Clone LD40317 Report

Search the DGRC for LD40317

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:403
Well:17
Vector:pOT2
Associated Gene/TranscriptCG9727-RA
Protein status:LD40317.pep: gold
Sequenced Size:4566

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9727 2004-07-14 Blastp of sequenced clone
CG9727 2008-04-29 Release 5.5 accounting
CG9727 2008-08-15 Release 5.9 accounting
CG9727 2008-12-18 5.12 accounting

Clone Sequence Records

LD40317.complete Sequence

4566 bp assembled on 2006-11-09

GenBank Submission: BT015262

> LD40317.complete
CTCTCGTTAAAAAATGGATTATTTCGGTTCAATCGGTGCGTATCTGGGAA
AATCGCATGCTCGTTGGCAGTAAAGAACGCCACGCACTTTCACGTCCCAC
GCCCAGCGCACTCCCGCCTGACGGGAAAATGGGAAAGCAACTATATCTGG
CATCCGTATCTTCGTCCGTCGCAGCCGTCAAAATGTTCGTCGCGCCAGTT
ATCGACTCGGCAATCTCCATCTCCTAAGGCACACACACACTCAATAGAAC
GCAGTCCAGCACTCACACAGGCAGCCACCTACGTAACCTGGCAGCGGAAG
CGCCCTTAATCTTGGCCAGAAACCACAGCAGGCAGAAAACAACGAGGGAG
CAGCAGCAGGCGGAGGGAAACGGAGGCGCCGCTAGCACTAGCACCTAACA
TGTCCGAGAAGCACGGCCAGCTGGGTGCGCAGTGGACGAAATCAGCGGCG
CCAGCAGCAACAACAGCACCAGTCTCCAATTCCATTCCCATACCTCAACC
GATCCCTGTGGCACTACCCCTCCAGAAACCCAACGCCAATCCCTATGGGA
ACTGCAGCCTACAGCCCGCGGATATAGTCTACAGCGCAACCAGATTTCAA
GGACCTGCTATCCATGCAAAGGGCTCTCCTTTGACCATTACGCCCGTGGG
CCCTGTCGGCGGAGCACCTGCCTCTGCCCAGATCTCGCCCACGAGTCACA
CCCATGTACCTGTACCTGTAGCCACGCCCAGCGGCTTTGTGCCGCCTCCG
TTTTCCAATGCCACCAGCGCCAGTGGAGGTGTCTCCACTTCCGTACTTAC
TCCGAATCCCTTTGCCACGGCGAGTGCAAATGCTGCTGGCCTGGCCTTTG
CCAATGCCTTCAGCTTTAGCACAGCCCAGCAACTGGGTCTGGGCAAGATC
ATGCACGCTATGGGCGGAGCTACTGCGGGAGTGCCATCGGCGCCAGTACC
AGTCACCACGACTCCAGCGACAGCTGCTCCTTCGACCCCAACAATAGCTG
GTCCACGGCATCCGAACGAGGGCGTTCCAGCGGCCAGTGGAGTGATAAAC
TCCACCATTGCTGAAAACGTAATGAATGCTTTGAGCAACTCCAACTCAGC
GGGATCAGTTCCCAGTGAGGAGAAGATGAGAAGGGTGCTGCAGGTGATTG
AGACCAGCTTGGACGACAATGCGAAGCTGCAGATTTCACAGATTCTAGAG
CGTGTCTCGGGACTAAAGCCCATTGAGAAGCTATTCCTCTATCTTCGTTT
GCCTGGCGAATGCGCAGACACCGATCCGTTGAGGCAGCCACAAAATCCAC
TAGGAACGCGCTCGGAGATTAACCATACCATTAATTGGGTGCGTTCCCAT
CTGGAGCACGATGCACAGGTCTCCATACCAAAACAGGATGTGTACAATGA
TTACATAGCTTATTGCGAACGCCTCAGCATCAAACCTCTGTCCACAGCAG
ACTTCGGCAAGGTGATGAAGCAGGTATTTCCGGGCGTTCGTCCTCGGAGA
TTAGGGACGCGTGGAAACTCTCGCTATTGTTATGCGGCAATGCGGAAAAC
CACCAAGCTGACGCCCCCGCAACTGCCGCAGCTGTGCAAGACGGAGCAGA
TCGTAGCGGGTGATTCCAATTCGGACCCGAGTCAGCTAACTAGTGCCTCC
AGTTTGGGTGGCTTACCATCGACAGGAGGTGACTCTGAGTGCTGGGATGT
GGTGCGCAGTTGGGCAGAAAAATTGCTAAACACTAAGCTAGAGAGCGTTG
CGGATCTAAGCTCCCGTATCAAGAGCAACAATGCAACAGTTTCTACAAAA
AAATACACTCCTCGGGAGCCCAAGGAAAAGCGAGTTTTAGCAGACATTGG
ACCTTTGAAAAAGCGGCGCAAAAAGAAACGCAAGGGATCCACGTCCTCGG
AGTCCAGCTGCAATCAATTGGTAACTGGCCAAGACGCGGGTAGCAGCCAG
GAGGCCAGCGACGAACAGATACTGAAGATCAAGCAGGAGATCATCGACTC
ACCCATTCATCCCCAGCAGCCTCCAATAGGTTATCTACAGCAGGTAACGC
CCATGAACCTAGCCACAGATCAGCGAAGCAGTAGCGCTGTCCGCAACCTC
ACGCCCAAAATCCTGGAGATGGGCTCGCCGGCCGTAGTACTCACCCAGCA
GGAGGTATCCCCCACGGGCATCGTCATAAAAGATGAGGTGGAGGACTACA
CCTCTAATATTTTCTGCAAGAAGGTTTTGAAGGCGCAGCAGACAAAGGGA
TTCTGGGCGAATTCTCCAAGCAGTGGGACAACGAGCGGTGTTGGTTTACT
GGTTCCACCTACGATCACTACAACCTCGGCCACACCGCCACCGCCAAACT
CTGAGACATCCCCGGTTCCGGGACCTGGACTTTCCATGGGCCCACCCTCA
CAGATGATGAGCACCAGTTCGGTGAGTCCGTCGAGCACTGTGGACACCAC
ACCTAAAGTGGCCTCCCGAAACCAAATGATGATTCTGAGAGCCAAGCGTT
TGATGGCAGCGGAAAATGCCGCTTTGGCAGCCGCCGAAGACTCTGGATTG
CCTGAGAATCTGGGACTGCCCAGGGAGCGAGTGATAAGCATCTGTAACAT
GGACAAGCATGAGCTGGATGACTACTTTCTACCAGGCGAGGACGAGGAGA
ACTCCGAGGAGCCCGACAACGAGCTGCTCCAATATTTTCAGATGGGAGAC
GCTGAGGAAAAACAACTGAATTCCTTGGATGCTGCCGAACAGAACAAGAA
TCCACAAGAGCCACCGACGATGGGCTCTGCACCGGAGGCGATGCCCGCCC
CCGGACGCGGAGCAGCAGTCGTCGCCGCTGCAGCAGCGATGCTGGCGCCG
GTGCCGGCACCTTCGATGTTGCCCGCACAGGCAGGAGTGGGTTCTGCCTC
AGCGTCTCTGGCCCTAATGTCAAAAAAGCATCAACAGCAGAACCAGCATC
AGAACCTGCAATTGCAGCGTTCCAAGCAGCTGCCGCTTATCAGTAACAAC
AAGAGAAAGATCAGCCTCAGCAACGCCTCCAGCAATGGTAGCAACAAGAA
CTGCATTTTCCTACCAATTTCACCAAACACCAATGGATCAGTGACTACAC
CAACAGCCACAGGGTCGTCGAATCCCAGTCAAAATTGCTTCGCTAGTCCC
GGGTTGACTCGGATGAAGCAAAGACCCAACTTGTTGAGCAAGCAGCAATC
ACTTGACTGCGACAACCGGGATCCCATGATAGGGGCTCATCGCAAGGGTC
GAGGATATGTGTACAGCTACCCTACAAGCACGTCTGCCTCCGCACCACCG
AGTCCATCGATTCTTCCCCAATGGATGTGTAGAAACTGGTCGCTAGGAGG
CGGCAATATATCCAGCTTTGCAGACAGCAGCCACAGTGCTGATCCGCTGG
TCAATCAGAACTCAATGGACCTGGAGACAAGTCTGGCGCTCACGGGAGAA
AATGAGTTAGATACATCGGAGATGCAGCGCTCACAATCGGTGCCGTTGTC
ACAATTGCAACGGAGAGGCAGCCAACAATCGCCAAGCTTGAACTTCTACT
CGGAGAACAGCAACAGTCAGCAGTCTGCGCCTCTAAAAGAAACAGGATTA
CTGTACGAGGAAGTGGAAGTAGACTCGCTTCTCTCAGCGAATTTCACCAG
AAAGTTTAACAGCATAACCCAGCAAACAGCAACAACCTGCAGCTCCTCGG
CGGGCTCATCTTCCGGGTACAGTAGTGGCGGCTCTGCGGGAATTGTTTCG
CGATCAGTGCCCTCAACTCCACTGCCACATCAACAGCAAAATAGCCTCAC
ATCGTTGAATGGAGGCGGTGGTGCAGCGTCCAGCGGAGGAGGTGTCATGG
GAATCGGAAATGGGGGCAACTGTGGCGTCGGAAATGGTTTCTTCACCATC
TCTGACTCGTTTAATTGGGAAGGATCTACGTCCAATAACAGTCAGTTGGG
TTACGCACACTCCTACAGTGCCCGCAATTCACTAGACATATCCAAGTCTA
TGCCAACGACGCCCATTGCAACTCAACGTTTCCGATACAGTCCGGCGGAG
GTGCACCGCGATTTCCTCATAAATGGCAACACCATCGATAGCTTACCGTC
ATCTGCCTTTGCAGGAGGAGTTGTTCCGACCGATCCTACGCTGGCACTCA
GCACGGACACCCTCATCGACGACAGTGCCCCGAGCAGTGCAGATGTGGTT
GAGGCCATGATTGGTGTCACAGGCATACTCGACGATTTTTAGAATTTGCA
TGAAGAGAAAGCCCAGGGGGAGATCGAAATATCAGAGCAGCAGGAGCCGG
ATGCGGTGGAGGAGAACGAGGTTCAGTCAGCTGCAAAAGAGGATGCCAAT
GTGGTGGCCTGTCTGCTCCAGCATGTGGACCAATTGTAAATCCCACTATC
ATCCGCCTACTGCCGTATTGATGTCTCGTTTGATTAGTTTGTGTGTTATA
TATTAAGTAGTCCTTTATTATTGTTCCTGTTCCGAGTATATGGAATTTCT
GTTTTGCCTAGTATGAACCGAAACTCGATATAATTCAGAAATATAAAAAA
AAAAAAAAAAAAAAAA

LD40317.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:12:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG9727.b 6452 CG9727.b 184..4724 1..4541 22705 100 Plus
CG9727.a 5908 CG9727.a 184..4724 1..4541 22705 100 Plus
CG9727.f 5239 CG9727.f 184..4724 1..4541 22705 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:13:17
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 2277279..2279977 4541..1843 13495 100 Minus
chr3R 27901430 chr3R 2280987..2282149 1163..1 5800 99.9 Minus
chr3R 27901430 chr3R 2280032..2280468 1843..1407 2185 100 Minus
chr3R 27901430 chr3R 2280681..2280923 1406..1164 1215 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:35:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:13:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6451550..6454248 4541..1843 13495 100 Minus
3R 32079331 3R 6455258..6456420 1163..1 5815 100 Minus
3R 32079331 3R 6454303..6454739 1843..1407 2185 100 Minus
3R 32079331 3R 6454952..6455194 1406..1164 1215 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 6192381..6195079 4541..1843 13495 100 Minus
3R 31820162 3R 6196089..6197251 1163..1 5815 100 Minus
3R 31820162 3R 6195134..6195570 1843..1407 2185 100 Minus
3R 31820162 3R 6195783..6196025 1406..1164 1215 100 Minus
Blast to na_te.dros performed 2019-03-15 13:13:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6746..6900 317..468 136 61.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6870 317..471 130 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6732..6870 349..490 124 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1523..1559 436..472 122 81.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2480 317..472 121 57.2 Plus
roo 9092 roo DM_ROO 9092bp 1047..1146 369..471 119 61.2 Plus

LD40317.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:14:33 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 2277277..2279977 1843..4544 99 <- Minus
chr3R 2280033..2280468 1407..1842 100 <- Minus
chr3R 2280681..2280923 1164..1406 100 <- Minus
chr3R 2280987..2282149 1..1163 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:22:38 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
CG9727-RA 1..3843 400..4242 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:19:04 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
CG9727-RA 1..3843 400..4242 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:59:04 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
CG9727-RB 1..3990 400..4389 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:33:59 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
CG9727-RA 1..3843 400..4242 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:24:28 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
CG9727-RB 1..3990 400..4389 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:47:24 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
CG9727-RA 24..4265 1..4242 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:19:04 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
CG9727-RA 24..4561 1..4538 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:59:04 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
CG9727-RC 167..4709 1..4544 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:34:00 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
CG9727-RA 24..4265 1..4242 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:24:28 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
CG9727-RC 167..4709 1..4544 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:14:33 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6451548..6454248 1843..4544 99 <- Minus
3R 6454304..6454739 1407..1842 100 <- Minus
3R 6454952..6455194 1164..1406 100 <- Minus
3R 6455258..6456420 1..1163 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:14:33 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6451548..6454248 1843..4544 99 <- Minus
3R 6454304..6454739 1407..1842 100 <- Minus
3R 6454952..6455194 1164..1406 100 <- Minus
3R 6455258..6456420 1..1163 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:14:33 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6451548..6454248 1843..4544 99 <- Minus
3R 6454304..6454739 1407..1842 100 <- Minus
3R 6454952..6455194 1164..1406 100 <- Minus
3R 6455258..6456420 1..1163 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:59:04 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2277270..2279970 1843..4544 99 <- Minus
arm_3R 2280026..2280461 1407..1842 100 <- Minus
arm_3R 2280674..2280916 1164..1406 100 <- Minus
arm_3R 2280980..2282142 1..1163 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:48:33 Download gff for LD40317.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6192379..6195079 1843..4544 99 <- Minus
3R 6195135..6195570 1407..1842 100 <- Minus
3R 6195783..6196025 1164..1406 100 <- Minus
3R 6196089..6197251 1..1163 100   Minus

LD40317.pep Sequence

Translation from 399 to 4241

> LD40317.pep
MSEKHGQLGAQWTKSAAPAATTAPVSNSIPIPQPIPVALPLQKPNANPYG
NCSLQPADIVYSATRFQGPAIHAKGSPLTITPVGPVGGAPASAQISPTSH
THVPVPVATPSGFVPPPFSNATSASGGVSTSVLTPNPFATASANAAGLAF
ANAFSFSTAQQLGLGKIMHAMGGATAGVPSAPVPVTTTPATAAPSTPTIA
GPRHPNEGVPAASGVINSTIAENVMNALSNSNSAGSVPSEEKMRRVLQVI
ETSLDDNAKLQISQILERVSGLKPIEKLFLYLRLPGECADTDPLRQPQNP
LGTRSEINHTINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTA
DFGKVMKQVFPGVRPRRLGTRGNSRYCYAAMRKTTKLTPPQLPQLCKTEQ
IVAGDSNSDPSQLTSASSLGGLPSTGGDSECWDVVRSWAEKLLNTKLESV
ADLSSRIKSNNATVSTKKYTPREPKEKRVLADIGPLKKRRKKKRKGSTSS
ESSCNQLVTGQDAGSSQEASDEQILKIKQEIIDSPIHPQQPPIGYLQQVT
PMNLATDQRSSSAVRNLTPKILEMGSPAVVLTQQEVSPTGIVIKDEVEDY
TSNIFCKKVLKAQQTKGFWANSPSSGTTSGVGLLVPPTITTTSATPPPPN
SETSPVPGPGLSMGPPSQMMSTSSVSPSSTVDTTPKVASRNQMMILRAKR
LMAAENAALAAAEDSGLPENLGLPRERVISICNMDKHELDDYFLPGEDEE
NSEEPDNELLQYFQMGDAEEKQLNSLDAAEQNKNPQEPPTMGSAPEAMPA
PGRGAAVVAAAAAMLAPVPAPSMLPAQAGVGSASASLALMSKKHQQQNQH
QNLQLQRSKQLPLISNNKRKISLSNASSNGSNKNCIFLPISPNTNGSVTT
PTATGSSNPSQNCFASPGLTRMKQRPNLLSKQQSLDCDNRDPMIGAHRKG
RGYVYSYPTSTSASAPPSPSILPQWMCRNWSLGGGNISSFADSSHSADPL
VNQNSMDLETSLALTGENELDTSEMQRSQSVPLSQLQRRGSQQSPSLNFY
SENSNSQQSAPLKETGLLYEEVEVDSLLSANFTRKFNSITQQTATTCSSS
AGSSSGYSSGGSAGIVSRSVPSTPLPHQQQNSLTSLNGGGGAASSGGGVM
GIGNGGNCGVGNGFFTISDSFNWEGSTSNNSQLGYAHSYSARNSLDISKS
MPTTPIATQRFRYSPAEVHRDFLINGNTIDSLPSSAFAGGVVPTDPTLAL
STDTLIDDSAPSSADVVEAMIGVTGILDDF*

LD40317.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16654-PA 1327 GF16654-PA 1..1277 1..1266 4350 76.7 Plus
Dana\GF17463-PA 1066 GF17463-PA 527..617 293..382 204 40.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:22:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10435-PA 1278 GG10435-PA 1..1278 1..1280 5571 94.7 Plus
Dere\GG17288-PA 1089 GG17288-PA 550..635 298..382 203 41.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:22:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18082-PA 1387 GH18082-PA 1..810 1..786 2153 63.1 Plus
Dgri\GH18452-PA 918 GH18452-PA 359..444 298..382 205 41.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG9727-PC 1280 CG9727-PC 1..1280 1..1280 6570 100 Plus
CG9727-PB 1329 CG9727-PB 1..1280 1..1280 6570 100 Plus
CG9727-PA 1280 CG9727-PA 1..1280 1..1280 6570 100 Plus
Rfx-PG 860 CG6312-PG 321..459 298..427 192 33.6 Plus
Rfx-PF 882 CG6312-PF 343..481 298..427 192 33.6 Plus
Rfx-PI 889 CG6312-PI 350..488 298..427 192 33.6 Plus
Rfx-PJ 897 CG6312-PJ 358..496 298..427 192 33.6 Plus
Rfx-PC 911 CG6312-PC 372..510 298..427 192 33.6 Plus
Rfx-PH 919 CG6312-PH 380..518 298..427 192 33.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:22:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24583-PA 1378 GI24583-PA 1..1378 1..1280 2989 57.4 Plus
Dmoj\GI24030-PA 829 GI24030-PA 278..363 298..382 205 41.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:22:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22063-PA 1380 GL22063-PA 1..1322 1..1248 3533 64.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:22:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21990-PB 1344 GA21990-PB 1..1326 1..1250 3496 63.8 Plus
Dpse\GA19507-PB 884 GA19507-PB 350..435 298..382 203 41.9 Plus
Dpse\GA19507-PC 1227 GA19507-PC 693..778 298..382 202 41.9 Plus
Dpse\GA19507-PA 1241 GA19507-PA 707..792 298..382 202 41.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:22:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10553-PA 1280 GM10553-PA 1..1280 1..1280 6636 98 Plus
Dsec\GM26172-PA 1071 GM26172-PA 532..617 298..382 203 41.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:22:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19544-PA 1272 GD19544-PA 1..1272 1..1280 6585 97.4 Plus
Dsim\GD20723-PA 4013 GD20723-PA 362..456 298..391 190 36.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:22:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22650-PA 1344 GJ22650-PA 1..1344 1..1280 2963 57.8 Plus
Dvir\GJ23659-PA 880 GJ23659-PA 338..423 298..382 199 40.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:22:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13786-PA 1388 GK13786-PA 1..1339 1..1265 2882 55.3 Plus
Dwil\GK11555-PA 1147 GK11555-PA 599..684 298..382 202 41.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:22:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24099-PA 1281 GE24099-PA 1..1281 1..1280 5624 94.2 Plus
Dyak\GE24689-PA 1085 GE24689-PA 546..631 298..382 202 41.9 Plus

LD40317.hyp Sequence

Translation from 399 to 4241

> LD40317.hyp
MSEKHGQLGAQWTKSAAPAATTAPVSNSIPIPQPIPVALPLQKPNANPYG
NCSLQPADIVYSATRFQGPAIHAKGSPLTITPVGPVGGAPASAQISPTSH
THVPVPVATPSGFVPPPFSNATSASGGVSTSVLTPNPFATASANAAGLAF
ANAFSFSTAQQLGLGKIMHAMGGATAGVPSAPVPVTTTPATAAPSTPTIA
GPRHPNEGVPAASGVINSTIAENVMNALSNSNSAGSVPSEEKMRRVLQVI
ETSLDDNAKLQISQILERVSGLKPIEKLFLYLRLPGECADTDPLRQPQNP
LGTRSEINHTINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTA
DFGKVMKQVFPGVRPRRLGTRGNSRYCYAAMRKTTKLTPPQLPQLCKTEQ
IVAGDSNSDPSQLTSASSLGGLPSTGGDSECWDVVRSWAEKLLNTKLESV
ADLSSRIKSNNATVSTKKYTPREPKEKRVLADIGPLKKRRKKKRKGSTSS
ESSCNQLVTGQDAGSSQEASDEQILKIKQEIIDSPIHPQQPPIGYLQQVT
PMNLATDQRSSSAVRNLTPKILEMGSPAVVLTQQEVSPTGIVIKDEVEDY
TSNIFCKKVLKAQQTKGFWANSPSSGTTSGVGLLVPPTITTTSATPPPPN
SETSPVPGPGLSMGPPSQMMSTSSVSPSSTVDTTPKVASRNQMMILRAKR
LMAAENAALAAAEDSGLPENLGLPRERVISICNMDKHELDDYFLPGEDEE
NSEEPDNELLQYFQMGDAEEKQLNSLDAAEQNKNPQEPPTMGSAPEAMPA
PGRGAAVVAAAAAMLAPVPAPSMLPAQAGVGSASASLALMSKKHQQQNQH
QNLQLQRSKQLPLISNNKRKISLSNASSNGSNKNCIFLPISPNTNGSVTT
PTATGSSNPSQNCFASPGLTRMKQRPNLLSKQQSLDCDNRDPMIGAHRKG
RGYVYSYPTSTSASAPPSPSILPQWMCRNWSLGGGNISSFADSSHSADPL
VNQNSMDLETSLALTGENELDTSEMQRSQSVPLSQLQRRGSQQSPSLNFY
SENSNSQQSAPLKETGLLYEEVEVDSLLSANFTRKFNSITQQTATTCSSS
AGSSSGYSSGGSAGIVSRSVPSTPLPHQQQNSLTSLNGGGGAASSGGGVM
GIGNGGNCGVGNGFFTISDSFNWEGSTSNNSQLGYAHSYSARNSLDISKS
MPTTPIATQRFRYSPAEVHRDFLINGNTIDSLPSSAFAGGVVPTDPTLAL
STDTLIDDSAPSSADVVEAMIGVTGILDDF*

LD40317.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:48:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG9727-PC 1280 CG9727-PC 1..1280 1..1280 6570 100 Plus
CG9727-PB 1329 CG9727-PB 1..1280 1..1280 6570 100 Plus
CG9727-PA 1280 CG9727-PA 1..1280 1..1280 6570 100 Plus
Rfx-PG 860 CG6312-PG 321..459 298..427 192 33.6 Plus
Rfx-PF 882 CG6312-PF 343..481 298..427 192 33.6 Plus