Clone LD40310 Report

Search the DGRC for LD40310

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:403
Well:10
Vector:pOT2
Associated Gene/Transcriptlid-RB
Protein status:LD40310.pep: gold
Preliminary Size:5720
Sequenced Size:5965

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9088 2001-01-01 Release 2 assignment
CG9088 2002-04-04 Blastp of sequenced clone
CG9088 2003-01-01 Sim4 clustering to Release 3
lid 2008-04-29 Release 5.5 accounting
lid 2008-08-15 Release 5.9 accounting
lid 2008-12-18 5.12 accounting

Clone Sequence Records

LD40310.complete Sequence

5965 bp (5965 high quality bases) assembled on 2002-04-04

GenBank Submission: AY095051

> LD40310.complete
GCACTTCGACGACGGGTCACACTGGACACATGTAGCAGGAAAAAACGCAG
ACATCGGAGAAAGAAATCAGAAAAGTAAATTCGCATTAAAGCCACCTCGC
CAGTGCCGTGCTCGGTGGTTTTATGGAACACTCATTTCGATCACATACCG
AGCGTGCGCGTCTTCCAACGACTTCCTATGACGACAAACCGAGCGGAATA
AATTTAATCTGAACTCATCTTAAAGCTATGTCCGCCAAAACTGAGGCGGA
CAACACGACGGCCGCCAACTCCGGCGGCGGAGGAGTCGGGAGCGGCACCT
CATCCGGCGGGGGCGCATCCGCGAATGGAACAGCAACTCCGGCACGTCGT
CTGCGTACCCGAAACTCAACGGGCAACGGGACTAATAGTGGAAGTGAGTC
CGTAAAGAAATCCAATGCTAACGACGAGCCCTCGACCCCAGTCACCCCGG
CAGGAGCAACAGGATCTCACACCCATGCTCCGCCAGGCATTTCTCCGGCG
GTAATGGAACGGCCTATGCCCAGTGTTCCCATGAATCACGCCAGCAGCAG
TGTGTCAGCCAGCAAAAAGTACCATAATAGTTGTCCTCATCCCACGCCCA
CGCCTGCGCCCACTGGGCACAAGAAGTCGGTCCACACGCAGCCGCACAGC
AGCAACAAGTTTGACCAGGGAAAGAACGAGGAGTTCCACTTTGACACGCC
GCCAGAGTGCCCTGTGTTCCGGCCCACAACTGAGGAGTTCAAGAATCCAC
TGGCCTACATCAGCAAGATCCGCTCCATAGCTGAGAAGTGTGGAATCGCA
AAGATCCTGCCGCCGGCAACCTGGTCGCCGCCGTTTGCAGTGGACGTGGA
CAAGCTACGCTTTGTGCCACGTGTCCAGCGGCTGAATGAGCTCGAGGCAA
AGACGCGCGTCAAACTCAACTTCCTTGATCAGATCGCAAAGTTCTGGGAG
CTGCAAGGCTCTTCACTAAAGATCCCAATGGTGGAGCGAAAGGCTCTCGA
CTTGTACACACTGCACCGCATCGTTCAGGAGGAGGGGGGCATGGAGCAAA
CCACAAAGGATCGCAAGTGGGCCAAGGTGGCCAACCGGATGCAGTACCCC
TCAAGCAAAAGTGTTGGCGCAACCCTGAAGGCACACTACGAACGCATCTT
GCACCCCTTTGAGGTATACACTTCGGGAAAGGTTCTAGGACCCACACCAA
CGTCGTCTGGATCTGGTAGCACACCCGTCAAATTGGAGGACGGAGGTGGA
ACCGATTACAAAGCCCATGAAATTCCCACACGGCAGCAGATTGCGCCGCC
CAACGAGACAAACACACGTCGCTCCAAGCGTTTCGGAAATTCCAATGCCA
GCTGCGGCCTGAGTGGTGTTACACCCACAACAAAGCCATCAGCGGGCGTA
TTTGTCAAGACGGAGACCAAGGAAGAATTTAAGAGGGATCTTCTCAGCAG
TTTCAATGCTGTCAACAGCGGCGGATCGCCATTAGCCACAGGTACTACGG
CAAACACTCGCGGAGCCAGCCAGAAGAAGGGAGGAGAGCCTCCAGCACTT
ATCGTAGACCCACTGATGAAGTACATTTGCCACATCTGCAATCGCGGCGA
CGTCGAGGAGTCAATGCTGCTTTGCGATGGCTGCGACGACAGCTACCACA
CCTTTTGCCTGTTGCCGCCTCTGACCAGCATACCCAAAGGCGAATGGCTT
TGCCCGCGCTGCGTCGTCGAGGAAGTAAGCAAACCGCAGGAGGCGTTTGG
TTTTGAACAGGCAGAGAGGGAATACACTCTGCAACAATTTGGACAAATGG
CTGACCAGTTCAAGCAAGAATACTTCCGCAAGCCGGTGCACTTGGTGCCC
ACTGAGATGGTGGAGCGCGAGTTTTGGCGCATCGTGTCATCTATCGATGA
AGACGTTACCGTTGAGTATGGGGCGGACTTGCACACAATGGATCACGGCT
CTGGTTTTCCCACTAAGAGCTCGTTATATTTGTTGCCGGGCGACCAAGAG
TATGCAGAGTCAAGCTGGAACCTTAACAACTTGCCGTTGCTGGAGGATTC
CATTCTTGGTCACATCAATGCCGACATTAGCGGCATGAACGCTCCGTGGA
TGTATGTGGGCATGTGCTTCGCAGCCTTCTGCTGGCACAACGAGGACCAC
TGGAGCTACTCCATCAACTATCTTCACTGGGGAGAACCTAAAACCTGGTA
CGGTGTTCCGGGGTCCTGTGCTGAGCAGTTTGAAGAGACCATGAAGCAGG
CAGCTCCAGAACTTTTTTCATCACAGCCCGATCTGCTTCACCAGCTGGTG
ACCATTATGAACCCGAACATTTTGATGAACAATCGTGTACCGGTATTCCG
AACCGATCAGCATGCAGGCGAGTTTGTGATCACCTTTCCCAGGGCCTATC
ACGCAGGCTTTAACCAAGGCTATAACTTCGCGGAGGCCGTCAATTTTGCA
CCTGCCGATTGGCTGAAGATGGGGCGCGAGTGTGTTAACCACTATTCCAT
GCTGCGACGTTTCTGTGTCTTTTCGCACGACGAGCTCGTTTGCAAGATGG
CCCTGGAGCCAGCGAAACTCACATTTGGCATCGCTACTGCCTGCTACATC
GACATGGCCGAAATGGTCGACACGGAGAAGAAACTGCGCAAATCGCTTTT
GGAGTGGGGCGTTACCCGCGCAGAGCGTCGCGCCTTCGAGCTAGTAAACG
ACGATGAGCGCCATTGCCAAGAGTGCAACACCACGTGCTTCCTGTCGGCG
GTGGCCTGCGAGTGCAACGACAAGTTGATTGTCTGTTTGCGCCACTATAC
GGTACTCTGCGGCTGTGCTCCTGAGAAGCACACTCTGATATATCGTTATA
CACTGGACGAGATGCCGCTGATGCTGCAGAAACTTAAGGTGAAGGCGCAC
AGCTTCGAGCGATGGCTTTCACGTTGCCGTGACATAGTCGATGCACATAC
ACCCACCTCGGTGACCCTGCAGGAGCTGCAGGAATTGTGCAAGGAGGCCG
AGACGAAAAAGTTTCCCTCCTCGCTGCTCATCGATCGCCTTAATGCTGCG
GCCGTTGAGGCAGAGAAATGTGTCACAGTCATACAGCAACTGGGTATCAA
TAAGGTGCGAACTCGCTCGGACCACAACCAGGAGGCTGCTCAGTACAAGC
TAACCATGGAGGAGCTAGAGTTGTTCGTTCAAGAAATCGATAATCTCTGC
TGCATCATTGACGAGGGCGCTTCGGTGCGAGAGCTGCTTGTTTTGGGAAA
ACAGTTTGTGGAGCGGTCCGAGAGCCAGCTGCAATTATCGCTGGAGTCTC
TGGAGGAGAGTGAGCTGGAAACGTTAATAAACGAAGGCAGCTCCTTACGC
ATCGAACTGCAACAGCTCGACCTACTGCAAAAGCGACTGAAGCAGTGCAA
GTGGTACAAGCGCTCGCAGGGATTGAGGGAGACCAGCTCGAAGCTGACCT
ACCAAGACGTGAAGAACCTGTTACACATTGCGGCTGCTGACCTTGATCCC
ACGGATCCGTATGTCGACAAGGAGATGCGAAAATTGCAACAGATCGGTGC
AGATATCGAAGCCTGGGAGTCGCAGGCGGCCAAGTATTTCCGGCGACTGA
CCCAACAGCACGAACTGGGCGAAATTGAGCAGTTCTTGAAATCGGCCTCC
GACATCAACGGTCAAGTGCCTTCGCATGGACTGCTGAAGGATGCACTACG
AAAGGCGCGTGAGTGGCTACGGGCCGTTGAGCAGCTACAGCAAAACAACC
ACGTCACATATTGCCACACACTGGAGGCAATGATCGAGCGCGGCTTGAAC
ATACCCATCCAGCTGGAGGAGCTGAGCCGAATGCAGGGACACCTAAATAG
TGCACATCAATGGAAGGACAATACAGCGTGCGCCTTCCTCAAGAAGGGCA
CCTTCTATACGCTCTTGGAGGTTCTCATGCCCCGGTCGGACGCCATCAAC
ATAGACTCGGATCTCAAGCCGCGCTTCCAGGATGATTTTCTGAAAGAGAA
AAATCCGGCGGAGATTGTGGCCAGCTTCAAGCACGCTGAGGAGCAGGAGC
TGCTCGATATGCGCGAACTTCGGCGGCAAAATATGAACAAGAATCCCATG
CGCGATATGTTCTGCTTGTGCAAGTCCGAGTTCCGAAACTTAATGTTCAA
TTGTCAGTTGTGCCGCGATTGGTTTCACGAGGATTGCGTCCCACCGCCAT
CAGCCACAAATCAAAATGGAATTGTTAACGGCGGATCAGGACCAGGTACC
AATCGACCCAAGTGGCTATGTCCGAGCTGTGTGCGCTCGAAGAGACCGCG
CCTAGAAACCATCCTTCCGCTACTTGTCCAGCTGCAGCAACTGCCCATCC
GTCTGCCCGAGGACGAAGCGTTGCGTTGCCTGGCGGAGCGTGCGATGAAC
TGGCAGGATCGGGCCAGGAAAGCTCTTAGCAGTCCTGACGTCAGTGCGGC
TCAAGAAGCGATTATGGCGCAGCAGCAGCAGAAGCGGCGCTCCGAGGGTG
GAGCAGGGGTGGGAAATATCAGCAGTCCACGGAAGCCACGTCGACGGGGG
AGCCTGACGAAAGAGGCAAGTGGTTCAACAGAGTCCGATGCCGACGACGA
TGACGACGAGGACGAATGTCGTCTTCGAATCGTCGAAGACAACTTTAGTA
ACGATGAAGATGAGCCTCGTACCGCCCCCGCGACCTCCACCGTCAACTCC
GATCTCCTCAAGCTGCTGTCCGACAGTGAAATTGAAAATTTGCTTGACCT
GATGATGGAGGGCGACCTGCTAGAGGTATCCTTAGATGAAACGCAGGAGC
TGTGGCGCATTCTAGAAACGATGCCGCCCACGTTGCTGCAGGCGGAGGCC
ATGGAGCGTGTTGTCCAGTACATGCAGCGTCAGCGGCAACAGCATACAAA
TCCGCTGCCAACATCCGGCGCCGAAGACTCTAACGATAGTCTGATGGTAC
AAAATAGTCCCAATAGCAACAGCAATAGTGGCGGGGCAACGGGTTCTGCG
AGCAACAGCGGACGCAACAAGAAGAGGCGCTCCAACGACACCGGCGGCAA
CTCGGCAGTGCCGCGCAAGAAGCAGAGCACACCGAAGCAGACACCGGGCA
AGAAGGGATCAGCGGCAGCGGCACGCAAGAGCGATGCCAAGGCATCGCCA
GCAGCATCCACCACTCCGGGTGCGGATGCCGATGCCGAGAATAAGCAGGC
CAACGGCGGTAATACGAACTCCAGTACAGGATCAGGTGGTGGCAATTCTG
CGACGACGACGCCCACACCCGGCTCGACGCACAAAAAGCGAAAGCGCACC
TCAACCACAGCCACCAATAATAACAACAACAATAATAATAACAGCACGAA
CAATAGCAACAGCAGTACCAATTTGAACAGCAACACCACCAGCGGCCAGG
GAGCAGCTACTGGAGGCAATAATGCGACTGGCGGTCAGAAGAAGCACGCG
CAACGGTCTCAACAGGCGGCGCAGGAGGACGACGAGGAGGAGTGCCGGGC
GGAGAACTGCCACAAGCCAACCGGGCGAGAGGTGGACTGGGTGCAGTGCG
ACGGCGGCTGCAACGAATGGTTCCACATGTACTGTGTGGGCCTCAATCGC
AGCCAGATAAAGCCCGACGACGACTATATCTGCATTCGATGCACAAAGAC
AGTTGCCATCGGAACACAGGGCTCCGGTCACAGTATGAGCGTGGCGTCCA
CGACGACGCCGGGCAAGCAGCGGGCGGTGCAATCGGCGCGGTAGAGTAAC
GTATATAGAGTCCAGGAGGTGCAGTAACAGCCGATTGTGTTTTACGCATG
ATGTACTACTAAATACCCGATAAAGGCCGTCTACCGGTATTTACTAAGTT
TAGTAAAGTCACTTGAGAGTTTTTGTAGTACATATTTACCAATTATCGCT
ATATTTACGCATTAACAACGTAAAACACATTTGAAAGAAAACGTCAAAAA
AAAAAAAAAAAAAAA

LD40310.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:01:48
Subject Length Description Subject Range Query Range Score Percent Strand
lid-RA 6435 lid-RA 390..6351 1..5962 29780 99.9 Plus
lid.e 6989 lid.e 14..5975 1..5962 29780 99.9 Plus
lid.b 6550 lid.b 14..5975 1..5962 29780 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:29:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5989492..5991459 5945..3978 9840 100 Minus
chr2L 23010047 chr2L 5994079..5995582 1690..187 7520 100 Minus
chr2L 23010047 chr2L 5992521..5993939 3106..1688 7095 100 Minus
chr2L 23010047 chr2L 5991520..5992398 3981..3103 4395 100 Minus
chr2L 23010047 chr2L 5998349..5998534 186..1 930 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:35:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5990424..5992408 5962..3978 9895 99.9 Minus
2L 23513712 2L 5995028..5996531 1690..187 7520 100 Minus
2L 23513712 2L 5993470..5994888 3106..1688 7095 100 Minus
2L 23513712 2L 5992469..5993347 3981..3103 4395 100 Minus
2L 23513712 2L 5999298..5999483 186..1 930 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:57:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5990424..5992408 5962..3978 9895 99.8 Minus
2L 23513712 2L 5995028..5996531 1690..187 7520 100 Minus
2L 23513712 2L 5993470..5994888 3106..1688 7095 100 Minus
2L 23513712 2L 5992469..5993347 3981..3103 4395 100 Minus
2L 23513712 2L 5999298..5999483 186..1 930 100 Minus
Blast to na_te.dros performed 2019-03-15 22:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6688..6864 5223..5388 166 59.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..7029 4961..5270 159 56.2 Plus

LD40310.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:30:26 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5989504..5991456 3981..5933 97 <- Minus
chr2L 5991521..5992396 3105..3980 100 <- Minus
chr2L 5992523..5993937 1690..3104 100 <- Minus
chr2L 5994080..5995582 187..1689 100 <- Minus
chr2L 5998349..5998534 1..186 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:22:37 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RB 1..5517 228..5744 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:58:08 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RB 1..5517 228..5744 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:22:29 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RC 1..5517 228..5744 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:58:07 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RB 1..5517 228..5744 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:25:09 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RD 1..5517 228..5744 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:23:19 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RA 1..5945 1..5945 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:58:08 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RA 1..5945 1..5945 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:22:29 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RA 19..5963 1..5945 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:58:07 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RA 1..5945 1..5945 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:25:09 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
lid-RA 19..5963 1..5945 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:30:26 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5990441..5992405 3981..5945 100 <- Minus
2L 5992470..5993345 3105..3980 100 <- Minus
2L 5993472..5994886 1690..3104 100 <- Minus
2L 5995029..5996531 187..1689 100 <- Minus
2L 5999298..5999483 1..186 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:30:26 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5990441..5992405 3981..5945 100 <- Minus
2L 5992470..5993345 3105..3980 100 <- Minus
2L 5993472..5994886 1690..3104 100 <- Minus
2L 5995029..5996531 187..1689 100 <- Minus
2L 5999298..5999483 1..186 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:30:26 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5990441..5992405 3981..5945 100 <- Minus
2L 5992470..5993345 3105..3980 100 <- Minus
2L 5993472..5994886 1690..3104 100 <- Minus
2L 5995029..5996531 187..1689 100 <- Minus
2L 5999298..5999483 1..186 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:22:29 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5990441..5992405 3981..5945 100 <- Minus
arm_2L 5992470..5993345 3105..3980 100 <- Minus
arm_2L 5993472..5994886 1690..3104 100 <- Minus
arm_2L 5995029..5996531 187..1689 100 <- Minus
arm_2L 5999298..5999483 1..186 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:34:17 Download gff for LD40310.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5995029..5996531 187..1689 100 <- Minus
2L 5999298..5999483 1..186 100   Minus
2L 5990441..5992405 3981..5945 100 <- Minus
2L 5992470..5993345 3105..3980 100 <- Minus
2L 5993472..5994886 1690..3104 100 <- Minus

LD40310.pep Sequence

Translation from 227 to 5743

> LD40310.pep
MSAKTEADNTTAANSGGGGVGSGTSSGGGASANGTATPARRLRTRNSTGN
GTNSGSESVKKSNANDEPSTPVTPAGATGSHTHAPPGISPAVMERPMPSV
PMNHASSSVSASKKYHNSCPHPTPTPAPTGHKKSVHTQPHSSNKFDQGKN
EEFHFDTPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWS
PPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIP
MVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATL
KAHYERILHPFEVYTSGKVLGPTPTSSGSGSTPVKLEDGGGTDYKAHEIP
TRQQIAPPNETNTRRSKRFGNSNASCGLSGVTPTTKPSAGVFVKTETKEE
FKRDLLSSFNAVNSGGSPLATGTTANTRGASQKKGGEPPALIVDPLMKYI
CHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEV
SKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFW
RIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLN
NLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLH
WGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILM
NNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGR
ECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTE
KKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKL
IVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRC
RDIVDAHTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAAAVEAEKCVT
VIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASV
RELLVLGKQFVERSESQLQLSLESLEESELETLINEGSSLRIELQQLDLL
QKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLHIAAADLDPTDPYVDKEM
RKLQQIGADIEAWESQAAKYFRRLTQQHELGEIEQFLKSASDINGQVPSH
GLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLNIPIQLEELS
RMQGHLNSAHQWKDNTACAFLKKGTFYTLLEVLMPRSDAINIDSDLKPRF
QDDFLKEKNPAEIVASFKHAEEQELLDMRELRRQNMNKNPMRDMFCLCKS
EFRNLMFNCQLCRDWFHEDCVPPPSATNQNGIVNGGSGPGTNRPKWLCPS
CVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKAL
SSPDVSAAQEAIMAQQQQKRRSEGGAGVGNISSPRKPRRRGSLTKEASGS
TESDADDDDDEDECRLRIVEDNFSNDEDEPRTAPATSTVNSDLLKLLSDS
EIENLLDLMMEGDLLEVSLDETQELWRILETMPPTLLQAEAMERVVQYMQ
RQRQQHTNPLPTSGAEDSNDSLMVQNSPNSNSNSGGATGSASNSGRNKKR
RSNDTGGNSAVPRKKQSTPKQTPGKKGSAAAARKSDAKASPAASTTPGAD
ADAENKQANGGNTNSSTGSGGGNSATTTPTPGSTHKKRKRTSTTATNNNN
NNNNNSTNNSNSSTNLNSNTTSGQGAATGGNNATGGQKKHAQRSQQAAQE
DDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKPDDDY
ICIRCTKTVAIGTQGSGHSMSVASTTTPGKQRAVQSAR*

LD40310.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:30:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14289-PA 1840 GF14289-PA 1..1840 1..1838 7991 86.5 Plus
Dana\GF12967-PA 497 GF12967-PA 91..302 517..753 387 38 Plus
Dana\GF25139-PA 2342 GF25139-PA 1953..2334 514..891 362 27 Plus
Dana\GF11231-PA 495 GF11231-PA 100..308 517..750 357 34.9 Plus
Dana\GF25139-PA 2342 GF25139-PA 1731..1862 160..291 202 33.1 Plus
Dana\GF12391-PA 3047 GF12391-PA 2537..2587 446..496 175 49 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:30:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24264-PA 1840 GG24264-PA 1..1840 1..1838 9771 97.6 Plus
Dere\GG22520-PA 635 GG22520-PA 87..302 513..753 401 37.3 Plus
Dere\GG15383-PA 2341 GG15383-PA 1952..2331 514..889 358 27.2 Plus
Dere\GG10700-PA 495 GG10700-PA 100..308 517..750 354 34.9 Plus
Dere\GG15383-PA 2341 GG15383-PA 1730..1861 160..291 205 33.8 Plus
Dere\GG22641-PA 3148 GG22641-PA 2650..2695 451..496 167 50 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:30:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10714-PA 1920 GH10714-PA 1..1920 1..1838 7373 77.4 Plus
Dgri\GH24950-PA 616 GH24950-PA 89..297 517..750 383 37.2 Plus
Dgri\GH15241-PA 2584 GH15241-PA 2191..2571 514..889 358 26.6 Plus
Dgri\GH20585-PA 497 GH20585-PA 76..308 493..750 357 33.5 Plus
Dgri\GH15241-PA 2584 GH15241-PA 1968..2124 160..315 204 31 Plus
Dgri\GH20497-PA 3415 GH20497-PA 2877..2922 451..496 165 50 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:22:24
Subject Length Description Subject Range Query Range Score Percent Strand
lid-PF 1838 CG9088-PF 1..1838 1..1838 9728 100 Plus
lid-PE 1838 CG9088-PE 1..1838 1..1838 9728 100 Plus
lid-PD 1838 CG9088-PD 1..1838 1..1838 9728 100 Plus
lid-PC 1838 CG9088-PC 1..1838 1..1838 9728 100 Plus
lid-PB 1838 CG9088-PB 1..1838 1..1838 9728 100 Plus
lid-PA 1838 CG9088-PA 1..1838 1..1838 9728 100 Plus
Kdm4B-PD 590 CG33182-PD 87..302 513..753 395 36.5 Plus
Kdm4B-PC 590 CG33182-PC 87..302 513..753 395 36.5 Plus
Kdm4B-PB 590 CG33182-PB 87..302 513..753 395 36.5 Plus
Kdm4B-PA 590 CG33182-PA 87..302 513..753 395 36.5 Plus
Kdm4B-PE 717 CG33182-PE 87..302 513..753 395 36.5 Plus
Kdm4A-PB 489 CG15835-PB 94..308 511..750 353 34.4 Plus
Kdm4A-PA 495 CG15835-PA 94..308 511..750 353 34.4 Plus
Jarid2-PD 2351 CG3654-PD 1962..2341 514..889 332 26.6 Plus
Jarid2-PD 2351 CG3654-PD 1637..1871 52..291 208 27.8 Plus
Mur89F-PC 2158 CG4090-PC 305..497 1562..1756 180 20.5 Plus
Mur89F-PB 2159 CG4090-PB 305..497 1562..1756 180 20.5 Plus
Mur89F-PC 2158 CG4090-PC 282..465 1575..1763 170 23.2 Plus
Mur89F-PC 2158 CG4090-PC 290..492 1575..1764 170 21.7 Plus
Mur89F-PB 2159 CG4090-PB 282..465 1575..1763 170 23.2 Plus
Mur89F-PB 2159 CG4090-PB 290..492 1575..1764 170 21.7 Plus
tou-PA 2999 CG10897-PA 2504..2554 446..496 166 49 Plus
Mur89F-PC 2158 CG4090-PC 533..747 1560..1780 165 19.1 Plus
Mur89F-PB 2159 CG4090-PB 533..747 1560..1780 165 19.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:30:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11300-PA 1912 GI11300-PA 1..1912 1..1838 7490 78.5 Plus
Dmoj\GI18397-PA 625 GI18397-PA 89..297 517..750 383 37.6 Plus
Dmoj\moj32-PA 2498 GI11951-PA 2109..2488 514..889 360 26.6 Plus
Dmoj\GI19732-PA 503 GI19732-PA 102..310 517..750 348 34.5 Plus
Dmoj\moj32-PA 2498 GI11951-PA 1886..2017 160..291 205 33.1 Plus
Dmoj\GI21040-PA 2976 GI21040-PA 2615..2665 446..496 175 49 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:30:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19092-PA 1854 GL19092-PA 1..1854 1..1838 7717 83.6 Plus
Dper\GL17673-PA 451 GL17673-PA 89..300 517..753 373 36.7 Plus
Dper\GL10386-PA 492 GL10386-PA 94..310 511..752 351 32.9 Plus
Dper\GL17885-PA 739 GL17885-PA 350..731 514..891 332 26.5 Plus
Dper\GL17885-PA 739 GL17885-PA 128..281 160..312 205 31.6 Plus
Dper\GL10676-PA 3244 GL10676-PA 2873..2918 451..496 166 50 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:30:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25342-PA 1887 GA25342-PA 1..1887 1..1838 7817 84.9 Plus
Dpse\GA24867-PB 579 GA24867-PB 89..300 517..753 381 36.7 Plus
Dpse\GA28524-PA 2510 GA28524-PA 2121..2502 514..891 365 27 Plus
Dpse\GA13980-PA 492 GA13980-PA 94..310 511..752 356 33.3 Plus
Dpse\GA28524-PA 2510 GA28524-PA 1899..2030 160..291 204 33.1 Plus
Dpse\GA10623-PA 3214 GA10623-PA 2715..2765 446..496 173 49 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:30:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17977-PA 1715 GM17977-PA 1..1714 1..1714 9235 99.1 Plus
Dsec\GM20306-PA 487 GM20306-PA 87..302 513..753 395 37.3 Plus
Dsec\GM17978-PA 70 GM17978-PA 1..70 1769..1838 392 98.6 Plus
Dsec\GM25154-PA 2352 GM25154-PA 1963..2342 514..889 359 27.2 Plus
Dsec\GM20746-PA 495 GM20746-PA 100..308 517..750 354 34.9 Plus
Dsec\GM25154-PA 2352 GM25154-PA 1741..1872 160..291 205 33.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:30:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22616-PA 1091 GD22616-PA 1..1091 748..1838 5855 99.4 Plus
Dsim\GD22615-PA 745 GD22615-PA 1..721 1..721 3916 99 Plus
Dsim\GD14188-PA 2319 GD14188-PA 1930..2309 514..889 358 27.2 Plus
Dsim\GD10212-PA 495 GD10212-PA 100..308 517..750 354 34.9 Plus
Dsim\GD14188-PA 2319 GD14188-PA 1708..1839 160..291 205 33.8 Plus
Dsim\GD25895-PA 2944 GD25895-PA 2449..2499 446..496 174 49 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:30:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12537-PA 1533 GJ12537-PA 36..1533 406..1838 6003 80.3 Plus
Dvir\GJ21475-PA 624 GJ21475-PA 89..297 517..750 385 37.6 Plus
Dvir\GJ12176-PA 2442 GJ12176-PA 2053..2432 514..889 362 26.9 Plus
Dvir\GJ18422-PA 501 GJ18422-PA 101..309 517..750 345 34 Plus
Dvir\GJ12176-PA 2442 GJ12176-PA 1830..1961 160..291 204 33.1 Plus
Dvir\GJ21968-PA 3086 GJ21968-PA 2580..2630 446..496 173 49 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:30:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15405-PA 1900 GK15405-PA 1..1900 1..1838 7485 81 Plus
Dwil\GK21396-PA 461 GK21396-PA 91..299 517..750 384 37.6 Plus
Dwil\GK20560-PA 2595 GK20560-PA 2205..2587 514..891 367 27.2 Plus
Dwil\GK21350-PA 490 GK21350-PA 100..308 517..750 356 34.9 Plus
Dwil\GK20560-PA 2595 GK20560-PA 1983..2114 160..291 196 31.6 Plus
Dwil\GK22224-PA 3148 GK22224-PA 2652..2702 446..496 174 49 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:30:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18962-PA 1839 GE18962-PA 1..1839 1..1838 9815 98.2 Plus
Dyak\GE13392-PA 468 GE13392-PA 87..302 513..753 396 37.3 Plus
Dyak\GE20846-PA 2349 GE20846-PA 1960..2339 514..889 359 27.2 Plus
Dyak\GE23530-PA 495 GE23530-PA 100..308 517..750 356 35.3 Plus
Dyak\GE20846-PA 2349 GE20846-PA 1738..1869 160..291 205 33.8 Plus
Dyak\GE13512-PA 3129 GE13512-PA 2636..2681 451..496 166 50 Plus

LD40310.hyp Sequence

Translation from 227 to 5743

> LD40310.hyp
MSAKTEADNTTAANSGGGGVGSGTSSGGGASANGTATPARRLRTRNSTGN
GTNSGSESVKKSNANDEPSTPVTPAGATGSHTHAPPGISPAVMERPMPSV
PMNHASSSVSASKKYHNSCPHPTPTPAPTGHKKSVHTQPHSSNKFDQGKN
EEFHFDTPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWS
PPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIP
MVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATL
KAHYERILHPFEVYTSGKVLGPTPTSSGSGSTPVKLEDGGGTDYKAHEIP
TRQQIAPPNETNTRRSKRFGNSNASCGLSGVTPTTKPSAGVFVKTETKEE
FKRDLLSSFNAVNSGGSPLATGTTANTRGASQKKGGEPPALIVDPLMKYI
CHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEV
SKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFW
RIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLN
NLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLH
WGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILM
NNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGR
ECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTE
KKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKL
IVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRC
RDIVDAHTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAAAVEAEKCVT
VIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASV
RELLVLGKQFVERSESQLQLSLESLEESELETLINEGSSLRIELQQLDLL
QKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLHIAAADLDPTDPYVDKEM
RKLQQIGADIEAWESQAAKYFRRLTQQHELGEIEQFLKSASDINGQVPSH
GLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLNIPIQLEELS
RMQGHLNSAHQWKDNTACAFLKKGTFYTLLEVLMPRSDAINIDSDLKPRF
QDDFLKEKNPAEIVASFKHAEEQELLDMRELRRQNMNKNPMRDMFCLCKS
EFRNLMFNCQLCRDWFHEDCVPPPSATNQNGIVNGGSGPGTNRPKWLCPS
CVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKAL
SSPDVSAAQEAIMAQQQQKRRSEGGAGVGNISSPRKPRRRGSLTKEASGS
TESDADDDDDEDECRLRIVEDNFSNDEDEPRTAPATSTVNSDLLKLLSDS
EIENLLDLMMEGDLLEVSLDETQELWRILETMPPTLLQAEAMERVVQYMQ
RQRQQHTNPLPTSGAEDSNDSLMVQNSPNSNSNSGGATGSASNSGRNKKR
RSNDTGGNSAVPRKKQSTPKQTPGKKGSAAAARKSDAKASPAASTTPGAD
ADAENKQANGGNTNSSTGSGGGNSATTTPTPGSTHKKRKRTSTTATNNNN
NNNNNSTNNSNSSTNLNSNTTSGQGAATGGNNATGGQKKHAQRSQQAAQE
DDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKPDDDY
ICIRCTKTVAIGTQGSGHSMSVASTTTPGKQRAVQSAR*

LD40310.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:38:31
Subject Length Description Subject Range Query Range Score Percent Strand
lid-PF 1838 CG9088-PF 1..1838 1..1838 9728 100 Plus
lid-PE 1838 CG9088-PE 1..1838 1..1838 9728 100 Plus
lid-PD 1838 CG9088-PD 1..1838 1..1838 9728 100 Plus
lid-PC 1838 CG9088-PC 1..1838 1..1838 9728 100 Plus
lid-PB 1838 CG9088-PB 1..1838 1..1838 9728 100 Plus