.6 | Plus |
Dpse\GA21981-PA | 677 | GA21981-PA | 11..677 | 2..677 | 1369 | 42.3 | Plus |
Dpse\GA21980-PA | 675 | GA21980-PA | 9..675 | 2..677 | 1321 | 42.4 | Plus |
Dpse\GA21857-PA | 722 | GA21857-PA | 89..699 | 53..655 | 612 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17495-PA | 555 | GM17495-PA | 1..555 | 123..677 | 2900 | 97.1 | Plus |
Dsec\GM21823-PA | 669 | GM21823-PA | 6..669 | 3..677 | 1657 | 45.4 | Plus |
Dsec\GM15835-PA | 677 | GM15835-PA | 11..677 | 2..677 | 1367 | 42.1 | Plus |
Dsec\GM15834-PA | 682 | GM15834-PA | 16..682 | 2..677 | 1354 | 42.4 | Plus |
Dsec\GM17941-PA | 703 | GM17941-PA | 115..680 | 105..655 | 588 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16824-PA | 677 | GD16824-PA | 1..677 | 1..677 | 3545 | 97.5 | Plus |
Dsim\GD11316-PA | 669 | GD11316-PA | 6..669 | 3..677 | 1649 | 45.3 | Plus |
Dsim\GD11595-PA | 649 | GD11595-PA | 11..649 | 2..677 | 1337 | 41.2 | Plus |
Dsim\GD11593-PA | 679 | GD11593-PA | 16..679 | 2..677 | 1298 | 42 | Plus |
Dsim\GD22578-PA | 535 | GD22578-PA | 115..505 | 105..486 | 553 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16816-PA | 697 | GJ16816-PA | 9..697 | 6..677 | 2435 | 64.5 | Plus |
Dvir\GJ22244-PA | 669 | GJ22244-PA | 4..669 | 1..677 | 1640 | 44.6 | Plus |
Dvir\GJ20049-PA | 677 | GJ20049-PA | 11..677 | 2..677 | 1408 | 43 | Plus |
Dvir\GJ20047-PA | 676 | GJ20047-PA | 10..676 | 2..677 | 1336 | 42.1 | Plus |
Dvir\GJ20048-PA | 676 | GJ20048-PA | 10..676 | 2..677 | 1309 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25030-PA | 674 | GK25030-PA | 1..674 | 3..677 | 2528 | 69.9 | Plus |
Dwil\GK22892-PA | 669 | GK22892-PA | 6..669 | 3..677 | 1643 | 45.3 | Plus |
Dwil\GK20900-PA | 676 | GK20900-PA | 11..676 | 2..677 | 1356 | 42 | Plus |
Dwil\GK20899-PA | 674 | GK20899-PA | 8..674 | 2..677 | 1317 | 42.6 | Plus |
Dwil\GK15355-PA | 703 | GK15355-PA | 116..680 | 105..655 | 623 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15692-PA | 677 | GE15692-PA | 1..677 | 1..677 | 3350 | 93.1 | Plus |
Dyak\GE11899-PA | 669 | GE11899-PA | 6..669 | 3..677 | 1643 | 45.1 | Plus |
Dyak\GE12195-PA | 677 | GE12195-PA | 11..677 | 2..677 | 1405 | 42.4 | Plus |
Dyak\GE12194-PA | 682 | GE12194-PA | 16..682 | 2..677 | 1333 | 42.4 | Plus |
Dyak\GE18444-PA | 703 | GE18444-PA | 115..680 | 105..655 | 599 | 32 | Plus |
Translation from 77 to 2110
> LD40103.hyp MSVNADLQRERAAATLDSEDFARWWAGGSGQLEERRALERRFYEDPDFAE PVHPSCLSYKERYEQTVARSTRFLAKLRQWQREKQPQLQLSVNMLRDFRL LLSGSLGTGLFQQSFPLRVHFSMFMTTLLSQGTEEQQAQWLNRSWHMDGV LGTYAQTELGHGTFVRGLETRADYDPITQEFILNTPTQSSYKWWPGGLGN TANVAIVLAQLYVKGKHYGLQSFVVRIRDERTHEPLTGVDVGDIGPRLGG NGVNNGFLGLRDVRIPRNQMLMKNAQVLTDGTFVQGRPPLLLYGTMVYVR VITVKDVLFGLLQAATIATRYSVVRRQSRINSDQPEVSVLDHITQQAKIL PQIARGVSYRLVSDWLWRFYEDVLRQLEDESTKGRNSLPELHALSCCLKA VATDEASEGVDLLRKSCGGHGFLSSANFDSIYGLTAATYTYEGEYTVLLL QTARFLVRQYADSLKRKVLPSSVSYLRDTARLIWGKNLVANCVRALEISA MEQVRDAWQTQKMHQSGKVSPEMASNLAGRQLTSAAIAHAHAFFTRNALE QVEALRKKGDLSPNVSLILGQLVELFVIDTFLRQSGCVLRWNNGITGTQL RFVERRFEELLAKLRPNAVALVDGFDFHDRVLGSTLGCHDGRVYERLMEE ARRNPINQEPVNSSFHNHLLPMMRGKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4586-PA | 677 | CG4586-PA | 1..677 | 1..677 | 3505 | 100 | Plus |
CG5009-PA | 669 | CG5009-PA | 6..669 | 3..677 | 1588 | 45.1 | Plus |
Acox57D-d-PA | 677 | CG9709-PA | 11..677 | 2..677 | 1379 | 43 | Plus |
Acox57D-p-PB | 677 | CG9707-PB | 11..677 | 2..677 | 1313 | 42.5 | Plus |
Acox57D-p-PA | 677 | CG9707-PA | 11..677 | 2..677 | 1313 | 42.5 | Plus |