BDGP Sequence Production Resources |
Search the DGRC for LD40177
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 401 |
Well: | 77 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11208-RA |
Protein status: | LD40177.pep: gold |
Preliminary Size: | 1971 |
Sequenced Size: | 1985 |
Gene | Date | Evidence |
---|---|---|
CG11208 | 2001-01-01 | Release 2 assignment |
CG11208 | 2001-09-19 | Blastp of sequenced clone |
CG11208 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11208 | 2008-04-29 | Release 5.5 accounting |
CG11208 | 2008-08-15 | Release 5.9 accounting |
CG11208 | 2008-12-18 | 5.12 accounting |
1985 bp (1985 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058683
> LD40177.complete CTTCTGTTGGACTCTACATTTTAATTTGTTTAACAAATTCTTGGGCCAGT ACGCAAGAAAACGCGGCGGCGTAAATTACATTTTTAGTACAATTCTCACT GAAAACCGCGCAAAATGGCCGAAGTTGAAGCCGTGCAGATAATTGCAGAA TCTTTGAAGCAACAGGGCGTGGAATATGTCTTTGGTATCATCGGCATCCC GGTCATCGAGCTGTCCATGGCCTTCCAGGCCGCCGGACTGAAGTACATCG GAATGCGCAACGAGCAAGCCGCCTGCTATGCTGCCCAGGCCATTGGCTAC CTGACTGGAAAGCCGGGAGTGTGCCTGGTTGTGTCCGGACCGGGACTGCT CCATGTTACGGGTGGCATGGCCAATGCCCAGGTGAACTGCTGGCCACTAA TCGTTATTGGTGGTGCCACCAACCAGGATCACGAGGGAATCGGAGGCTTT CAGGAGTGCCCGCAGGTCGAATTGTCCCGGCCGTACTGCAAGTACGCTGC CCGTCCGGCCACTGCTGCTCTAATTCCATTGCACGTGGAAAAAGCGGTGC GCTATGCCACCTATGGACGCCCTGGCGTTGCCTACCTGGACTTCCCTGGC AATATCTTGCAGTCCAAGGCCCAGGAGGCCAGCATCTACAAGGCGCTGGC CCATCCGGCTCCCCCACTAGCCTATCCCCCGCACGATGATGTGATCAGGG CCGCCAAGTTGTTGCGACAGGCCAAGCGACCCTTGGTGATCGTGGGCAAG GGTTCCGCCTACGCCCATGCCGAGAACACACTGCGCCACTTCATCGAGAA CACCAACCTGCCCTTCCTCCCCACTCCCATGGGCAAGGGCGTTGTATCCG ATACGGCTCCGCAGTGCGTCTCCTCGGCTCGCACCCTGGCCTTGCAAAAG GCCGATGTGGTGCTGCTCCTGGGCGCTCGCCTCAACTGGATTCTCCATTT CGGAAAGGCTCCACGCTACGACAAGGACGTGAAGTTTATCCAGGTGGACA TCAATCCTGAGGAGCTGCATAACTCGGTTGTGGCTTCGGTGGCCATCCAG GCGGACATCCGTCCATTCGCCGAGCAATTGTTTGAGCAAATGAACGCTGT TAACTTCCGCTTCGGCTACGAGCAGGATTGGTGGAAGCAGTTGGCCGTCA AGTGCAAGCAGAACCGCGACACCGTGCAAAAGATGTCTTTGAACACGGAG ACGCCGCTGAACTACTACGCGGTGTTCCACCATCTCCGTGAGCTGCTGCC CAAGGACACGATCATTGTTAGTGAGGGAGCCAACACCATGGATATTGGTC GCTCCATGCTGCTGAACGAGCAGCCCCGTCATCGCCTGGATGCCGGTACC TTTGGCACCATGGGCGTGGGTCCTGGATTCGCCGTGGCCGCCGCGCTTTT CTGCCGCGACTTTGCGCCCGGAAAGCGAGTCCTGTGCGTGGAGGGAGACA GCGCCTTTGGATTCTCGGGCATGGAAATTGAGACTATGGTGCGCTATAAG CTGCCCGTCACCATTGTGATTGTGAACAACAATGGCATCTATGGCGGCTT CGACAAGGACACTTTTGAGGCCATTCGCAGTGAGGGCGATCTTACCCAAA TCACACCACCATCGGCATTGGGAGTTCAGGTGCGCTACGAGGAGATGATG AAAATGTTCGGCATGAAGGGCTACTTCTGCACAGAGATCGAACAGCTGCA GGCGGCTGTCAAGGCGGCCAATCAGCTCACCGACAGGCCAACCATCATTA ATGTGGCCATCAGCCCGTCATCCGATCGCAAGCCGCAGTCCTTCAACTGG CTCACAGAGTCAAAACTGTAGAATACCATTAAGGTTTAGGTCTTAAGCAC GATGTTCACCATTCCGAAAGTTATATTGCCACGAATTTTTCTGTATATAC ATGCAATTTTTGATACGCCCTCATTATTGTTGGCTACTCATTAATTGTTG GCTCGCTTTTAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 16130222..16131462 | 1601..361 | 5995 | 98.9 | Minus |
chr2R | 21145070 | chr2R | 16129838..16130158 | 1922..1602 | 1590 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 16131532..16131731 | 363..164 | 970 | 99 | Minus |
chr2R | 21145070 | chr2R | 16132247..16132412 | 166..1 | 755 | 97 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 20243173..20244413 | 1601..361 | 6205 | 100 | Minus |
2R | 25286936 | 2R | 20242752..20243109 | 1959..1602 | 1790 | 100 | Minus |
2R | 25286936 | 2R | 20244483..20244682 | 363..164 | 1000 | 100 | Minus |
2R | 25286936 | 2R | 20245198..20245363 | 166..1 | 830 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 20244372..20245612 | 1601..361 | 6205 | 100 | Minus |
2R | 25260384 | 2R | 20243951..20244308 | 1959..1602 | 1790 | 100 | Minus |
2R | 25260384 | 2R | 20245682..20245881 | 363..164 | 1000 | 100 | Minus |
2R | 25260384 | 2R | 20246397..20246562 | 166..1 | 830 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1974..2045 | 245..175 | 114 | 63.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 16129810..16130158 | 1602..1960 | 96 | <- | Minus |
chr2R | 16130222..16131461 | 362..1601 | 98 | <- | Minus |
chr2R | 16131534..16131729 | 166..361 | 98 | <- | Minus |
chr2R | 16132248..16132412 | 1..165 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11208-RA | 1..1707 | 115..1821 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11208-RA | 1..1707 | 115..1821 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11208-RA | 1..1707 | 115..1821 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11208-RA | 1..1707 | 115..1821 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11208-RA | 1..1707 | 115..1821 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11208-RA | 37..1995 | 1..1960 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11208-RA | 37..1995 | 1..1960 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11208-RA | 26..1984 | 1..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11208-RA | 37..1995 | 1..1960 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11208-RA | 26..1984 | 1..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20242751..20243109 | 1602..1960 | 99 | <- | Minus |
2R | 20243173..20244412 | 362..1601 | 100 | <- | Minus |
2R | 20244485..20244680 | 166..361 | 100 | <- | Minus |
2R | 20245199..20245363 | 1..165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20242751..20243109 | 1602..1960 | 99 | <- | Minus |
2R | 20243173..20244412 | 362..1601 | 100 | <- | Minus |
2R | 20244485..20244680 | 166..361 | 100 | <- | Minus |
2R | 20245199..20245363 | 1..165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20242751..20243109 | 1602..1960 | 99 | <- | Minus |
2R | 20243173..20244412 | 362..1601 | 100 | <- | Minus |
2R | 20244485..20244680 | 166..361 | 100 | <- | Minus |
2R | 20245199..20245363 | 1..165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 16130256..16130614 | 1602..1960 | 99 | <- | Minus |
arm_2R | 16130678..16131917 | 362..1601 | 100 | <- | Minus |
arm_2R | 16131990..16132185 | 166..361 | 100 | <- | Minus |
arm_2R | 16132704..16132868 | 1..165 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20243950..20244308 | 1602..1960 | 99 | <- | Minus |
2R | 20244372..20245611 | 362..1601 | 100 | <- | Minus |
2R | 20245684..20245879 | 166..361 | 100 | <- | Minus |
2R | 20246398..20246562 | 1..165 | 100 | Minus |
Translation from 114 to 1820
> LD40177.hyp MAEVEAVQIIAESLKQQGVEYVFGIIGIPVIELSMAFQAAGLKYIGMRNE QAACYAAQAIGYLTGKPGVCLVVSGPGLLHVTGGMANAQVNCWPLIVIGG ATNQDHEGIGGFQECPQVELSRPYCKYAARPATAALIPLHVEKAVRYATY GRPGVAYLDFPGNILQSKAQEASIYKALAHPAPPLAYPPHDDVIRAAKLL RQAKRPLVIVGKGSAYAHAENTLRHFIENTNLPFLPTPMGKGVVSDTAPQ CVSSARTLALQKADVVLLLGARLNWILHFGKAPRYDKDVKFIQVDINPEE LHNSVVASVAIQADIRPFAEQLFEQMNAVNFRFGYEQDWWKQLAVKCKQN RDTVQKMSLNTETPLNYYAVFHHLRELLPKDTIIVSEGANTMDIGRSMLL NEQPRHRLDAGTFGTMGVGPGFAVAAALFCRDFAPGKRVLCVEGDSAFGF SGMEIETMVRYKLPVTIVIVNNNGIYGGFDKDTFEAIRSEGDLTQITPPS ALGVQVRYEEMMKMFGMKGYFCTEIEQLQAAVKAANQLTDRPTIINVAIS PSSDRKPQSFNWLTESKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11208-PA | 568 | CG11208-PA | 1..568 | 1..568 | 2955 | 100 | Plus |
Translation from 114 to 1820
> LD40177.pep MAEVEAVQIIAESLKQQGVEYVFGIIGIPVIELSMAFQAAGLKYIGMRNE QAACYAAQAIGYLTGKPGVCLVVSGPGLLHVTGGMANAQVNCWPLIVIGG ATNQDHEGIGGFQECPQVELSRPYCKYAARPATAALIPLHVEKAVRYATY GRPGVAYLDFPGNILQSKAQEASIYKALAHPAPPLAYPPHDDVIRAAKLL RQAKRPLVIVGKGSAYAHAENTLRHFIENTNLPFLPTPMGKGVVSDTAPQ CVSSARTLALQKADVVLLLGARLNWILHFGKAPRYDKDVKFIQVDINPEE LHNSVVASVAIQADIRPFAEQLFEQMNAVNFRFGYEQDWWKQLAVKCKQN RDTVQKMSLNTETPLNYYAVFHHLRELLPKDTIIVSEGANTMDIGRSMLL NEQPRHRLDAGTFGTMGVGPGFAVAAALFCRDFAPGKRVLCVEGDSAFGF SGMEIETMVRYKLPVTIVIVNNNGIYGGFDKDTFEAIRSEGDLTQITPPS ALGVQVRYEEMMKMFGMKGYFCTEIEQLQAAVKAANQLTDRPTIINVAIS PSSDRKPQSFNWLTESKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13157-PA | 568 | GF13157-PA | 1..568 | 1..568 | 2999 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20879-PA | 568 | GG20879-PA | 1..568 | 1..568 | 3019 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22747-PA | 568 | GH22747-PA | 1..568 | 1..568 | 2888 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11208-PA | 568 | CG11208-PA | 1..568 | 1..568 | 2955 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18529-PA | 568 | GI18529-PA | 1..568 | 1..568 | 2909 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10162-PA | 568 | GL10162-PA | 1..568 | 1..568 | 2961 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10842-PA | 568 | GA10842-PA | 1..568 | 1..568 | 2959 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19803-PA | 568 | GM19803-PA | 1..568 | 1..568 | 3046 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25296-PA | 540 | GD25296-PA | 1..540 | 1..568 | 2824 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21395-PA | 568 | GJ21395-PA | 1..568 | 1..568 | 2930 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15680-PA | 574 | GK15680-PA | 1..568 | 1..568 | 2946 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13819-PA | 568 | GE13819-PA | 1..568 | 1..568 | 3039 | 99.5 | Plus |