BDGP Sequence Production Resources |
Search the DGRC for LD40282
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 402 |
Well: | 82 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9104-RA |
Protein status: | LD40282.pep: gold |
Preliminary Size: | 1643 |
Sequenced Size: | 1685 |
Gene | Date | Evidence |
---|---|---|
CG9104 | 2001-01-01 | Release 2 assignment |
CG9104 | 2001-07-04 | Blastp of sequenced clone |
CG9104 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9104 | 2008-04-29 | Release 5.5 accounting |
CG9104 | 2008-08-15 | Release 5.9 accounting |
CG9104 | 2008-12-18 | 5.12 accounting |
1685 bp (1685 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051914
> LD40282.complete CCACCTGCTGTTAAAGCTTTGGAGTCCACTCCGCGGAAGGAAGCAGAGGA TGTGGATGCGGTGATACTGGAATCTTTTGAACGGCATGCATTCCCATACG AATGAGACGGCTGCGACGTCGACAACGGCGGGCGCGGTCACGAATGGAGC AGGCGGATCAGGAGCTGGAGCAGCGGGTGCCCATGGCAGCACGGAGGGCA AGATCCGGTGCATCTTCCTCAGCGAGTTTCATGCGACGGCGGGCTGCAAG ATAAGCTGCCAGGTTCCTGATAACTACATATCCAAGGATGTGTTCGATGC TATCAATGTTTACATCATACCCAAGCAGCATCTTCAACGCTGCATTCTCA CCGTCAACGCAATGGATGTAAAGATAGTCGGCTATCCAGTGGGCATCCAG GATCAGCAGAAGTACGCACGGAATGCCTTCCTGTTTAACCTATGCTTTGT CTGCGACTCGCGGGCCAGGAGCGTCCAGTACGAGCCGGTCGTCAAGAAGC TGTCCGAGTACCTCATAATGATGGAGGAGGAGTCGTGCTTCCTGTCTCGC GAAGATGACAAGCGCCGCCTACAGAACATCTTTGAGACTGTACTACGCGA CCTTAACGAGCGGAAGGTGGCCACCATTGTTGAGGGCGATAACACTATAT ACCTGAAGATCGTCATGCACAAGCCGGACCCGCCGCCGGTCAAGGATCAC ATGGTGCCCCTGCTGCTGGCGAACCTGCGCGATGCTCCGCTGGACAACTG GGACCTTACCACACAACAGATCCTGCCTTATATAAATGGAATCAACCATG TTGCCCGCATTGCCGCCGAAGCGGACGTGGAAACGGACCTGGTCAAGTCG TGCATACAGAATCTGGTCTACTACGGGGTCGTTCAGCTGCTGCCAATCCT GAAGTACAGCAACGTGTACATGACGCAGAACCTAAAGCATCTCATCCAGA GCGCATCACTGAGCGGCGCATGCCGGAAATACGTGGCCTTGCGTCCGGAC AAGACGCTGCCCAGTGTTCAGCGCATCTTTCAGTTCTACGCCTCGATGAC TCACGGCGTTACTCTGCGAGCGATCTGCCAGAGATTGTGCCCCCAGCACC ACAACATCGATGAGCGTCGCATGGTGATCTTCGGGCTGCAGCACCGATTC ATTCGCTGCATCCACAAGTACCCGGTGTTTACGGGCTCAGTGCCTTCCGG GCGGCAGAAGATGTACACCGGGCTGATCAGCTTTGACGAGATCTGCTGCA AGACGGGCCTCTCGCCCTGCACCATCGAGCGGGATATCGAGAAGGACACG AATGTGACTGTGATCTGGAAGTGACGACCGGAAGGACTTCTCCGGCCAGT TGGGTTTGTTGTAGTTTGTAAGCGAACCGATTGTTATGTTTCCAAATGCT TTTTTATATACGCGCATATACACATTAAAGTTTAAGAATTCACTGGTTTG GCTTGGGCTGGTTCCGGAATCGCTTTGCCAGCTGGACAGCAATCAGGAAT CCTTTGCGCTAGAGATAATGCAATCCTGAACCGCCTGGGCCACACAGGCG TCCTCCGAGGCCATGCCTTAAATAGGAAATGTATGAAATTTTTAATGATA CAACTTTGAAACAGACAGAGATAGTCATATAGTTACACAAACTTAATAAA AACGCACCCATGGATTGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9104-RA | 1783 | CG9104-RA | 81..1750 | 1..1670 | 8350 | 100 | Plus |
CG9104.a | 1601 | CG9104.a | 260..1601 | 326..1667 | 6710 | 100 | Plus |
CG9104.a | 1601 | CG9104.a | 1..262 | 1..262 | 1310 | 100 | Plus |
CG4872.a | 1244 | CG4872.a | 1055..1244 | 1567..1378 | 950 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16772136..16773035 | 1667..768 | 4455 | 99.7 | Minus |
chrX | 22417052 | chrX | 16773122..16773631 | 769..260 | 2535 | 99.8 | Minus |
chrX | 22417052 | chrX | 16773689..16773952 | 264..1 | 1305 | 99.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 16882506..16883408 | 1670..768 | 4515 | 100 | Minus |
X | 23542271 | X | 16883495..16884004 | 769..260 | 2550 | 100 | Minus |
X | 23542271 | X | 16884062..16884325 | 264..1 | 1320 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 16890604..16891506 | 1670..768 | 4515 | 100 | Minus |
X | 23527363 | X | 16891593..16892102 | 769..260 | 2550 | 100 | Minus |
X | 23527363 | X | 16892160..16892423 | 264..1 | 1320 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16772136..16773033 | 770..1667 | 99 | <- | Minus |
chrX | 16773122..16773628 | 263..769 | 99 | <- | Minus |
chrX | 16773691..16773952 | 1..262 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9104-RA | 1..1239 | 86..1324 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9104-RA | 1..1239 | 86..1324 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9104-RA | 1..1239 | 86..1324 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9104-RA | 1..1239 | 86..1324 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9104-RA | 1..1239 | 86..1324 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9104-RA | 1..1664 | 1..1664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9104-RA | 1..1664 | 1..1664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9104-RA | 41..1707 | 1..1667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9104-RA | 1..1664 | 1..1664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9104-RA | 41..1707 | 1..1667 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16882509..16883406 | 770..1667 | 100 | <- | Minus |
X | 16883495..16884001 | 263..769 | 100 | <- | Minus |
X | 16884064..16884325 | 1..262 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16882509..16883406 | 770..1667 | 100 | <- | Minus |
X | 16883495..16884001 | 263..769 | 100 | <- | Minus |
X | 16884064..16884325 | 1..262 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16882509..16883406 | 770..1667 | 100 | <- | Minus |
X | 16883495..16884001 | 263..769 | 100 | <- | Minus |
X | 16884064..16884325 | 1..262 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16778097..16778358 | 1..262 | 100 | Minus | |
arm_X | 16776542..16777439 | 770..1667 | 100 | <- | Minus |
arm_X | 16777528..16778034 | 263..769 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16892162..16892423 | 1..262 | 100 | Minus | |
X | 16890607..16891504 | 770..1667 | 100 | <- | Minus |
X | 16891593..16892099 | 263..769 | 100 | <- | Minus |
Translation from 85 to 1323
> LD40282.hyp MHSHTNETAATSTTAGAVTNGAGGSGAGAAGAHGSTEGKIRCIFLSEFHA TAGCKISCQVPDNYISKDVFDAINVYIIPKQHLQRCILTVNAMDVKIVGY PVGIQDQQKYARNAFLFNLCFVCDSRARSVQYEPVVKKLSEYLIMMEEES CFLSREDDKRRLQNIFETVLRDLNERKVATIVEGDNTIYLKIVMHKPDPP PVKDHMVPLLLANLRDAPLDNWDLTTQQILPYINGINHVARIAAEADVET DLVKSCIQNLVYYGVVQLLPILKYSNVYMTQNLKHLIQSASLSGACRKYV ALRPDKTLPSVQRIFQFYASMTHGVTLRAICQRLCPQHHNIDERRMVIFG LQHRFIRCIHKYPVFTGSVPSGRQKMYTGLISFDEICCKTGLSPCTIERD IEKDTNVTVIWK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9104-PA | 412 | CG9104-PA | 1..412 | 1..412 | 2168 | 100 | Plus |
Translation from 85 to 1323
> LD40282.pep MHSHTNETAATSTTAGAVTNGAGGSGAGAAGAHGSTEGKIRCIFLSEFHA TAGCKISCQVPDNYISKDVFDAINVYIIPKQHLQRCILTVNAMDVKIVGY PVGIQDQQKYARNAFLFNLCFVCDSRARSVQYEPVVKKLSEYLIMMEEES CFLSREDDKRRLQNIFETVLRDLNERKVATIVEGDNTIYLKIVMHKPDPP PVKDHMVPLLLANLRDAPLDNWDLTTQQILPYINGINHVARIAAEADVET DLVKSCIQNLVYYGVVQLLPILKYSNVYMTQNLKHLIQSASLSGACRKYV ALRPDKTLPSVQRIFQFYASMTHGVTLRAICQRLCPQHHNIDERRMVIFG LQHRFIRCIHKYPVFTGSVPSGRQKMYTGLISFDEICCKTGLSPCTIERD IEKDTNVTVIWK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21822-PA | 418 | GF21822-PA | 1..418 | 1..412 | 1999 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18217-PA | 414 | GG18217-PA | 1..414 | 1..412 | 2198 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11927-PA | 402 | GH11927-PA | 2..402 | 1..412 | 1892 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nprl2-PA | 412 | CG9104-PA | 1..412 | 1..412 | 2168 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15348-PA | 390 | GI15348-PA | 3..390 | 25..412 | 1946 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22789-PA | 393 | GL22789-PA | 1..393 | 1..412 | 2038 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21545-PA | 393 | GA21545-PA | 1..393 | 1..412 | 2043 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13358-PA | 412 | GM13358-PA | 1..412 | 1..412 | 2215 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15716-PA | 412 | GD15716-PA | 1..412 | 1..412 | 2225 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19452-PA | 393 | GJ19452-PA | 1..393 | 1..412 | 2001 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25826-PA | 392 | GK25826-PA | 8..392 | 28..412 | 1958 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15636-PA | 412 | GE15636-PA | 1..412 | 1..412 | 2207 | 98.8 | Plus |