BDGP Sequence Production Resources |
Search the DGRC for LD40271
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 402 |
Well: | 71 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4749-RA |
Protein status: | LD40271.pep: gold |
Preliminary Size: | 1752 |
Sequenced Size: | 1623 |
Gene | Date | Evidence |
---|---|---|
CG4749 | 2001-01-01 | Release 2 assignment |
CG4749 | 2001-09-19 | Blastp of sequenced clone |
CG4749 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4749 | 2008-04-29 | Release 5.5 accounting |
CG4749 | 2008-08-15 | Release 5.9 accounting |
CG4749 | 2008-12-18 | 5.12 accounting |
1623 bp (1623 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058685
> LD40271.complete TTTCAACGGATTGCGGAAAATGTTGAAAGCACGGAACGTTTGTTTGCTGT CCAGGAGGTGGAAGAGTGGCGCCAAGAAGCGATGGAATGTCCTGCAGAAC AAGAAGAACAACTGTGACCGAGCGCTGGAGAACTTCGATGACTTCTACGG AAGTGTCTACGGCACCCGGTGGAAGAACATGCGGGCGGCGCTTCTCACGA GGCACAAGTATGTCGCCCTGGTCAACAATTTCGGGGACACGGAGCAGACG TGCGCCATGCTGGAGTCAGATGGAGCCATCAACATGAAGTCGCTTATTAA CCTGGCGCAGGATCGGGTAAAGGACAGCACGGAGACGGTGCCGGAACAAG GCAAATCACGTCATGAAATTGAAAGCAAACTGGATGCACTGCTGCGGAAA CAGCAGGAGCGCGAGGTGGCCTCCATATACCCGAGCTCGCCAGAAGATGG TTCATCGGCGCCACTGCCGCTGGAACTGAAGTTTGACAACGTAGAGGAAG ATCAGCCGGAGCAAGTGAATAATCCCTTCAAGCAGAGCCTGACGAAGGCT TTGGAGGAGGATGTGAAGCTGGACGAGCATCGGTTGGTGGATCCCCAATT TGGCACAGGCGGACTGTATGAATACATGCCTGCCCACAGCATCAAGGGCA TGGAGGACTGGGTGGCAGAGTCGGAGCACTACAAGTACTACCAAACCAGC GCCGACTTCCCGCTCGCCATTGAACCGGAGCCTTCCTTTCACTACCCCGA GCATCTGTCCCTGTACACATATGAAATGGGCAACTGCTCGGACTTCAAGG GACCCAAGAAGTGCATGACCGGTGTGCTCTCCCACTTTATGATGGATGGT GCCTCGACTTTGCCGCCTCTCTTCCTGCAGGTGAAGCCTGGCGAGCGTGT GCTCGATGCCTGTGCCTCTCCCGGCGGCAAATCGCTGCTTATGCTGCAGA CGCTGCACTTGGACCACCTGGTCTGCAATGACATCCAAGAATCCCGCCTA AACAAGCTGCGCAAAGTGATGCAGGAGTACCTGTTCGACTACAAGGAGCG CTGGGCTGGAAAGCGCCTCATCCTCAGCCAGAGTGACGCCCGCAATCTGG ACCAGTACGAGCAGTTCGACAAGATCCTGGTCGACGTGCCCTGCACCACG GATCGCCATGTGCTCAACGAGCAGGACAACAATATTTTCAAGCCGACGCG CATAAAGGAGCGCCTGCGGATACCAGAGCTCCAGGCAGGCATCCTGGCCA ACTGCTTGCGTCTCCTGCGACCAGGCGGCAGTTTGGTCTACTCCACCTGC TCGCTGTCGCCCATCCAGAACGATGGTGTCGTCCACATGGCTCTGCAAAA GGTCTTCACGGAGTACGGCATCACAACTACCATCAAGGATCTGAGTCGCC ACACGGCGCTCTTCAGCGATGTCTTCAAGTTCGAGCACCCAAAGGGACTC AAGTATGGACAAATGGTGGTGCCCTACCTGCCGGCCAACTTTGGACCCAT GTACTTTAGTAAAATAACCAGAAATGTGTGATTAAATGAAAGTTGTTGGC TGATTAACAAGACTATATAACTGTTGCCCCAATAAATAATAAGAGTTGTA AACTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4749-RA | 1622 | CG4749-RA | 14..1622 | 1..1609 | 8045 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 1147763..1149366 | 1..1604 | 7990 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1147846..1149454 | 1..1609 | 8045 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1147846..1149454 | 1..1609 | 8045 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 1147763..1149366 | 1..1604 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4749-RA | 1..1512 | 20..1531 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4749-RA | 1..1512 | 20..1531 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4749-RA | 1..1512 | 20..1531 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4749-RA | 1..1512 | 20..1531 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4749-RA | 1..1512 | 20..1531 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4749-RA | 14..1617 | 1..1604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4749-RA | 14..1617 | 1..1604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4749-RA | 25..1628 | 1..1604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4749-RA | 14..1617 | 1..1604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4749-RA | 25..1628 | 1..1604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1147846..1149449 | 1..1604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1147846..1149449 | 1..1604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1147846..1149449 | 1..1604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 1147846..1149449 | 1..1604 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1147846..1149449 | 1..1604 | 100 | Plus |
Translation from 0 to 1530
> LD40271.hyp FNGLRKMLKARNVCLLSRRWKSGAKKRWNVLQNKKNNCDRALENFDDFYG SVYGTRWKNMRAALLTRHKYVALVNNFGDTEQTCAMLESDGAINMKSLIN LAQDRVKDSTETVPEQGKSRHEIESKLDALLRKQQEREVASIYPSSPEDG SSAPLPLELKFDNVEEDQPEQVNNPFKQSLTKALEEDVKLDEHRLVDPQF GTGGLYEYMPAHSIKGMEDWVAESEHYKYYQTSADFPLAIEPEPSFHYPE HLSLYTYEMGNCSDFKGPKKCMTGVLSHFMMDGASTLPPLFLQVKPGERV LDACASPGGKSLLMLQTLHLDHLVCNDIQESRLNKLRKVMQEYLFDYKER WAGKRLILSQSDARNLDQYEQFDKILVDVPCTTDRHVLNEQDNNIFKPTR IKERLRIPELQAGILANCLRLLRPGGSLVYSTCSLSPIQNDGVVHMALQK VFTEYGITTTIKDLSRHTALFSDVFKFEHPKGLKYGQMVVPYLPANFGPM YFSKITRNV*
Translation from 19 to 1530
> LD40271.pep MLKARNVCLLSRRWKSGAKKRWNVLQNKKNNCDRALENFDDFYGSVYGTR WKNMRAALLTRHKYVALVNNFGDTEQTCAMLESDGAINMKSLINLAQDRV KDSTETVPEQGKSRHEIESKLDALLRKQQEREVASIYPSSPEDGSSAPLP LELKFDNVEEDQPEQVNNPFKQSLTKALEEDVKLDEHRLVDPQFGTGGLY EYMPAHSIKGMEDWVAESEHYKYYQTSADFPLAIEPEPSFHYPEHLSLYT YEMGNCSDFKGPKKCMTGVLSHFMMDGASTLPPLFLQVKPGERVLDACAS PGGKSLLMLQTLHLDHLVCNDIQESRLNKLRKVMQEYLFDYKERWAGKRL ILSQSDARNLDQYEQFDKILVDVPCTTDRHVLNEQDNNIFKPTRIKERLR IPELQAGILANCLRLLRPGGSLVYSTCSLSPIQNDGVVHMALQKVFTEYG ITTTIKDLSRHTALFSDVFKFEHPKGLKYGQMVVPYLPANFGPMYFSKIT RNV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15166-PA | 506 | GF15166-PA | 1..505 | 1..502 | 2364 | 85.9 | Plus |
Dana\GF21493-PA | 737 | GF21493-PA | 162..339 | 276..443 | 202 | 30.8 | Plus |
Dana\GF11004-PA | 441 | GF11004-PA | 223..380 | 286..444 | 159 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24769-PA | 503 | GG24769-PA | 1..503 | 1..503 | 2630 | 95 | Plus |
Dere\EG:EG0007.9-PA | 738 | GG18560-PA | 162..340 | 276..448 | 195 | 29.9 | Plus |
Dere\GG16283-PA | 439 | GG16283-PA | 222..391 | 286..452 | 154 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11175-PA | 510 | GH11175-PA | 1..510 | 1..503 | 2103 | 75.6 | Plus |
Dgri\GH24818-PA | 729 | GH24818-PA | 163..339 | 276..443 | 195 | 29.9 | Plus |
Dgri\GH16775-PA | 449 | GH16775-PA | 230..386 | 289..444 | 170 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(2)10685-PA | 503 | CG4749-PA | 1..503 | 1..503 | 2660 | 100 | Plus |
Nsun2-PA | 746 | CG6133-PA | 162..339 | 276..443 | 196 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17979-PA | 512 | GI17979-PA | 1..511 | 1..502 | 2151 | 77.1 | Plus |
Dmoj\GI16150-PA | 725 | GI16150-PA | 163..341 | 276..443 | 204 | 29.3 | Plus |
Dmoj\GI13435-PA | 443 | GI13435-PA | 222..384 | 285..448 | 190 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15584-PA | 504 | GL15584-PA | 1..504 | 1..503 | 2290 | 84.3 | Plus |
Dper\GL21386-PA | 730 | GL21386-PA | 162..339 | 276..443 | 205 | 30.3 | Plus |
Dper\GL24972-PA | 438 | GL24972-PA | 224..385 | 285..444 | 169 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18402-PA | 504 | GA18402-PA | 1..504 | 1..503 | 2280 | 83.9 | Plus |
Dpse\GA19379-PA | 729 | GA19379-PA | 162..339 | 276..443 | 205 | 30.3 | Plus |
Dpse\GA10764-PA | 438 | GA10764-PA | 224..385 | 285..444 | 171 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16796-PA | 503 | GM16796-PA | 1..503 | 1..503 | 2668 | 97 | Plus |
Dsec\GM12703-PA | 744 | GM12703-PA | 162..339 | 276..443 | 198 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23073-PA | 361 | GD23073-PA | 30..361 | 172..503 | 1788 | 98.5 | Plus |
Dsim\GD23072-PA | 152 | GD23072-PA | 1..150 | 1..150 | 764 | 94.7 | Plus |
Dsim\EG:EG0007.9-PA | 747 | GD16312-PA | 162..339 | 276..443 | 197 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19531-PA | 510 | GJ19531-PA | 1..510 | 1..503 | 2148 | 77.5 | Plus |
Dvir\GJ16427-PA | 725 | GJ16427-PA | 163..341 | 276..443 | 196 | 29.6 | Plus |
Dvir\GJ11797-PA | 413 | GJ11797-PA | 196..354 | 286..444 | 179 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24670-PA | 505 | GK24670-PA | 1..505 | 1..503 | 2157 | 78.4 | Plus |
Dwil\GK17644-PA | 742 | GK17644-PA | 162..339 | 276..443 | 208 | 31.3 | Plus |
Dwil\GK20395-PA | 457 | GK20395-PA | 230..407 | 286..464 | 175 | 29.6 | Plus |