Clone LD40262 Report

Search the DGRC for LD40262

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:402
Well:62
Vector:pOT2
Associated Gene/TranscriptCG30020-RA
Protein status:LD40262.pep: gold
Preliminary Size:4270
Sequenced Size:4741

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30020 2002-06-19 Blastp of sequenced clone
CG30020 2003-01-01 Sim4 clustering to Release 3
CG30020 2008-04-29 Release 5.5 accounting
CG30020 2008-08-15 Release 5.9 accounting
CG30020 2008-12-18 5.12 accounting

Clone Sequence Records

LD40262.complete Sequence

4741 bp (4741 high quality bases) assembled on 2005-08-22

GenBank Submission: BT003576

> LD40262.complete
CCTTTGTAATTTATTTCGACGCGACGCGAGTGGAGAAAAACAATCAAATT
AAATTCTCTAAGACGTGATAAATTCTGGCGCTTTACCAGCTAAACGCTTC
GAACGGACCGCAGCCGATACGGGTGCCACCCGATGAGCAGCTCGTGAACG
ATGGCGCTGAACAAAAGGAAGAGCCCTTACTCGGACCCAATTTCGGGCGC
CGAAGTGGACTACAAGTTGTCATGTCGCTGCTGCTTGAAGACGAACGTGG
AGTACGTCAAACTGGACTCGGTGTCGGTGGCGCGCAGTCTGGACCCGGCG
GACGCCACTGAGAAGATACCGCTCCTTCGTTGCCTGCTGTTCTGCGTGAG
CGCCGATAATGCGCCGGAGCTGCCGCAACACATATGCCTCGAGTGCAGCA
AGAGCCTGCAGGTGGCCTACTACTTCCTTCAGAATGCGCTGCGTGCCCAC
GAGATCCTGTGCCGGAAACTATGTCCCAAGGTTTCAAAGAGACTGAATGG
CACTTTGGCTCAGGAGCAGGAAAAGCCAGCGTGTGCAGAGCCGGTACAGC
CCCTAAAGACCATGCGGCACGAGTGTCAGGTCTGCGGAGTAGTGCTCTAC
AATCGCCTGGAGCTCAAGCAGCACATACGCCAGCATGCAGAGGGTCTTTC
ATACAACTGCAAGTTGTGCAGCTTCACGTCGTTGAAGCAACGAACTTTGT
TCGAGCACTATGTGACCATGCACAACATGCCCCTTAGCCAGGCAGAGGAG
TACGTAAAATCAAAGCATCTTCCAGCTCCTAAAGAAGAAGAGGTTAAGGC
AGTGTGCACGCTTGAGGATATGGAGTTGCTGATACCCACCGTACTTAGGC
CGGAAGATTACGTACAGCCGCATCCGCATATTGATAACGACCAACTGCGA
GACATTGATCACCAGCTGGCCGTCAGCATGGATGAACCCGTACCGTCAGT
GGACAGCCTCACCTCCACCCTGCCGCCGATGGATACGCCCAATGTTAGCA
TCGGCACCGAGTACCTTGTCCTTCCCGACGGTTCGCTGCAGCAGGTTAAC
GGAAGCGGCGTGGTCATCGAGTATATAGACGATAGCAAACCGAATAGTTC
CAGCAACGTCAATGTAAGCCTACAAAATCTCCTGTCCAGCCATAATGATC
CGATGGATATCGATGTCAACGAATTGATCGTGGAGGAAATGATGCCACAG
ATAAGAATCAAGCCAAAACCGGCCGTTATCGGAACATCCATTCACAAGCA
CAAGTGCAAATTCTGTCCGAAAACATTCTCCACTGTAGCGCGTCTAAAAT
CTCATCAGTTGACTCACAGCAATCTTCCCAAATTCTTCTGCGACCAATGC
GACTTTTACTCGTTGCGCAGCGCCGATCTAATACAGCATTACAAGATGGT
CCACCATCGGGTTGATGAAAATGGCAAGACCGGCAAGGAACAGGCGCAAG
GTATAGAGTCTCGTGTCTACTCGTGCGATATGTGCCTGTTCGAGACGTCC
ACCGTTAGCCAGTTGCGAACACACTACAAGGAACGGCACACGGTCCAGCC
CACGGAGGTGCAGCTGCGTCCCAGTTGGACGGGCGAGCCAACGACAACGA
GAGGCGTTGCCGCCAAGCAGCAGACTCCGGCCAAGATATTAAATCACACC
GACATCCCGTTGGGCATTAAATATCCGCCTGGTGTTTTGGAAACGCAAGC
GCCATTGCCGCAACCGGTGGTACATCAACCAATGCCTGATCCAATGCAGC
AAACGGAGCCGATGGCCACCACATCGACGACCATCACCGAATCGGGCGAC
ATCAACGTAGTGGTGGATGCGACGCCGCTCTTCTATGCGGCAACCTCCAA
CTCCCTGTTAGTGACGAACCCGGCACCGGTGACAACGGTGGAGGAAACCA
CCGGTACGGCCAGCAACCATGCATTTGGAATCTTTCCCGAAATCTCAGAG
GGCAACCTGCCCGTGAACGAAGCCGTACAGCAGGCACCAGCCAATTCATC
TAGCGTTTCGGTGTTTGGCGACATGCAGGACTTTATTGACAACACCGATG
TGGCTGCCATATGCACAATTCCCGCGGATGGCATGCCCGTTGTGGATGGT
GATGACATTGTGATTGATAATAACAATATCAGTCTGGACTTTGATGCCGA
GAATTTGTTCGAGGACTTCGAGGAGGAGGAGGATGATACTGTGGCCGACG
AAGAAGACGAGGCCGACAATGAAGACGAGAATGACAACAATGATGCTGCC
ACTGATCAAAATCTGTTGCTGACCAGCGACGATGATGATGTGGACGACTT
TGATGACGAGCAATCGAAGCATCTGCAGAAGCCCTACTGCATTTACTGCA
ATAAGAAGTTTACCAGTCAGTATAAATTCGAGAACCACATGTTTGTTCAT
CGGGGTCTGGCTCCCTATCGCTGCGAACTGTGCACTAACCTCTACAACAT
GAAGCGATTGCTGATCAAGCACTATAAAACTGTGCACAAGCGAATGCCCA
CGAGGGACATGGTCCAGGCGAAGGGCGATAAGGTTTCCGTAGCCCGCACC
AACATCGAAAAACTGTATCCTGGCAGGATAAAGAATCCAATGCTCATGTG
CGCAAAGTGTCCGTTTGAATGCGAATCGGATTCGGAGATGCGCAAGCATC
TGAATGCCCACCATGGAATCAATGACGGAGTGTCCGAGCATGCAAACGAA
GTGTTTATCATACGCAAATTACCATTTGAATGTCCGCGCTGCATTCGATC
GTTTGCGGCCAAGACCACTCTTAGTCGCCACCTGCAGCGCAGTCATTTGG
TGGATACAATTATAGAGATGCAAACGCCGCATTGCGGGGAAGCCATCACG
ACTACGATGGCCACATCCTCATCAACGATTTCTGAGCCCGTAAACTCGGT
CACAGTGGATGGCCAACACAATGAGATGATGCAGACGGATGTTGGGGCTG
AAAAGATGACGGAAGCTTTAGGCAATGGCGATGGCAATGAAGAAGGCGGC
ACAGATGATGGAACAGGAGTTAAAGCAGAACCGGCGGTGCCAGAGGAAGA
ACTAGATCCGGTAACATTGGACGCAGCCACAGCGGTGACTACAACAGCAA
TAGCAGCAGCAATATCAGCGGCAGCAGCAGCGACAGCTACTTCGTTAGAA
TCACCCGTAGCAACCACAGCTTCATCGTCCACCACTCTCTTTCCCACGCC
CACACCATTTGATTTTGATTATGACATAATGAGAGACGAAGCCCAGCAAT
CGTCGCCCAATATCCATGACGTATCCAAAGCCCTCAGCGACAATGCATCA
TCCAGCTGCCCAATTAATGAAAGCTATAAACTGCTGTCCACCACTGCCCT
GGAAACATCGCCAGCGAAGGGTTTACGCTCCAACAGCCGTCTGCATCGTT
CTTCCATTCACATTTGCAAACTCTGTAACCAAACATTTGACGAGCTGGGC
AAGTTGGTCAAGCATGAAATGGAGCTGCACTCCAATACGGAACGTTCGCG
ATGGGGCTATCAGCACAAGTGTGCCATCTGCAATACATCCTACCGCACGC
TTACGTTGCTCAAGTTCCACATGAAGCGACACAGTAATAGAAAATCACAG
TGCAAGCTGTGCCCCAAGTCCTTTGTAACTATCGCAGAGCTCGAGCGGCA
CACGAAGGCCAAGCACAGCAAGGATAAGACGCTTCGGTGCTTTATGGATG
GCTGCCGGAAGACTTTTGCCTTCAAACACCATTTGATACGCCATCAGAAG
GCCTCTCATCTGAGCACGCGGTATATATGTCCCGTTTGCAATAAGGAGGA
AAAGTCCAATGTGCATCTGAAAAATCATATGAGCGTGCACAAAGGTGAGA
TAACCTACAAGTGTCCCAAGTGCGATCGCTCCTATTTGCGACGTGGCAGA
CTCGTAACCCATGCACTCATAATCCATGACTTGCGCTTCACCACCGAAGA
GTTGGGAAACCTCTCATCCCTGGCTACGAACCAAGCCAGACCTAACGATC
TTAAAGTCGCGACGCCCGTGGGACTCCTGGATGGCCGTAAGGATGTGAGC
GGTGCAAGCGAAGAAAATGGGCAGCCCTAAGGAGCTGACGATAATTCCAA
GTAGTTGTGAACTTATGCTTTTACGAATCAAGCAAAGTAATCGCACAATG
TACAAAGTTTGATATAGTCTAAGTACTGTTCCTCTCCATCATTTTAGCAC
ATCAAATGTCTTGAAGTTTTCTTGTTAAGTTCTAGACTAGGACATTAAAC
ACAATCTCTTATACAAAATTAGTTGAAATACAGACGACCGATCACTTATT
GACAAATAGACTTCGGTGAAATTTTCAATGTATTATGAGGATCCAAAAGT
AGCAATGCCCAAATGGCAACTTAAGGTATCGCCTTAAACATAACAATCCG
CAACGGGTCTCAAGGTGTCAGTAGTTAATCCATTCGATTCCCAAGCATGA
TTGAGGCAATCTCCACCAGCTGGCTCTGTATTGGCCAAAGAGAAACGCTT
CACATCTAATGTTTAAAATTCTCCATTATATATATGTATAATTATTTTTT
TTTTTGCAAACGGTCATGTATTTCGTATATTTACGAGCATCGTCATGAAT
AGAATAACCCAATAGTTTTAGGTTTAAATTCAACGCGTAGAAGGGATAAG
TTATCTTCAACGATGTTACTTATAAAAGAAACGTACATTAAATAACTTTT
ACTACTAGATTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAA

LD40262.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:31:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG30020-RA 4800 CG30020-RA 79..4792 1..4714 23570 100 Plus
CG30020.a 4782 CG30020.a 64..4774 1..4714 23500 99.9 Plus
cag-RA 1290 cag-RA 1121..1290 4714..4545 850 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 6778998..6779908 2989..3899 4495 99.6 Plus
chr2R 21145070 chr2R 6779965..6780784 3896..4713 4020 99.6 Plus
chr2R 21145070 chr2R 6777202..6777935 1673..2406 3655 99.9 Plus
chr2R 21145070 chr2R 6774418..6774957 1..540 2700 100 Plus
chr2R 21145070 chr2R 6775186..6775606 638..1058 2090 99.8 Plus
chr2R 21145070 chr2R 6776062..6776412 1322..1672 1755 100 Plus
chr2R 21145070 chr2R 6778578..6778850 2717..2989 1365 100 Plus
chr2R 21145070 chr2R 6778003..6778183 2404..2584 905 100 Plus
chr2R 21145070 chr2R 6775666..6775816 1057..1207 755 100 Plus
chr2R 21145070 chr2R 6775874..6775987 1208..1321 570 100 Plus
chr2R 21145070 chr2R 6775025..6775126 539..640 510 100 Plus
chr2R 21145070 chr2R 6778244..6778339 2585..2680 480 100 Plus
chr2R 21145070 chr2R 6778452..6778489 2679..2716 190 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:34:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:24:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10891407..10892317 2989..3899 4555 100 Plus
2R 25286936 2R 10892374..10893192 3896..4714 4095 100 Plus
2R 25286936 2R 10889611..10890344 1673..2406 3670 100 Plus
2R 25286936 2R 10886827..10887366 1..540 2700 100 Plus
2R 25286936 2R 10887595..10888015 638..1058 2105 100 Plus
2R 25286936 2R 10888471..10888821 1322..1672 1755 100 Plus
2R 25286936 2R 10890987..10891259 2717..2989 1365 100 Plus
2R 25286936 2R 10890412..10890592 2404..2584 905 100 Plus
2R 25286936 2R 10888075..10888225 1057..1207 755 100 Plus
2R 25286936 2R 10888283..10888396 1208..1321 570 100 Plus
2R 25286936 2R 10887434..10887535 539..640 510 100 Plus
2R 25286936 2R 10890653..10890748 2585..2680 480 100 Plus
2R 25286936 2R 10890861..10890898 2679..2716 190 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:22:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 10892606..10893516 2989..3899 4555 100 Plus
2R 25260384 2R 10893573..10894391 3896..4714 4095 100 Plus
2R 25260384 2R 10890810..10891543 1673..2406 3670 100 Plus
2R 25260384 2R 10888026..10888565 1..540 2700 100 Plus
2R 25260384 2R 10888794..10889214 638..1058 2105 100 Plus
2R 25260384 2R 10889670..10890020 1322..1672 1755 100 Plus
2R 25260384 2R 10892186..10892458 2717..2989 1365 100 Plus
2R 25260384 2R 10891611..10891791 2404..2584 905 100 Plus
2R 25260384 2R 10889274..10889424 1057..1207 755 100 Plus
2R 25260384 2R 10889482..10889595 1208..1321 570 100 Plus
2R 25260384 2R 10888633..10888734 539..640 510 100 Plus
2R 25260384 2R 10891852..10891947 2585..2680 480 100 Plus
2R 25260384 2R 10892060..10892097 2679..2716 190 100 Plus
Blast to na_te.dros performed 2019-03-16 04:24:20
Subject Length Description Subject Range Query Range Score Percent Strand
transib3 2883 transib3 TRANSIB3 2883bp 2025..2164 4443..4583 134 57.7 Plus

LD40262.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:25:02 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 6776062..6776412 1322..1672 100 -> Plus
chr2R 6774418..6774957 1..540 100 -> Plus
chr2R 6775027..6775126 541..640 100 -> Plus
chr2R 6775189..6775605 641..1057 99 -> Plus
chr2R 6775667..6775816 1058..1207 100 -> Plus
chr2R 6775874..6775987 1208..1321 100 -> Plus
chr2R 6777202..6777933 1673..2404 99 -> Plus
chr2R 6778004..6778183 2405..2584 100 -> Plus
chr2R 6778244..6778339 2585..2680 100 -> Plus
chr2R 6778454..6778489 2681..2716 100 -> Plus
chr2R 6778578..6778850 2717..2989 100 -> Plus
chr2R 6778999..6779067 2990..3058 100 == Plus
chr2R 6779145..6779908 3136..3899 99 -> Plus
chr2R 6779969..6780784 3900..4713 95   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:22:33 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
CG30020-RA 1..3930 151..4080 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:54:23 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
CG30020-RA 1..3930 151..4080 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:28:46 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
CG30020-RA 1..3930 151..4080 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:35:07 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
CG30020-RA 1..3930 151..4080 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:38:34 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
CG30020-RA 1..3930 151..4080 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:29:57 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
CG30020-RA 13..4725 1..4713 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:54:23 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
CG30020-RA 13..4725 1..4713 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:28:46 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
CG30020-RA 18..4730 1..4713 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:35:07 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
CG30020-RA 13..4725 1..4713 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:38:34 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
CG30020-RA 18..4730 1..4713 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:25:02 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10890653..10890748 2585..2680 100 -> Plus
2R 10890863..10890898 2681..2716 100 -> Plus
2R 10890987..10891259 2717..2989 100 -> Plus
2R 10886827..10887366 1..540 100 -> Plus
2R 10887436..10887535 541..640 100 -> Plus
2R 10887598..10888014 641..1057 100 -> Plus
2R 10888076..10888225 1058..1207 100 -> Plus
2R 10888283..10888396 1208..1321 100 -> Plus
2R 10888471..10888821 1322..1672 100 -> Plus
2R 10889611..10890342 1673..2404 100 -> Plus
2R 10890413..10890592 2405..2584 100 -> Plus
2R 10891408..10892317 2990..3899 100 -> Plus
2R 10892378..10893191 3900..4713 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:25:02 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10890653..10890748 2585..2680 100 -> Plus
2R 10890863..10890898 2681..2716 100 -> Plus
2R 10890987..10891259 2717..2989 100 -> Plus
2R 10886827..10887366 1..540 100 -> Plus
2R 10887436..10887535 541..640 100 -> Plus
2R 10887598..10888014 641..1057 100 -> Plus
2R 10888076..10888225 1058..1207 100 -> Plus
2R 10888283..10888396 1208..1321 100 -> Plus
2R 10888471..10888821 1322..1672 100 -> Plus
2R 10889611..10890342 1673..2404 100 -> Plus
2R 10890413..10890592 2405..2584 100 -> Plus
2R 10891408..10892317 2990..3899 100 -> Plus
2R 10892378..10893191 3900..4713 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:25:02 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10890653..10890748 2585..2680 100 -> Plus
2R 10890863..10890898 2681..2716 100 -> Plus
2R 10890987..10891259 2717..2989 100 -> Plus
2R 10886827..10887366 1..540 100 -> Plus
2R 10887436..10887535 541..640 100 -> Plus
2R 10887598..10888014 641..1057 100 -> Plus
2R 10888076..10888225 1058..1207 100 -> Plus
2R 10888283..10888396 1208..1321 100 -> Plus
2R 10888471..10888821 1322..1672 100 -> Plus
2R 10889611..10890342 1673..2404 100 -> Plus
2R 10890413..10890592 2405..2584 100 -> Plus
2R 10891408..10892317 2990..3899 100 -> Plus
2R 10892378..10893191 3900..4713 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:28:46 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6775103..6775519 641..1057 100 -> Plus
arm_2R 6775581..6775730 1058..1207 100 -> Plus
arm_2R 6774332..6774871 1..540 100 -> Plus
arm_2R 6774941..6775040 541..640 100 -> Plus
arm_2R 6775788..6775901 1208..1321 100 -> Plus
arm_2R 6775976..6776326 1322..1672 100 -> Plus
arm_2R 6777116..6777847 1673..2404 100 -> Plus
arm_2R 6777918..6778097 2405..2584 100 -> Plus
arm_2R 6778158..6778253 2585..2680 100 -> Plus
arm_2R 6778368..6778403 2681..2716 100 -> Plus
arm_2R 6778492..6778764 2717..2989 100 -> Plus
arm_2R 6778913..6779822 2990..3899 100 -> Plus
arm_2R 6779883..6780696 3900..4713 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:13:41 Download gff for LD40262.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10888026..10888565 1..540 100 -> Plus
2R 10888635..10888734 541..640 100 -> Plus
2R 10888797..10889213 641..1057 100 -> Plus
2R 10889275..10889424 1058..1207 100 -> Plus
2R 10889482..10889595 1208..1321 100 -> Plus
2R 10889670..10890020 1322..1672 100 -> Plus
2R 10890810..10891541 1673..2404 100 -> Plus
2R 10891612..10891791 2405..2584 100 -> Plus
2R 10891852..10891947 2585..2680 100 -> Plus
2R 10892062..10892097 2681..2716 100 -> Plus
2R 10892186..10892458 2717..2989 100 -> Plus
2R 10892607..10893516 2990..3899 100 -> Plus
2R 10893577..10894390 3900..4713 100   Plus

LD40262.pep Sequence

Translation from 150 to 4079

> LD40262.pep
MALNKRKSPYSDPISGAEVDYKLSCRCCLKTNVEYVKLDSVSVARSLDPA
DATEKIPLLRCLLFCVSADNAPELPQHICLECSKSLQVAYYFLQNALRAH
EILCRKLCPKVSKRLNGTLAQEQEKPACAEPVQPLKTMRHECQVCGVVLY
NRLELKQHIRQHAEGLSYNCKLCSFTSLKQRTLFEHYVTMHNMPLSQAEE
YVKSKHLPAPKEEEVKAVCTLEDMELLIPTVLRPEDYVQPHPHIDNDQLR
DIDHQLAVSMDEPVPSVDSLTSTLPPMDTPNVSIGTEYLVLPDGSLQQVN
GSGVVIEYIDDSKPNSSSNVNVSLQNLLSSHNDPMDIDVNELIVEEMMPQ
IRIKPKPAVIGTSIHKHKCKFCPKTFSTVARLKSHQLTHSNLPKFFCDQC
DFYSLRSADLIQHYKMVHHRVDENGKTGKEQAQGIESRVYSCDMCLFETS
TVSQLRTHYKERHTVQPTEVQLRPSWTGEPTTTRGVAAKQQTPAKILNHT
DIPLGIKYPPGVLETQAPLPQPVVHQPMPDPMQQTEPMATTSTTITESGD
INVVVDATPLFYAATSNSLLVTNPAPVTTVEETTGTASNHAFGIFPEISE
GNLPVNEAVQQAPANSSSVSVFGDMQDFIDNTDVAAICTIPADGMPVVDG
DDIVIDNNNISLDFDAENLFEDFEEEEDDTVADEEDEADNEDENDNNDAA
TDQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVH
RGLAPYRCELCTNLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDKVSVART
NIEKLYPGRIKNPMLMCAKCPFECESDSEMRKHLNAHHGINDGVSEHANE
VFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHLVDTIIEMQTPHCGEAIT
TTMATSSSTISEPVNSVTVDGQHNEMMQTDVGAEKMTEALGNGDGNEEGG
TDDGTGVKAEPAVPEEELDPVTLDAATAVTTTAIAAAISAAAAATATSLE
SPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVSKALSDNAS
SSCPINESYKLLSTTALETSPAKGLRSNSRLHRSSIHICKLCNQTFDELG
KLVKHEMELHSNTERSRWGYQHKCAICNTSYRTLTLLKFHMKRHSNRKSQ
CKLCPKSFVTIAELERHTKAKHSKDKTLRCFMDGCRKTFAFKHHLIRHQK
ASHLSTRYICPVCNKEEKSNVHLKNHMSVHKGEITYKCPKCDRSYLRRGR
LVTHALIIHDLRFTTEELGNLSSLATNQARPNDLKVATPVGLLDGRKDVS
GASEENGQP*

LD40262.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11473-PA 1306 GF11473-PA 1..1296 1..1309 3844 60.6 Plus
Dana\GF11474-PA 692 GF11474-PA 456..629 1089..1271 228 29.9 Plus
Dana\GF17156-PA 633 GF17156-PA 194..562 885..1254 222 26.4 Plus
Dana\GF14870-PA 751 GF14870-PA 513..693 1067..1260 220 30.3 Plus
Dana\GF24085-PA 979 GF24085-PA 648..840 1086..1259 207 28.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:18:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20158-PA 1321 GG20158-PA 1..1313 1..1309 5686 85.1 Plus
Dere\GG24401-PA 713 GG24401-PA 470..664 1056..1266 236 31.3 Plus
Dere\GG20159-PA 689 GG20159-PA 452..626 1089..1271 225 29.9 Plus
Dere\GG15916-PA 977 GG15916-PA 655..838 1080..1275 219 31.7 Plus
Dere\GG20836-PA 636 GG20836-PA 383..567 1071..1254 205 32.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22843-PA 1333 GH22843-PA 12..1332 18..1249 2695 49.3 Plus
Dgri\GH19213-PA 1892 GH19213-PA 1721..1891 1089..1266 216 32.2 Plus
Dgri\GH23310-PA 1093 GH23310-PA 769..940 1075..1254 209 31.1 Plus
Dgri\GH10737-PA 819 GH10737-PA 615..777 1089..1260 205 30.6 Plus
Dgri\GH10788-PA 338 GH10788-PA 105..309 1077..1283 204 31.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG30020-PA 1309 CG30020-PA 1..1309 1..1309 6915 100 Plus
CG30020-PC 1270 CG30020-PC 1..1270 1..1309 6643 97 Plus
CG32772-PE 520 CG32772-PE 43..303 975..1266 254 27.9 Plus
CG32772-PC 520 CG32772-PC 43..303 975..1266 254 27.9 Plus
CG12942-PA 686 CG12942-PA 449..623 1089..1271 243 29.3 Plus
CG3407-PA 714 CG3407-PA 383..708 960..1301 240 25.6 Plus
CG7372-PA 971 CG7372-PA 583..844 1029..1283 237 26.6 Plus
CG6654-PA 639 CG6654-PA 195..570 885..1254 232 25.2 Plus
crol-PF 907 CG14938-PF 250..409 1088..1256 232 31.2 Plus
CTCF-PA 818 CG8591-PA 142..456 958..1257 231 26.4 Plus
CG2202-PA 889 CG2202-PA 586..767 1075..1266 231 30.1 Plus
CG5245-PA 501 CG5245-PA 132..296 1082..1256 224 30.7 Plus
CG4730-PB 334 CG4730-PB 125..297 1089..1268 221 31.7 Plus
CG4730-PC 392 CG4730-PC 183..355 1089..1268 221 31.7 Plus
CG4730-PA 392 CG4730-PA 183..355 1089..1268 221 31.7 Plus
Meics-PB 571 CG8474-PB 260..438 1087..1273 221 28.6 Plus
Meics-PA 583 CG8474-PA 272..450 1087..1273 221 28.6 Plus
crol-PG 878 CG14938-PG 90..407 964..1254 220 25.2 Plus
crol-PF 907 CG14938-PF 444..605 1085..1254 219 31.4 Plus
crol-PD 878 CG14938-PD 415..576 1085..1254 219 31.4 Plus
crol-PB 891 CG14938-PB 361..519 1087..1254 219 30.2 Plus
crol-PI 962 CG14938-PI 361..519 1087..1254 219 30.2 Plus
crol-PE 962 CG14938-PE 361..519 1087..1254 219 30.2 Plus
crol-PA 962 CG14938-PA 361..519 1087..1254 219 30.2 Plus
crol-PF 907 CG14938-PF 489..670 1075..1259 218 29.3 Plus
Meics-PB 571 CG8474-PB 303..476 1075..1256 218 29.3 Plus
Meics-PA 583 CG8474-PA 315..488 1075..1256 218 29.3 Plus
crol-PG 878 CG14938-PG 460..641 1075..1259 218 29.3 Plus
crol-PD 878 CG14938-PD 460..641 1075..1259 218 29.3 Plus
crol-PI 962 CG14938-PI 544..725 1075..1259 218 29.3 Plus
crol-PE 962 CG14938-PE 544..725 1075..1259 218 29.3 Plus
crol-PA 962 CG14938-PA 544..725 1075..1259 218 29.3 Plus
crol-PC 756 CG14938-PC 338..519 1075..1259 218 29.3 Plus
CG31224-PC 1784 CG31224-PC 1613..1775 1089..1259 217 30.5 Plus
CG31224-PB 1784 CG31224-PB 1613..1775 1089..1259 217 30.5 Plus
CG31224-PA 1784 CG31224-PA 1613..1775 1089..1259 217 30.5 Plus
CG15436-PA 346 CG15436-PA 169..345 1075..1259 216 31.2 Plus
CG12299-PA 736 CG12299-PA 46..472 857..1257 216 21 Plus
crol-PD 878 CG14938-PD 90..379 964..1254 215 26.4 Plus
crol-PB 891 CG14938-PB 90..379 964..1254 215 26.4 Plus
crol-PI 962 CG14938-PI 90..379 964..1254 215 26.4 Plus
crol-PE 962 CG14938-PE 90..379 964..1254 215 26.4 Plus
crol-PA 962 CG14938-PA 90..379 964..1254 215 26.4 Plus
wdn-PA 869 CG1454-PA 279..468 1067..1262 215 31.3 Plus
crol-PF 907 CG14938-PF 418..601 1087..1277 214 28.4 Plus
crol-PD 878 CG14938-PD 389..572 1087..1277 214 28.4 Plus
pita-PB 623 CG3941-PB 122..412 944..1254 212 25.4 Plus
pita-PA 683 CG3941-PA 182..472 944..1254 212 25.4 Plus
crol-PF 907 CG14938-PF 335..492 1089..1254 211 29.3 Plus
cg-PC 629 CG8367-PC 80..298 1035..1257 211 29.1 Plus
cg-PA 671 CG8367-PA 122..340 1035..1257 211 29.1 Plus
cg-PD 671 CG8367-PD 122..340 1035..1257 211 29.1 Plus
cg-PB 772 CG8367-PB 223..441 1035..1257 211 29.1 Plus
cg-PI 773 CG8367-PI 223..441 1035..1257 211 29.1 Plus
cg-PM 780 CG8367-PM 230..448 1035..1257 211 29.1 Plus
cg-PJ 825 CG8367-PJ 223..441 1035..1257 211 29.1 Plus
cg-PL 837 CG8367-PL 235..453 1035..1257 211 29.1 Plus
CG2202-PA 889 CG2202-PA 91..644 752..1254 210 20.4 Plus
CG4424-PA 345 CG4424-PA 184..317 1119..1254 210 33.6 Plus
crol-PC 756 CG14938-PC 118..450 975..1277 209 24.8 Plus
crol-PH 686 CG14938-PH 118..451 975..1277 209 25.1 Plus
cg-PF 770 CG8367-PF 218..433 1038..1257 209 29 Plus
CG5245-PA 501 CG5245-PA 62..241 1067..1256 208 26.8 Plus
crol-PG 878 CG14938-PG 250..435 1088..1254 208 27.7 Plus
crol-PG 878 CG14938-PG 387..572 1085..1277 208 28.1 Plus
crol-PB 891 CG14938-PB 471..656 1085..1277 208 28.1 Plus
crol-PI 962 CG14938-PI 471..656 1085..1277 208 28.1 Plus
crol-PE 962 CG14938-PE 471..656 1085..1277 208 28.1 Plus
crol-PA 962 CG14938-PA 471..656 1085..1277 208 28.1 Plus
cg-PN 686 CG8367-PN 129..348 1035..1257 208 29.1 Plus
crol-PB 891 CG14938-PB 503..660 1089..1254 207 29.8 Plus
crol-PH 686 CG14938-PH 298..455 1089..1254 207 29.8 Plus
cg-PK 665 CG8367-PK 117..333 1038..1257 206 29 Plus
crol-PB 891 CG14938-PB 250..437 1088..1256 205 27.4 Plus
crol-PI 962 CG14938-PI 250..437 1088..1256 205 27.4 Plus
crol-PE 962 CG14938-PE 250..437 1088..1256 205 27.4 Plus
crol-PA 962 CG14938-PA 250..437 1088..1256 205 27.4 Plus
CG15073-PB 551 CG15073-PB 315..490 1081..1263 205 27.8 Plus
CG15073-PA 580 CG15073-PA 344..519 1081..1263 205 27.8 Plus
CG15436-PA 346 CG15436-PA 128..285 1089..1255 204 28 Plus
CG6654-PA 639 CG6654-PA 427..598 1075..1254 203 27.5 Plus
CG14711-PA 377 CG14711-PA 228..356 1124..1254 203 33.3 Plus
CG15269-PA 587 CG15269-PA 313..485 1075..1254 203 27.1 Plus
Meics-PB 571 CG8474-PB 267..449 1073..1257 200 28.6 Plus
Meics-PA 583 CG8474-PA 279..461 1073..1257 200 28.6 Plus
M1BP-PA 418 CG9797-PA 241..381 1112..1254 198 29.9 Plus
crol-PD 878 CG14938-PD 361..519 1087..1254 197 26.6 Plus
crol-PG 878 CG14938-PG 361..519 1087..1254 196 26.6 Plus
crol-PB 891 CG14938-PB 445..603 1087..1254 196 26.6 Plus
crol-PI 962 CG14938-PI 445..603 1087..1254 196 26.6 Plus
crol-PE 962 CG14938-PE 445..603 1087..1254 196 26.6 Plus
crol-PA 962 CG14938-PA 445..603 1087..1254 196 26.6 Plus
CG15269-PA 587 CG15269-PA 357..516 1089..1255 196 27.6 Plus
CTCF-PA 818 CG8591-PA 197..581 958..1267 195 22.9 Plus
crol-PB 891 CG14938-PB 389..547 1087..1254 194 28.4 Plus
crol-PI 962 CG14938-PI 389..547 1087..1254 194 28.4 Plus
crol-PE 962 CG14938-PE 389..547 1087..1254 194 28.4 Plus
crol-PA 962 CG14938-PA 389..547 1087..1254 194 28.4 Plus
Neu2-PB 308 CG7204-PB 121..259 1124..1264 194 30.3 Plus
crol-PF 907 CG14938-PF 221..379 1122..1254 193 29.2 Plus
crol-PF 907 CG14938-PF 391..548 1089..1254 188 25.7 Plus
crol-PG 878 CG14938-PG 307..463 1089..1254 188 26.9 Plus
CG15269-PA 587 CG15269-PA 171..429 1000..1254 187 23.2 Plus
CG2202-PA 889 CG2202-PA 524..728 1081..1254 186 25 Plus
crol-PD 878 CG14938-PD 307..463 1089..1254 181 27.5 Plus
CG4730-PB 334 CG4730-PB 76..295 676..891 180 24.8 Plus
CG4730-PC 392 CG4730-PC 134..353 676..891 180 24.8 Plus
CG4730-PA 392 CG4730-PA 134..353 676..891 180 24.8 Plus
pita-PB 623 CG3941-PB 34..385 503..878 178 22.4 Plus
pita-PA 683 CG3941-PA 94..445 503..878 178 22.4 Plus
CG5245-PA 501 CG5245-PA 236..406 1075..1254 174 24.9 Plus
CG5245-PA 501 CG5245-PA 195..380 1089..1256 172 26.5 Plus
crol-PB 891 CG14938-PB 527..684 1085..1246 168 26.8 Plus
crol-PH 686 CG14938-PH 322..479 1085..1246 168 26.8 Plus
CG12299-PA 736 CG12299-PA 355..502 1075..1231 167 27.8 Plus
CG5245-PA 501 CG5245-PA 306..462 1089..1254 162 26.9 Plus
pita-PB 623 CG3941-PB 228..383 1124..1280 162 27.7 Plus
pita-PA 683 CG3941-PA 288..443 1124..1280 162 27.7 Plus
CG5245-PA 501 CG5245-PA 320..490 1076..1254 161 26 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:18:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21221-PA 1524 GI21221-PA 174..1498 16..1271 3065 51.4 Plus
Dmoj\GI11685-PA 939 GI11685-PA 582..830 1077..1294 221 28.9 Plus
Dmoj\GI24247-PA 1874 GI24247-PA 1703..1873 1089..1266 215 32.2 Plus
Dmoj\GI20987-PA 797 GI20987-PA 585..768 1089..1285 204 29.3 Plus
Dmoj\GI17300-PA 323 GI17300-PA 95..276 1077..1259 202 33.3 Plus
Dmoj\GI17300-PA 323 GI17300-PA 83..215 1123..1254 173 35.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17390-PA 1359 GL17390-PA 1..1333 1..1296 3423 53.9 Plus
Dper\GL26275-PA 880 GL26275-PA 57..598 689..1254 247 23.4 Plus
Dper\GL17391-PA 704 GL17391-PA 468..641 1089..1271 214 28.3 Plus
Dper\GL23170-PA 1845 GL23170-PA 1674..1844 1089..1266 213 32.2 Plus
Dper\GL24974-PA 880 GL24974-PA 517..704 1086..1254 203 28.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:18:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15581-PA 1413 GA15581-PA 1..1387 1..1296 3396 52.5 Plus
Dpse\GA17430-PA 773 GA17430-PA 530..717 1057..1260 223 31.2 Plus
Dpse\GA11925-PA 704 GA11925-PA 468..641 1089..1271 214 28.3 Plus
Dpse\GA16105-PB 1852 GA16105-PB 1681..1851 1089..1266 213 32.2 Plus
Dpse\GA13064-PA 871 GA13064-PA 292..459 1089..1262 200 32 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:18:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21247-PA 1306 GM21247-PA 1..1306 1..1309 6116 92.3 Plus
Dsec\GM21248-PA 686 GM21248-PA 449..623 1089..1271 231 29.9 Plus
Dsec\GM18118-PA 714 GM18118-PA 471..659 1056..1260 226 30.1 Plus
Dsec\GM25548-PA 983 GM25548-PA 661..842 1080..1269 221 31.1 Plus
Dsec\GM18693-PA 1736 GM18693-PA 1565..1735 1089..1266 207 31.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:19:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22726-PA 714 GD22726-PA 471..659 1056..1260 226 30.1 Plus
Dsim\GD14561-PA 976 GD14561-PA 654..827 1080..1261 218 31.4 Plus
Dsim\GD18017-PA 840 GD18017-PA 268..439 1086..1262 203 33.1 Plus
Dsim\GD20376-PA 639 GD20376-PA 414..570 1089..1254 200 33.5 Plus
Dsim\GD20159-PA 976 GD20159-PA 805..975 1089..1266 200 31.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:19:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20824-PA 1330 GJ20824-PA 12..1307 18..1274 3108 53.5 Plus
Dvir\GJ10821-PA 1836 GJ10821-PA 1665..1835 1089..1266 216 32.2 Plus
Dvir\GJ11357-PA 938 GJ11357-PA 591..807 1084..1281 211 27.1 Plus
Dvir\GJ17256-PA 695 GJ17256-PA 100..612 719..1267 210 22.9 Plus
Dvir\GJ24179-PA 872 GJ24179-PA 290..465 1082..1262 204 32.8 Plus
Dvir\GJ17256-PA 695 GJ17256-PA 190..689 730..1254 173 23 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:19:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15911-PA 1365 GK15911-PA 24..1352 17..1289 2930 49.5 Plus
Dwil\GK14168-PA 1821 GK14168-PA 1650..1820 1089..1266 213 32.2 Plus
Dwil\GK14807-PA 1050 GK14807-PA 686..879 1085..1259 212 29.8 Plus
Dwil\GK10699-PA 558 GK10699-PA 375..539 1089..1261 209 33.1 Plus
Dwil\GK14635-PA 748 GK14635-PA 466..692 1030..1260 207 26.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:19:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12847-PA 1323 GE12847-PA 1..1315 1..1309 5746 86.4 Plus
Dyak\GE14791-PA 725 GE14791-PA 425..667 1003..1266 233 27.9 Plus
Dyak\GE12848-PA 690 GE12848-PA 453..627 1089..1271 221 29.3 Plus
Dyak\GE22262-PA 960 GE22262-PA 638..811 1080..1261 216 31.4 Plus
Dyak\GE25185-PA 1768 GE25185-PA 1597..1767 1089..1266 209 31.7 Plus

LD40262.hyp Sequence

Translation from 150 to 4079

> LD40262.hyp
MALNKRKSPYSDPISGAEVDYKLSCRCCLKTNVEYVKLDSVSVARSLDPA
DATEKIPLLRCLLFCVSADNAPELPQHICLECSKSLQVAYYFLQNALRAH
EILCRKLCPKVSKRLNGTLAQEQEKPACAEPVQPLKTMRHECQVCGVVLY
NRLELKQHIRQHAEGLSYNCKLCSFTSLKQRTLFEHYVTMHNMPLSQAEE
YVKSKHLPAPKEEEVKAVCTLEDMELLIPTVLRPEDYVQPHPHIDNDQLR
DIDHQLAVSMDEPVPSVDSLTSTLPPMDTPNVSIGTEYLVLPDGSLQQVN
GSGVVIEYIDDSKPNSSSNVNVSLQNLLSSHNDPMDIDVNELIVEEMMPQ
IRIKPKPAVIGTSIHKHKCKFCPKTFSTVARLKSHQLTHSNLPKFFCDQC
DFYSLRSADLIQHYKMVHHRVDENGKTGKEQAQGIESRVYSCDMCLFETS
TVSQLRTHYKERHTVQPTEVQLRPSWTGEPTTTRGVAAKQQTPAKILNHT
DIPLGIKYPPGVLETQAPLPQPVVHQPMPDPMQQTEPMATTSTTITESGD
INVVVDATPLFYAATSNSLLVTNPAPVTTVEETTGTASNHAFGIFPEISE
GNLPVNEAVQQAPANSSSVSVFGDMQDFIDNTDVAAICTIPADGMPVVDG
DDIVIDNNNISLDFDAENLFEDFEEEEDDTVADEEDEADNEDENDNNDAA
TDQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVH
RGLAPYRCELCTNLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDKVSVART
NIEKLYPGRIKNPMLMCAKCPFECESDSEMRKHLNAHHGINDGVSEHANE
VFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHLVDTIIEMQTPHCGEAIT
TTMATSSSTISEPVNSVTVDGQHNEMMQTDVGAEKMTEALGNGDGNEEGG
TDDGTGVKAEPAVPEEELDPVTLDAATAVTTTAIAAAISAAAAATATSLE
SPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVSKALSDNAS
SSCPINESYKLLSTTALETSPAKGLRSNSRLHRSSIHICKLCNQTFDELG
KLVKHEMELHSNTERSRWGYQHKCAICNTSYRTLTLLKFHMKRHSNRKSQ
CKLCPKSFVTIAELERHTKAKHSKDKTLRCFMDGCRKTFAFKHHLIRHQK
ASHLSTRYICPVCNKEEKSNVHLKNHMSVHKGEITYKCPKCDRSYLRRGR
LVTHALIIHDLRFTTEELGNLSSLATNQARPNDLKVATPVGLLDGRKDVS
GASEENGQP*

LD40262.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:44:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG30020-PA 1309 CG30020-PA 1..1309 1..1309 6915 100 Plus
CG30020-PC 1270 CG30020-PC 1..1270 1..1309 6643 97 Plus
CG32772-PE 520 CG32772-PE 43..303 975..1266 254 27.9 Plus
CG32772-PC 520 CG32772-PC 43..303 975..1266 254 27.9 Plus
CG12942-PA 686 CG12942-PA 449..623 1089..1271 243 29.3 Plus