Clone LD40380 Report

Search the DGRC for LD40380

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:403
Well:80
Vector:pOT2
Associated Gene/TranscriptBRWD3-RA
Protein status:LD40380.pep: gold
Preliminary Size:6536
Sequenced Size:7243

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6400 2001-01-01 Release 2 assignment
CG18670 2001-01-01 Release 2 assignment
CG31132 2002-08-29 Blastp of sequenced clone
CG31132 2003-01-01 Sim4 clustering to Release 3
BRWD3 2008-04-29 Release 5.5 accounting
BRWD3 2008-08-15 Release 5.9 accounting
BRWD3 2008-12-18 5.12 accounting

Clone Sequence Records

LD40380.complete Sequence

7243 bp (7243 high quality bases) assembled on 2002-08-29

GenBank Submission: AY094828

> LD40380.complete
ATCGAGTGTCACACGGGAAGAAGAAGCTGCGAAAAGAATTTTAGAAGAAA
GCAACTGCAATTTTGTCATAATCGGAGCTGCAATTCGCAATGAATAATGG
AAACTAGACAACCCAGTTCCGGTGATGATCTAAAGCCAGAGCTGTACTTC
CTCATTTCCAAGTTCCTGGCCGCGGGACCGCTGGAGGAGACGGCGAAGGT
CTTGATCCGGGAACTCGAAGAGAAGAAGGTTTTGCCGCGTCGTCTCGATT
GGCAGGGAAACGAGCATGAGCAGACCTTTGAGGAATTGGAACGAAAGTAC
AAGCACATTGGCGCCAATCACTTGCTTGAAATATGCAGTCGTCTGGGTCC
ACTGGTGGATCGCGAGCTTCCGCCCAGTGTTCCGGGCATCAACTCGCTGT
TGGGTACTGGGCGCCAGAACCTCCTGCGCACCAAGGAAACCGTCTACTGC
CATCGCTCCTTAAGGGACTACTGCACCCGCCTGAATGGAGTCTCGCTGCC
GGATTCGGTCCTTACAAAGCCGACCCACAACTTAGATCGCGTTCTAACTG
GACGGGAACACGGCGGGGAAGTCCGTCGCAAGCTCCTCGTGCCCACGGAC
CTCTACCGCCGAACAAAATTGCTCCGTCGCACTGTGGGCCACCTGTCCTC
AGTGTACTGTGTTCTGTTTGATCGCACAGGAAGATACATCATCACCGGAG
CCGATGATCTACTTATTAAGATATGGTCAGCGGCAGATGGCCGCCTGCTG
GCCACTCTGCGAGGCGCCTCATCCGAGATTACAGACATAGCCATTAACTT
GGACAATACGATGCTGGCTGCCGGGTCATTGGATCACATACTAAGAGTGT
GGGACATGCAAACCACATCACCCATCGCCGTACTGTCTGCTCACACGGGC
ATGATAACTTCGGTTAACTTTTGTCCGTCGCCACGTAGCGATCTGAAATA
TCTGGTGACTACCAGCACAGATGGATCGATCGCCTTCTGGCAATACTCAA
CGCCGCGCGGGCAAAAGATCACGTTTGCCCCGAAGCCAACGCAGTATCAT
GAGAAACTGCGGCCCGGACAAGCTCAGATGATGTGTACCACCTTTTCGCC
AGGAGGCATTTTTCTGGCCGCTGGGTCTGCCGATCACCATGTGCGCGTCT
ATATGATGGGCGAGGACGGTCCGAAGCGAATATTGGAGACGGAAGCTTAC
ACAGATGCCGTGGACTCGGTGCAGTGGTCGCATCGTGGACTGAGATTTAT
ATCGGGGAGCAAGGACGGCACAGCACACATCTGGACGTTTGAGTCGCAGC
AGTGGAAAAGTTCCAAACTATGCATGACGGAGCGTCTGGCCAGCTGCCCG
GAACCAGAGGAGGGAAAGAGGCTTAAGGTAACCATGGTGGCTTGGGATGC
CTCGGACCGTTATGTCATCACCGCCGTAAACGATTTTACTATAAAAATCT
GGGACTCGAAGTCAGCCAAGCTGCATCGTGTTCTGCGTGGGCACAAGGAT
GAGCTTTATGTGCTTGAGTCGAACCCAAGAGATGAGCATGTCCTGCTTTC
CGCCGGGCACGATGGCCAGGTATTTCTGTGGGACATCGAGCAGGGCGTTT
GTGTGGCCAACTTCCTTAACGACATCGATGGCCAAGGCCATGGCAGTGTC
TTTGATGCAAAGTGGTCACCGGATGGCACAATGATAGCTGCCACCGATTC
GCATGGACACATCCTGATTTTTGGTTTGGGCGTGTGCATTGAAAAGTACA
AAATGCTTCCCACGGAGCTGTTCTTTCACACGGATTTTCGACCTTTATTG
AGAGATGCGCAGCACCATGTGGTGGACGAGCAGACGCAGATAATGCCGCA
CCTAATGCCCCCGCCTTTCCTGGTCGATGCAGATGGCAACCCGCATCCAT
CAAGGTTTCAACGATTTGTGCCTGGTCGTGAGAGCTGTAGCCTAGACCAA
TTGATTCCAAATCTTACGGTAGGCGTGGATGGCGTAGTAATCGACGATGG
AGGTGCAGGTGGAGATGCTGTTGTGGCCGCTGCACCCGCTGAAGCTCCGC
CAGCCGCATTGCCCCCTGCTGCTGCTGGAGGACCACAGGGAGCTAACTAC
TCCCATATCGACCGCATGATTGCAGCCTTGGCCAATCGGCAGTCGGTTAA
TGTAAATGCCAATGATGCCAATCCGACCAACGGCAACCAGTCCTTCGAAC
GTTTGACCAATCGTCAAATGCCGGACTCCAATGGCAGGCAATCGTCACGT
GGCAATGTCCTGGGTAGTCGTTTGAGCACGCCTCGCCAAGGATGGGGTGC
CGCAGCTGCCGCGCCAGTTGAGGATCAAGCAGGGCCGTCTCAACCTCCGG
CAGAACCTGCAGCCGAACCTGGCCAGGCACAAGTCCAACAGGCGCTGCCT
CTGAAATTCATCCGTCGCACTTATGTGCGTCCCATGAAGTATCCCCAGTT
GCAAAACCTTAAGCAGACTATTTACTCTGCCGGTCAGTTTGAAAAGCAGG
AGTACAAACGCGAAATGCGACGCCGACCCATCATGATAAACACTGCCAGT
GCAGCATCTTCGCAGCAGCCAGGAAGCGTTGGCAGGCCACGAAACACACG
TGGCAATGGCGGCGGCGCAAGAGCTGGACGAAGACGTGGCCCCCAGCCAG
CTGGCGGACAGCCACAACCCGCTTATCGCACCCGCGCTGTTCGGGATCAG
GAGCCGGAGCACTACGATGAGGTAGCGCCGCCACCCGAGGAAGAGGAGGA
AGATGTGTCCAGCAACTCGTCCGGCGACACGAGCTACTCGAATGTGGAAG
AAAACCTAGAGGACAGCAGCGATGAGTCGGAAACGGACAGTTCCGATTAC
TCTGACTGGGTGGCGGATACTCCTGGCCCGAATCTGGAACCACCAAAACG
ATCCAAGCGTAAGCCACTCTCACGGCGACCCCGGAGTAGTGATGACAGCA
GCGATGATGAGCGAGCGGGCAGATCCAGAGGTGGGCAGGTTACGGCCCGG
AAGGTTGGACGTAAAACTGTTTTGTTTCCGCCCACAGATGCAAATGGAGA
GATACCGGAGCTTTATCGTCCCGCTGAGTGGCTATCTGAGGTGATTCCAC
GTAAGGCACCCTATTACCCCCAGATGGGTGATGAGGTAGTCTACTTCCGG
CAAGGACACGCAAAGTACTTGGATGCAGTCCGCCTGAAAAAGGTCTACAA
GCTCTCGCACAGCTCGGAGCCGTGGAACTTTCACACACTGCGCGACCACG
AGCTGGTGCGTGTGATTGGAATCAAGTACGAAATCCGCCCACCCCGATTA
TGTTGCTTGAAGTTGGCCATCATCGATGAGGAGGGCAACATGACGGGGAC
AACGTTCAAGATCAAGTACCATGACATGCCCGACGTTTTGGACTTTTTAG
TGCTGCGGCAGACCTTCGATCTTGCAGTGCAGCGCAACTGGAGCATTGGT
GACCGGTTTCGCTGCATGATTGTCGATGGCTGGTGGATGGGTCAGATTGA
ATCGCGCCACGCCCTCTCTGCTGACTTCCCCGACTCGTCCTTCATGTGTT
TCCGCGTGCGCTGGGATAATGGAGAGTATGAGTTTATGAGTCCCTGGGAC
ATGGAACCCATCGATCAGCAAAGAGTACCGGACGAGGTGGGAGGTGCTGT
TCCAGTTCTACCGGAGGAGATTCGCGCCACTCTATACCAGCCCAAGTCCG
AGGAATGGCACAGAGGGGATCGCGATGGCACCTGCAGGCGAATTATCAAT
GGATTGGAGCAGGTTATGCGTCTCTCTATCGCAGAGCATTTCCTGGCCCC
CGTGGACCTTAACATATATCCAGACTACGCTTATTTGATCGAATATCCCA
TTGACCTGACCACAATTAAATCTCGCTTTGAGAATCACTTCTACCGCAGA
ATAACCTCAGCCCAGTTCGATGTACGCTACCTAGCCACCAATGCGGAGCA
GTACAATCGCCGACACGCAATTATCGTCAAGCATTCGCGAATTGTGACAG
ATCTTTGTTTGAGGATCATCAGGGAACCGGATGAGATAGATGTGGCTGCT
GTTTACCATCAGCTTGCGGATGTGTACCATTCGTCCGAGTCGGAGAACGA
GGTAGATTCGGATGTAGTGCCATCGACCAGCACAGGGCCAACTACTTCAG
CAGCTGCAGCAGCAGCTAGGCAAAGAGTATCCTCAGCCAGGCGATCCACT
CGAATTCACTCGGAAGGAGACTGGCGTGCCGATTGTCGTCAGCTGCTTGA
TCTTATGTGGGCGAGGACAGATTCGGCGCCGTTCCGCGAGCCCGTTGACA
CCATCGACTTCCCTGACTACCTGGAGATCATAGCTACTCCAATGGATCTG
CGCACTGTAAAGGAGGATCTGCTGGGCGGCAACTACGATGATCCGTTGGA
CTTTGCCAAGGATGTGCGGCTGATCTTCCAAAACTCCAAGAACTACAACA
CCAACAAGCGCTCACGGATTTATGCCATGACCTTGCGACTCAGTGCGCTA
TTTGAGTCGCATATCAAGACAGTGGTCACCAGCTGGAAGGCGGCATTAAG
GCGCGCTAATAAAAACAAGTCCGGCAGCAGTGGAGGAGGACGCGGTGGTT
CCAGCAGCAGTCCCAACAAGCGAGTCAAAAAGGAGCGATCCACGCGCCGT
AATCAAAAGCCAACAGCAGCGGCCAGAAGATTGCCAGTCGCCAACTCCAG
TGAAGATGAGGACGAGGAGGATGATGATGATGACGACGATGATGATGATG
AGGAAGAGGCATCAACGAGGGGGCGCTCTCGTCGGCGAAACGGTGTGGCC
GTAAGTGCTAGTTCCTCTGGCTCCAATCGCGTGACTTCTTCATCCGCCGC
CCAACAGCGTCGAGGCAAAAGCAGCAGTAGCGAGGAGGAAGAGGAGGAGG
AAACCAGTGCGCAGGCCACGTCGGATGCCAGCAGCGATGAAGAGGAAAGA
GCCCAATCCAATGACAGTTCGCCCCAGCAGACACGCACGCGCAGGGCAAG
GCAGCGGCAACGGCTGAGCGATGACTCCAATATCAACGATTCCGAGGATA
GTTACAACCCCAACGAGGGACGCGGCAGTCGGCGACGTCCAGGTGCCGCA
CGCCCGTCCAGCAATAGGCAGACAAATGGCCACTCCAGCAAGAGGCGACG
TTTGAACAAAAGTCCAGCCAATGCTGCACCTGGCCCTAGTTTGCCACGTC
GGACACGTCGCATAGCAGGCAGCTCCGCAGAAGAGGCTGCATCTCACTCA
CAACACGATGAGAGCACACAGGATAGCCAGATAGGACGTCGAAAGGGACG
CTCGGCAAGCAGCAGGTCAATTGGCAATGGACCAAGTACCAGTGCCGCAG
CTGCCGCCAACTCCAGCCTTGAAAGTCCGTCACGGAATACTCGAGCCAAC
GGAACCAGGACCTCTTCGCATCTTGGAGCCGAAAATGATCACAGTTACCA
CCTGCCAGTGCGCAACGGGCGCATTATCGAGTCCGATACGGACTCTCCTG
TCATCAGACCCACGCGACAGAGCGCCAAGAGGGCGCTAATGGACTGGGGT
CGTGGAAGCGATATTGAAGAGGAGGAGGAGGAAGAGGAAGAAGACAGCGA
GGAAGCCGAGGAGATACTGCCAACACCTACAAAGGACGACTTGCCCTCTA
CCAGCCGAGCCGCTTTGGCTCAGGCGGCTGCTGGTCCTTCTCGCCAGCTA
CGCACGAACCGCAACACCGTCGTTCGTCCAGCCCAGAGTGACGACGATGA
CGACGACGACAGTGACAACGAGCCGCTGGCCAACAATCAACAAAAAAATT
ATCAATCACCTGCAAAATCTAGCTCAACCGCAACAGTGGCCCCTCATCCA
CTGAGCCTGCGCCGTCGATTAGCCTCGCCGCCAGAACGGAATACCCATAT
GACCCGTTCCCATGCCACCTCCACAACGTCCTCGGCCGCAGCATCACGGG
CAGAACAACAACCAGCGGTTTCCACCCACGATCACAACTACCTAGGCAAC
GTGAATTCATCGAGGGCACCGCGCCGCATTCTTTCACGCCACCAACGAAA
TGCCGACGAGTTGGATACCAGTCTAGATGTCCTGGAAAACTCGCGTCTGC
TCTCAGCCATAGCCAATCACCGGCGACCCACCTCTACCACGAACAGCAAC
AGTGCGAGCAACGTGGTTACAAGGCGTCTGCGTGGTCGCGCTAGCCAGGC
GAATTCGCACGACGAGGATCATGAGGAAGAGGAGGCTGCTGCTTCCGATG
AGGGCACTGATGGAGGCTCTAGCTCGCAGAGCTACGAAGATGAGGATGAA
GACTCCGACTCGGAAGACAATCAGCCGCTGACCAGCTACGTATCGCCCAG
CAATGGTCGTCCGAGGCGAAAGGCAAAAACCTCCTCCTCCTCCGCAACAA
CTCAGGAGCGTCCGCTGCGACGCACACGTCGCCCGCCATCCAATAACTCC
ATCGCGAACGACAACGATGACGATGATGACTATGTTGTGCCGCGGAGTCG
TCGCGCCAACCGGGGTGGAAACCAGCGAGCCGGGCGCAACCAAAAGAGAC
CGCGCTACAATGAGCAGTCCGAGGAGGAAGAGGCGGCGGCTGGATATTCC
CATCGGAGTAAACGAATCCGTAACGGCGACGCTCATGCCAGCTCTCAGGA
GCGATCACAGGCCTCCACCGAGCGGGACCAGGAGGAAGAAGAGGACGGTA
CTTCGGTGGACTCGGAAGAACAGCAGGTGAACGTTAGCAGCAGAGGCAGG
GTGCGCAAGCCGTCTGCCAAGGCGCGCGGTATCTTCAAGGAGTGACCGCA
GACTGTTTTATGTATAAATTAAATCTAATTGCTAAATCAACAAACCTTTG
TAACATTTGCTAGAGTCTTATTTCTTATTATTGATTAATATGTAAGAGTA
AATCACGTCACTTCTCATTGTAATGTCAGTGTCACCGCTACGGTCATTGT
CCCACACCCAACCCACCCCGATCCGTCAAATCCGTAACCCCAACCGTGAA
GTGTTAGCCCATATCCATCATACACCGTGGCAGAATATGTTCAATTAATG
TTCAAGTCTTAAGTTGAATATTGGCATCAGTCCTACATTCTATGTGTAGG
GGGCATGGCCAAAGCAACGTTTTATATGTATTTCTATAATATATAGGTAC
TATCATACATATATATTTAAAGGTAGCACTCGGAATCACACTTCATTTAA
AATAGTTTTAGAATAAAGTATCATGAAAAAAAAAAAAAAAAAA

LD40380.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:23:55
Subject Length Description Subject Range Query Range Score Percent Strand
BRWD3-RA 7429 BRWD3-RA 202..7429 1..7228 36140 100 Plus
BRWD3.c 7372 BRWD3.c 202..5001 1..4800 24000 100 Plus
BRWD3.b 7186 BRWD3.b 2990..7186 3032..7228 20970 99.9 Plus
BRWD3.b 7186 BRWD3.b 16..2995 1..2980 14900 100 Plus
BRWD3.c 7372 BRWD3.c 5002..7372 4858..7228 11855 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:58:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 20145747..20147756 1755..3764 10050 100 Plus
chr3R 27901430 chr3R 20150543..20151973 5795..7225 7155 100 Plus
chr3R 27901430 chr3R 20149100..20150249 4467..5613 5670 99.7 Plus
chr3R 27901430 chr3R 20144325..20145134 534..1343 4050 100 Plus
chr3R 27901430 chr3R 20145375..20145689 1441..1755 1575 100 Plus
chr3R 27901430 chr3R 20148355..20148629 4193..4467 1375 100 Plus
chr3R 27901430 chr3R 20147807..20148070 3760..4023 1320 100 Plus
chr3R 27901430 chr3R 20144018..20144265 288..535 1240 100 Plus
chr3R 27901430 chr3R 20150309..20150491 5612..5794 915 100 Plus
chr3R 27901430 chr3R 20148126..20148298 4021..4193 865 100 Plus
chr3R 27901430 chr3R 20142370..20142508 1..139 695 100 Plus
chr3R 27901430 chr3R 20145211..20145314 1341..1444 505 99 Plus
chr3R 27901430 chr3R 20142757..20142820 137..200 320 100 Plus
chr3R 27901430 chr3R 20143366..20143428 227..289 315 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:35:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:58:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24322396..24324405 1755..3764 10050 100 Plus
3R 32079331 3R 24327189..24328624 5795..7230 7180 100 Plus
3R 32079331 3R 24325749..24326895 4467..5613 5735 100 Plus
3R 32079331 3R 24320974..24321783 534..1343 4050 100 Plus
3R 32079331 3R 24322024..24322338 1441..1755 1575 100 Plus
3R 32079331 3R 24325004..24325278 4193..4467 1375 100 Plus
3R 32079331 3R 24324456..24324719 3760..4023 1320 100 Plus
3R 32079331 3R 24320667..24320914 288..535 1240 100 Plus
3R 32079331 3R 24326955..24327137 5612..5794 915 100 Plus
3R 32079331 3R 24324775..24324947 4021..4193 865 100 Plus
3R 32079331 3R 24319019..24319157 1..139 695 100 Plus
3R 32079331 3R 24321860..24321963 1341..1444 505 99 Plus
3R 32079331 3R 24319406..24319469 137..200 320 100 Plus
3R 32079331 3R 24320015..24320077 227..289 315 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:11:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 24063227..24065236 1755..3764 10050 100 Plus
3R 31820162 3R 24068020..24069455 5795..7230 7180 100 Plus
3R 31820162 3R 24066580..24067726 4467..5613 5735 100 Plus
3R 31820162 3R 24061805..24062614 534..1343 4050 100 Plus
3R 31820162 3R 24062855..24063169 1441..1755 1575 100 Plus
3R 31820162 3R 24065835..24066109 4193..4467 1375 100 Plus
3R 31820162 3R 24065287..24065550 3760..4023 1320 100 Plus
3R 31820162 3R 24061498..24061745 288..535 1240 100 Plus
3R 31820162 3R 24067786..24067968 5612..5794 915 100 Plus
3R 31820162 3R 24065606..24065778 4021..4193 865 100 Plus
3R 31820162 3R 24059850..24059988 1..139 695 100 Plus
3R 31820162 3R 24062691..24062794 1341..1444 505 99 Plus
3R 31820162 3R 24060237..24060300 137..200 320 100 Plus
3R 31820162 3R 24060846..24060908 227..289 315 100 Plus
3R 31820162 3R 24060421..24060454 197..230 170 100 Plus
Blast to na_te.dros performed 2019-03-16 11:58:45
Subject Length Description Subject Range Query Range Score Percent Strand
G-element 4346 G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). 555..616 5718..5776 167 79 Plus

LD40380.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:59:21 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 20145375..20145689 1441..1755 100 -> Plus
chr3R 20142370..20142508 1..139 100 -> Plus
chr3R 20142760..20142818 140..198 100 -> Plus
chr3R 20142943..20142972 199..228 100 -> Plus
chr3R 20143368..20143427 229..288 100 -> Plus
chr3R 20144019..20144265 289..535 100 -> Plus
chr3R 20144327..20145134 536..1343 100 -> Plus
chr3R 20145214..20145310 1344..1440 100 -> Plus
chr3R 20145748..20147754 1756..3762 100 -> Plus
chr3R 20147810..20148069 3763..4022 100 -> Plus
chr3R 20148128..20148298 4023..4193 100 -> Plus
chr3R 20148356..20148629 4194..4467 100 -> Plus
chr3R 20149101..20149333 4468..4700 100 == Plus
chr3R 20149385..20150198 4752..5565 100 == Plus
chr3R 20150309..20150414 5612..5717 100 == Plus
chr3R 20150474..20150491 5777..5794 100 -> Plus
chr3R 20150543..20151973 5795..7225 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:22:44 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
BRWD3-RA 1..6699 97..6795 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:48:40 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
BRWD3-RA 1..6699 97..6795 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:43:06 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
BRWD3-RA 1..6699 97..6795 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:42:30 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
BRWD3-RA 1..6699 97..6795 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:32:38 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
BRWD3-RA 1..6699 97..6795 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:35:46 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
BRWD3-RA 1..7225 1..7225 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:48:40 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
BRWD3-RA 1..7225 1..7225 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:43:06 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
BRWD3-RA 20..7244 1..7225 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:42:30 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
BRWD3-RA 1..7225 1..7225 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:32:38 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
BRWD3-RA 20..7244 1..7225 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:59:21 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24319019..24319157 1..139 100 -> Plus
3R 24319409..24319467 140..198 100 -> Plus
3R 24319592..24319621 199..228 100 -> Plus
3R 24320017..24320076 229..288 100 -> Plus
3R 24320668..24320914 289..535 100 -> Plus
3R 24320976..24321783 536..1343 100 -> Plus
3R 24321863..24321959 1344..1440 100 -> Plus
3R 24322024..24322338 1441..1755 100 -> Plus
3R 24322397..24324403 1756..3762 100 -> Plus
3R 24324459..24324718 3763..4022 100 -> Plus
3R 24324777..24324947 4023..4193 100 -> Plus
3R 24325005..24325278 4194..4467 100 -> Plus
3R 24325750..24326895 4468..5613 100 -> Plus
3R 24326957..24327137 5614..5794 100 -> Plus
3R 24327189..24328619 5795..7225 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:59:21 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24319019..24319157 1..139 100 -> Plus
3R 24319409..24319467 140..198 100 -> Plus
3R 24319592..24319621 199..228 100 -> Plus
3R 24320017..24320076 229..288 100 -> Plus
3R 24320668..24320914 289..535 100 -> Plus
3R 24320976..24321783 536..1343 100 -> Plus
3R 24321863..24321959 1344..1440 100 -> Plus
3R 24322024..24322338 1441..1755 100 -> Plus
3R 24322397..24324403 1756..3762 100 -> Plus
3R 24324459..24324718 3763..4022 100 -> Plus
3R 24324777..24324947 4023..4193 100 -> Plus
3R 24325005..24325278 4194..4467 100 -> Plus
3R 24325750..24326895 4468..5613 100 -> Plus
3R 24326957..24327137 5614..5794 100 -> Plus
3R 24327189..24328619 5795..7225 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:59:21 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24319019..24319157 1..139 100 -> Plus
3R 24319409..24319467 140..198 100 -> Plus
3R 24319592..24319621 199..228 100 -> Plus
3R 24320017..24320076 229..288 100 -> Plus
3R 24320668..24320914 289..535 100 -> Plus
3R 24320976..24321783 536..1343 100 -> Plus
3R 24321863..24321959 1344..1440 100 -> Plus
3R 24322024..24322338 1441..1755 100 -> Plus
3R 24322397..24324403 1756..3762 100 -> Plus
3R 24324459..24324718 3763..4022 100 -> Plus
3R 24324777..24324947 4023..4193 100 -> Plus
3R 24325005..24325278 4194..4467 100 -> Plus
3R 24325750..24326895 4468..5613 100 -> Plus
3R 24326957..24327137 5614..5794 100 -> Plus
3R 24327189..24328619 5795..7225 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:43:06 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20144741..20144879 1..139 100 -> Plus
arm_3R 20145131..20145189 140..198 100 -> Plus
arm_3R 20145314..20145343 199..228 100 -> Plus
arm_3R 20145739..20145798 229..288 100 -> Plus
arm_3R 20146390..20146636 289..535 100 -> Plus
arm_3R 20146698..20147505 536..1343 100 -> Plus
arm_3R 20147585..20147681 1344..1440 100 -> Plus
arm_3R 20147746..20148060 1441..1755 100 -> Plus
arm_3R 20152911..20154341 5795..7225 100   Plus
arm_3R 20148119..20150125 1756..3762 100 -> Plus
arm_3R 20150181..20150440 3763..4022 100 -> Plus
arm_3R 20150499..20150669 4023..4193 100 -> Plus
arm_3R 20150727..20151000 4194..4467 100 -> Plus
arm_3R 20151472..20152617 4468..5613 100 -> Plus
arm_3R 20152679..20152859 5614..5794 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:34:11 Download gff for LD40380.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24061499..24061745 289..535 100 -> Plus
3R 24061807..24062614 536..1343 100 -> Plus
3R 24062694..24062790 1344..1440 100 -> Plus
3R 24062855..24063169 1441..1755 100 -> Plus
3R 24063228..24065234 1756..3762 100 -> Plus
3R 24065290..24065549 3763..4022 100 -> Plus
3R 24065608..24065778 4023..4193 100 -> Plus
3R 24065836..24066109 4194..4467 100 -> Plus
3R 24066581..24067726 4468..5613 100 -> Plus
3R 24067788..24067968 5614..5794 100 -> Plus
3R 24068020..24069450 5795..7225 100   Plus
3R 24059850..24059988 1..139 100 -> Plus
3R 24060240..24060298 140..198 100 -> Plus
3R 24060423..24060452 199..228 100 -> Plus
3R 24060848..24060907 229..288 100 -> Plus

LD40380.pep Sequence

Translation from 96 to 6794

> LD40380.pep
METRQPSSGDDLKPELYFLISKFLAAGPLEETAKVLIRELEEKKVLPRRL
DWQGNEHEQTFEELERKYKHIGANHLLEICSRLGPLVDRELPPSVPGINS
LLGTGRQNLLRTKETVYCHRSLRDYCTRLNGVSLPDSVLTKPTHNLDRVL
TGREHGGEVRRKLLVPTDLYRRTKLLRRTVGHLSSVYCVLFDRTGRYIIT
GADDLLIKIWSAADGRLLATLRGASSEITDIAINLDNTMLAAGSLDHILR
VWDMQTTSPIAVLSAHTGMITSVNFCPSPRSDLKYLVTTSTDGSIAFWQY
STPRGQKITFAPKPTQYHEKLRPGQAQMMCTTFSPGGIFLAAGSADHHVR
VYMMGEDGPKRILETEAYTDAVDSVQWSHRGLRFISGSKDGTAHIWTFES
QQWKSSKLCMTERLASCPEPEEGKRLKVTMVAWDASDRYVITAVNDFTIK
IWDSKSAKLHRVLRGHKDELYVLESNPRDEHVLLSAGHDGQVFLWDIEQG
VCVANFLNDIDGQGHGSVFDAKWSPDGTMIAATDSHGHILIFGLGVCIEK
YKMLPTELFFHTDFRPLLRDAQHHVVDEQTQIMPHLMPPPFLVDADGNPH
PSRFQRFVPGRESCSLDQLIPNLTVGVDGVVIDDGGAGGDAVVAAAPAEA
PPAALPPAAAGGPQGANYSHIDRMIAALANRQSVNVNANDANPTNGNQSF
ERLTNRQMPDSNGRQSSRGNVLGSRLSTPRQGWGAAAAAPVEDQAGPSQP
PAEPAAEPGQAQVQQALPLKFIRRTYVRPMKYPQLQNLKQTIYSAGQFEK
QEYKREMRRRPIMINTASAASSQQPGSVGRPRNTRGNGGGARAGRRRGPQ
PAGGQPQPAYRTRAVRDQEPEHYDEVAPPPEEEEEDVSSNSSGDTSYSNV
EENLEDSSDESETDSSDYSDWVADTPGPNLEPPKRSKRKPLSRRPRSSDD
SSDDERAGRSRGGQVTARKVGRKTVLFPPTDANGEIPELYRPAEWLSEVI
PRKAPYYPQMGDEVVYFRQGHAKYLDAVRLKKVYKLSHSSEPWNFHTLRD
HELVRVIGIKYEIRPPRLCCLKLAIIDEEGNMTGTTFKIKYHDMPDVLDF
LVLRQTFDLAVQRNWSIGDRFRCMIVDGWWMGQIESRHALSADFPDSSFM
CFRVRWDNGEYEFMSPWDMEPIDQQRVPDEVGGAVPVLPEEIRATLYQPK
SEEWHRGDRDGTCRRIINGLEQVMRLSIAEHFLAPVDLNIYPDYAYLIEY
PIDLTTIKSRFENHFYRRITSAQFDVRYLATNAEQYNRRHAIIVKHSRIV
TDLCLRIIREPDEIDVAAVYHQLADVYHSSESENEVDSDVVPSTSTGPTT
SAAAAAARQRVSSARRSTRIHSEGDWRADCRQLLDLMWARTDSAPFREPV
DTIDFPDYLEIIATPMDLRTVKEDLLGGNYDDPLDFAKDVRLIFQNSKNY
NTNKRSRIYAMTLRLSALFESHIKTVVTSWKAALRRANKNKSGSSGGGRG
GSSSSPNKRVKKERSTRRNQKPTAAARRLPVANSSEDEDEEDDDDDDDDD
DEEEASTRGRSRRRNGVAVSASSSGSNRVTSSSAAQQRRGKSSSSEEEEE
EETSAQATSDASSDEEERAQSNDSSPQQTRTRRARQRQRLSDDSNINDSE
DSYNPNEGRGSRRRPGAARPSSNRQTNGHSSKRRRLNKSPANAAPGPSLP
RRTRRIAGSSAEEAASHSQHDESTQDSQIGRRKGRSASSRSIGNGPSTSA
AAAANSSLESPSRNTRANGTRTSSHLGAENDHSYHLPVRNGRIIESDTDS
PVIRPTRQSAKRALMDWGRGSDIEEEEEEEEEDSEEAEEILPTPTKDDLP
STSRAALAQAAAGPSRQLRTNRNTVVRPAQSDDDDDDDSDNEPLANNQQK
NYQSPAKSSSTATVAPHPLSLRRRLASPPERNTHMTRSHATSTTSSAAAS
RAEQQPAVSTHDHNYLGNVNSSRAPRRILSRHQRNADELDTSLDVLENSR
LLSAIANHRRPTSTTNSNSASNVVTRRLRGRASQANSHDEDHEEEEAAAS
DEGTDGGSSSQSYEDEDEDSDSEDNQPLTSYVSPSNGRPRRKAKTSSSSA
TTQERPLRRTRRPPSNNSIANDNDDDDDYVVPRSRRANRGGNQRAGRNQK
RPRYNEQSEEEEAAAGYSHRSKRIRNGDAHASSQERSQASTERDQEEEED
GTSVDSEEQQVNVSSRGRVRKPSAKARGIFKE*

LD40380.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:58:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20739-PA 2233 GF20739-PA 1..2233 1..2232 8674 81.7 Plus
Dana\GF23871-PA 1276 GF23871-PA 935..1252 171..535 257 24.5 Plus
Dana\GF22217-PA 361 GF22217-PA 70..357 181..495 226 25.2 Plus
Dana\GF20651-PA 698 GF20651-PA 345..695 172..544 221 21.4 Plus
Dana\GF22217-PA 361 GF22217-PA 67..327 220..515 216 23.8 Plus
Dana\GF11864-PA 411 GF11864-PA 106..409 181..496 210 23.9 Plus
Dana\GF22217-PA 361 GF22217-PA 80..279 333..551 169 25.3 Plus
Dana\GF22217-PA 361 GF22217-PA 147..331 174..372 167 24.4 Plus
Dana\GF20651-PA 698 GF20651-PA 420..664 337..552 164 24.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:58:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11279-PA 2233 GG11279-PA 1..2233 1..2232 11502 96.3 Plus
Dere\GG14203-PA 1329 GG14203-PA 988..1305 171..535 256 24.8 Plus
Dere\GG12938-PA 361 GG12938-PA 70..357 181..495 228 25.2 Plus
Dere\GG24716-PA 700 GG24716-PA 332..697 164..544 224 21.7 Plus
Dere\GG12938-PA 361 GG12938-PA 67..327 220..515 218 23.8 Plus
Dere\GG12011-PA 467 GG12011-PA 197..466 198..495 212 26.9 Plus
Dere\GG12011-PA 467 GG12011-PA 266..466 182..396 178 25.8 Plus
Dere\GG12938-PA 361 GG12938-PA 80..279 333..551 171 25.3 Plus
Dere\GG12938-PA 361 GG12938-PA 147..331 174..372 168 24.4 Plus
Dere\GG24716-PA 700 GG24716-PA 422..666 337..552 164 24.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 23:58:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18810-PA 2260 GH18810-PA 1..2260 1..2232 7881 74.5 Plus
Dgri\anon-2-PA 1411 GH15539-PA 1070..1387 171..535 250 24.5 Plus
Dgri\GH24921-PA 357 GH24921-PA 66..353 181..495 221 24.8 Plus
Dgri\GH24921-PA 357 GH24921-PA 63..323 220..515 212 23.5 Plus
Dgri\GH15383-PA 559 GH15383-PA 264..555 180..495 208 23.4 Plus
Dgri\GH22777-PA 411 GH22777-PA 106..409 181..496 207 23.6 Plus
Dgri\GH15383-PA 559 GH15383-PA 387..555 168..352 178 25.3 Plus
Dgri\GH24921-PA 357 GH24921-PA 76..275 333..551 171 25.3 Plus
Dgri\GH24921-PA 357 GH24921-PA 143..327 174..372 166 24.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:25:43
Subject Length Description Subject Range Query Range Score Percent Strand
BRWD3-PA 2232 CG31132-PA 1..2232 1..2232 11626 100 Plus
Muc68D-PB 1514 CG6004-PB 306..1057 1502..2224 291 19.3 Plus
Muc68D-PB 1514 CG6004-PB 271..957 1553..2224 277 19.6 Plus
Muc68D-PB 1514 CG6004-PB 273..1027 1502..2226 261 19.2 Plus
Muc68D-PB 1514 CG6004-PB 561..1210 1490..2126 242 19.3 Plus
Muc68D-PB 1514 CG6004-PB 455..1220 1502..2219 238 19.3 Plus
Mur89F-PC 2158 CG4090-PC 286..1033 1478..2207 236 16.9 Plus
Mur89F-PB 2159 CG4090-PB 286..1033 1478..2207 236 16.9 Plus
wds-PB 361 CG17437-PB 70..357 181..495 233 24.5 Plus
wds-PA 361 CG17437-PA 70..357 181..495 233 24.5 Plus
ago-PA 1326 CG15010-PA 985..1302 171..535 230 24.5 Plus
ago-PB 1326 CG15010-PB 985..1302 171..535 230 24.5 Plus
ago-PC 1326 CG15010-PC 985..1302 171..535 230 24.5 Plus
wds-PB 361 CG17437-PB 67..316 220..498 225 23.8 Plus
wds-PA 361 CG17437-PA 67..316 220..498 225 23.8 Plus
CG7568-PD 467 CG7568-PD 197..466 198..495 224 26 Plus
CG7568-PE 482 CG7568-PE 197..466 198..495 224 26 Plus
ebi-PA 700 CG4063-PA 324..697 156..544 223 22 Plus
tn-PC 1517 CG15105-PC 332..1013 1511..2216 215 19.3 Plus
Lis-1-PG 411 CG8440-PG 106..409 181..496 213 23.4 Plus
Lis-1-PF 411 CG8440-PF 106..409 181..496 213 23.4 Plus
Lis-1-PB 411 CG8440-PB 106..409 181..496 213 23.4 Plus
Lis-1-PA 411 CG8440-PA 106..409 181..496 213 23.4 Plus
CG7971-PG 1062 CG7971-PG 232..890 1499..2198 213 19.7 Plus
CG7971-PA 1062 CG7971-PA 232..890 1499..2198 213 19.7 Plus
CG7971-PC 1107 CG7971-PC 232..890 1499..2198 213 19.7 Plus
CG7971-PF 1655 CG7971-PF 457..1115 1499..2198 213 19.7 Plus
Mur89F-PC 2158 CG4090-PC 435..1127 1487..2215 208 18.2 Plus
Mur89F-PB 2159 CG4090-PB 435..1127 1487..2215 208 18.2 Plus
Mur89F-PC 2158 CG4090-PC 273..740 1570..2086 206 19.2 Plus
Mur89F-PB 2159 CG4090-PB 273..740 1570..2086 206 19.2 Plus
dikar-PG 3080 CG42799-PG 692..1486 1329..2118 203 17.4 Plus
dikar-PC 3080 CG42799-PC 692..1486 1329..2118 203 17.4 Plus
Cht6-PJ 4519 CG43374-PJ 2991..3649 1515..2210 203 19.3 Plus
Cht6-PC 4611 CG43374-PC 2991..3649 1515..2210 203 19.3 Plus
Muc68D-PB 1514 CG6004-PB 777..1313 1502..2044 201 19.7 Plus
alphaCOP-PA 1234 CG7961-PA 38..324 170..499 196 22.5 Plus
alphaCOP-PB 1234 CG7961-PB 38..324 170..499 196 22.5 Plus
Nopp140-PA 720 CG7421-PA 52..605 1523..2147 195 19.1 Plus
U4-U6-60K-PA 553 CG6322-PA 258..549 180..495 191 23.4 Plus
Taf5-PA 704 CG7704-PA 527..647 176..300 191 29.6 Plus
Moca-cyp-PA 970 CG1866-PA 182..859 1476..2199 190 20.1 Plus
Caf1-180-PB 1183 CG12109-PB 341..742 1490..1888 189 20 Plus
slmb-PC 510 CG3412-PC 213..488 186..496 188 24.1 Plus
slmb-PA 510 CG3412-PA 213..488 186..496 188 24.1 Plus
slmb-PB 597 CG3412-PB 213..488 186..496 188 24.1 Plus
nej-PE 3266 CG15319-PE 1669..1805 1339..1477 188 34 Plus
nej-PB 3276 CG15319-PB 1669..1805 1339..1477 188 34 Plus
nej-PD 3276 CG15319-PD 1669..1805 1339..1477 188 34 Plus
nej-PC 3282 CG15319-PC 1675..1811 1339..1477 188 34 Plus
CG7568-PD 467 CG7568-PD 117..454 182..530 187 21.7 Plus
CG7568-PE 482 CG7568-PE 117..454 182..530 187 21.7 Plus
futsch-PF 5495 CG34387-PF 2987..3723 1481..2211 187 19.5 Plus
futsch-PE 5495 CG34387-PE 2987..3723 1481..2211 187 19.5 Plus
futsch-PC 5495 CG34387-PC 2987..3723 1481..2211 187 19.5 Plus
CG9915-PC 820 CG9915-PC 177..513 1485..1848 185 24.3 Plus
CG9915-PB 820 CG9915-PB 177..513 1485..1848 185 24.3 Plus
ct-PE 2174 CG11387-PE 252..790 1512..2067 185 20.2 Plus
ct-PA 2175 CG11387-PA 252..791 1512..2067 184 20.2 Plus
dikar-PD 3222 CG42799-PD 908..1628 1392..2118 184 17.2 Plus
dikar-PF 3261 CG42799-PF 908..1628 1392..2118 184 17.2 Plus
ct-PD 2165 CG11387-PD 64..529 1512..1954 182 21.4 Plus
CG7568-PD 467 CG7568-PD 260..466 176..396 181 25.1 Plus
CG7568-PE 482 CG7568-PE 260..466 176..396 181 25.1 Plus
CG10931-PA 345 CG10931-PA 88..342 173..454 181 23.5 Plus
Nopp140-PF 685 CG7421-PF 52..678 1523..2177 181 17.6 Plus
Cht6-PJ 4519 CG43374-PJ 3142..3752 1509..2139 178 20.8 Plus
Cht6-PC 4611 CG43374-PC 3142..3752 1509..2139 178 20.8 Plus
wds-PB 361 CG17437-PB 80..279 333..551 175 25.3 Plus
wds-PB 361 CG17437-PB 147..331 174..372 175 23.9 Plus
wds-PA 361 CG17437-PA 80..279 333..551 175 25.3 Plus
wds-PA 361 CG17437-PA 147..331 174..372 175 23.9 Plus
U4-U6-60K-PA 553 CG6322-PA 381..511 168..302 175 27.4 Plus
CG9915-PC 820 CG9915-PC 109..525 1482..1901 172 20.9 Plus
CG9915-PB 820 CG9915-PB 109..525 1482..1901 172 20.9 Plus
CG10931-PA 345 CG10931-PA 51..299 220..498 168 22.1 Plus
futsch-PF 5495 CG34387-PF 3048..3797 1470..2211 166 20.3 Plus
futsch-PE 5495 CG34387-PE 3048..3797 1470..2211 166 20.3 Plus
futsch-PC 5495 CG34387-PC 3048..3797 1470..2211 166 20.3 Plus
CG7971-PG 1062 CG7971-PG 187..889 1547..2210 165 19.3 Plus
CG7971-PG 1062 CG7971-PG 229..1039 1485..2193 165 18.4 Plus
CG7971-PA 1062 CG7971-PA 187..889 1547..2210 165 19.3 Plus
CG7971-PA 1062 CG7971-PA 229..1039 1485..2193 165 18.4 Plus
CG7971-PC 1107 CG7971-PC 187..889 1547..2210 165 19.3 Plus
CG7971-PC 1107 CG7971-PC 229..1039 1485..2193 165 18.4 Plus
CG7971-PF 1655 CG7971-PF 412..1114 1547..2210 165 19.3 Plus
CG10931-PA 345 CG10931-PA 53..321 180..477 162 22 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 23:58:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10068-PA 2245 GI10068-PA 1..2245 1..2232 7931 76.2 Plus
Dmoj\GI16816-PA 1393 GI16816-PA 1052..1369 171..535 257 24.8 Plus
Dmoj\GI21774-PA 358 GI21774-PA 67..354 181..495 227 25.2 Plus
Dmoj\GI21774-PA 358 GI21774-PA 64..324 220..515 217 23.8 Plus
Dmoj\GI21646-PA 723 GI21646-PA 370..720 172..544 208 20.6 Plus
Dmoj\GI20573-PA 411 GI20573-PA 106..409 181..496 207 23.9 Plus
Dmoj\GI21774-PA 358 GI21774-PA 77..276 333..551 170 25.3 Plus
Dmoj\GI21774-PA 358 GI21774-PA 144..328 174..372 167 24.4 Plus
Dmoj\GI21646-PA 723 GI21646-PA 445..689 337..552 160 24.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 23:58:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21851-PA 2346 GL21851-PA 1..2346 1..2232 8175 76.1 Plus
Dper\GL12727-PA 1406 GL12727-PA 1065..1382 171..535 238 23.4 Plus
Dper\GL13421-PA 560 GL13421-PA 272..557 227..544 224 23.8 Plus
Dper\GL13093-PA 356 GL13093-PA 65..352 181..495 221 24.8 Plus
Dper\GL18875-PA 694 GL18875-PA 330..691 158..544 220 21.3 Plus
Dper\GL13093-PA 356 GL13093-PA 62..322 220..515 214 23.8 Plus
Dper\GL13093-PA 356 GL13093-PA 75..274 333..551 169 25.8 Plus
Dper\GL13093-PA 356 GL13093-PA 142..326 174..372 165 24.4 Plus
Dper\GL18875-PA 694 GL18875-PA 416..660 337..552 165 24.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:58:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16032-PA 2344 GA16032-PA 1..2344 1..2232 8195 76.1 Plus
Dpse\GA13429-PA 1406 GA13429-PA 1065..1382 171..535 246 24.3 Plus
Dpse\GA14510-PA 356 GA14510-PA 65..352 181..495 221 24.8 Plus
Dpse\GA17928-PA 694 GA17928-PA 330..691 158..544 220 21.3 Plus
Dpse\GA14510-PA 356 GA14510-PA 62..322 220..515 214 23.8 Plus
Dpse\GA21079-PA 411 GA21079-PA 106..409 181..496 212 24.2 Plus
Dpse\GA14510-PA 356 GA14510-PA 75..274 333..551 169 25.8 Plus
Dpse\GA14510-PA 356 GA14510-PA 142..326 174..372 165 24.4 Plus
Dpse\GA17928-PA 694 GA17928-PA 416..660 337..552 165 24.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26587-PA 2157 GM26587-PA 1..2157 1..2232 11178 94.9 Plus
Dsec\GM13994-PA 1325 GM13994-PA 984..1301 171..535 253 24.8 Plus
Dsec\GM19230-PA 361 GM19230-PA 70..357 181..495 224 25.2 Plus
Dsec\GM16739-PA 700 GM16739-PA 332..697 164..544 224 21.7 Plus
Dsec\GM19230-PA 361 GM19230-PA 67..327 220..515 215 23.8 Plus
Dsec\GM12236-PA 446 GM12236-PA 158..445 181..495 209 25.8 Plus
Dsec\GM12236-PA 446 GM12236-PA 239..445 176..396 186 26 Plus
Dsec\GM12236-PA 446 GM12236-PA 117..433 182..530 179 23.4 Plus
Dsec\GM19230-PA 361 GM19230-PA 80..279 333..551 169 25.3 Plus
Dsec\GM19230-PA 361 GM19230-PA 147..331 174..372 166 24.4 Plus
Dsec\GM16739-PA 700 GM16739-PA 422..666 337..552 163 24.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 23:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21089-PA 1474 GD21089-PA 1..978 1..968 4679 93.5 Plus
Dsim\GD21089-PA 1474 GD21089-PA 911..1474 1673..2232 2021 96.3 Plus
Dsim\GD13273-PA 1328 GD13273-PA 987..1304 171..535 253 24.8 Plus
Dsim\GD23022-PA 700 GD23022-PA 332..697 164..544 225 21.7 Plus
Dsim\GD16610-PA 361 GD16610-PA 70..357 181..495 224 25.2 Plus
Dsim\GD16610-PA 361 GD16610-PA 67..327 220..515 215 23.8 Plus
Dsim\GD17720-PA 446 GD17720-PA 158..445 181..495 211 25.8 Plus
Dsim\GD17720-PA 446 GD17720-PA 239..445 176..396 188 26 Plus
Dsim\GD17720-PA 446 GD17720-PA 117..433 182..530 180 23.2 Plus
Dsim\GD16610-PA 361 GD16610-PA 80..279 333..551 169 25.3 Plus
Dsim\GD16610-PA 361 GD16610-PA 147..331 174..372 166 24.4 Plus
Dsim\GD23022-PA 700 GD23022-PA 422..666 337..552 163 24.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 23:58:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23804-PA 2214 GJ23804-PA 1..2214 1..2232 7742 74 Plus
Dvir\GJ12563-PA 1354 GJ12563-PA 1013..1330 171..535 260 24.8 Plus
Dvir\GJ16947-PA 358 GJ16947-PA 67..354 181..495 228 25.2 Plus
Dvir\GJ16947-PA 358 GJ16947-PA 64..324 220..515 218 23.8 Plus
Dvir\GJ17774-PA 709 GJ17774-PA 356..706 172..544 214 21.3 Plus
Dvir\GJ21422-PA 411 GJ21422-PA 106..409 181..496 208 23.6 Plus
Dvir\GJ16947-PA 358 GJ16947-PA 77..276 333..551 171 25.3 Plus
Dvir\GJ16947-PA 358 GJ16947-PA 144..328 174..372 168 24.4 Plus
Dvir\GJ17774-PA 709 GJ17774-PA 431..675 337..552 164 25.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 23:58:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13309-PA 2284 GK13309-PA 1..2284 1..2232 7757 74.7 Plus
Dwil\GK10570-PA 1242 GK10570-PA 900..1218 170..535 250 24.7 Plus
Dwil\GK19997-PA 358 GK19997-PA 67..354 181..495 227 25.2 Plus
Dwil\GK19997-PA 358 GK19997-PA 64..324 220..515 217 23.8 Plus
Dwil\GK24403-PA 766 GK24403-PA 413..763 172..544 215 21.8 Plus
Dwil\GK19416-PA 346 GK19416-PA 46..338 217..537 202 23.5 Plus
Dwil\GK19997-PA 358 GK19997-PA 77..276 333..551 170 25.3 Plus
Dwil\GK19997-PA 358 GK19997-PA 144..328 174..372 168 24.4 Plus
Dwil\GK24403-PA 766 GK24403-PA 488..732 337..552 164 25.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23471-PA 2226 GE23471-PA 1..2226 1..2232 11518 96.7 Plus
Dyak\GE20631-PA 1327 GE20631-PA 986..1303 171..535 255 24.8 Plus
Dyak\GE16263-PA 361 GE16263-PA 70..357 181..495 228 25.2 Plus
Dyak\GE16791-PA 700 GE16791-PA 332..697 164..544 226 21.7 Plus
Dyak\GE16263-PA 361 GE16263-PA 67..327 220..515 218 23.8 Plus
Dyak\GE10447-PA 467 GE10447-PA 183..466 181..495 211 25.2 Plus
Dyak\GE10447-PA 467 GE10447-PA 260..466 176..396 179 26 Plus
Dyak\GE16263-PA 361 GE16263-PA 80..279 333..551 171 25.3 Plus
Dyak\GE16263-PA 361 GE16263-PA 147..331 174..372 168 24.4 Plus
Dyak\GE16791-PA 700 GE16791-PA 422..666 337..552 165 24.8 Plus
Dyak\GE10447-PA 467 GE10447-PA 95..454 158..530 159 21.6 Plus

LD40380.hyp Sequence

Translation from 96 to 6794

> LD40380.hyp
METRQPSSGDDLKPELYFLISKFLAAGPLEETAKVLIRELEEKKVLPRRL
DWQGNEHEQTFEELERKYKHIGANHLLEICSRLGPLVDRELPPSVPGINS
LLGTGRQNLLRTKETVYCHRSLRDYCTRLNGVSLPDSVLTKPTHNLDRVL
TGREHGGEVRRKLLVPTDLYRRTKLLRRTVGHLSSVYCVLFDRTGRYIIT
GADDLLIKIWSAADGRLLATLRGASSEITDIAINLDNTMLAAGSLDHILR
VWDMQTTSPIAVLSAHTGMITSVNFCPSPRSDLKYLVTTSTDGSIAFWQY
STPRGQKITFAPKPTQYHEKLRPGQAQMMCTTFSPGGIFLAAGSADHHVR
VYMMGEDGPKRILETEAYTDAVDSVQWSHRGLRFISGSKDGTAHIWTFES
QQWKSSKLCMTERLASCPEPEEGKRLKVTMVAWDASDRYVITAVNDFTIK
IWDSKSAKLHRVLRGHKDELYVLESNPRDEHVLLSAGHDGQVFLWDIEQG
VCVANFLNDIDGQGHGSVFDAKWSPDGTMIAATDSHGHILIFGLGVCIEK
YKMLPTELFFHTDFRPLLRDAQHHVVDEQTQIMPHLMPPPFLVDADGNPH
PSRFQRFVPGRESCSLDQLIPNLTVGVDGVVIDDGGAGGDAVVAAAPAEA
PPAALPPAAAGGPQGANYSHIDRMIAALANRQSVNVNANDANPTNGNQSF
ERLTNRQMPDSNGRQSSRGNVLGSRLSTPRQGWGAAAAAPVEDQAGPSQP
PAEPAAEPGQAQVQQALPLKFIRRTYVRPMKYPQLQNLKQTIYSAGQFEK
QEYKREMRRRPIMINTASAASSQQPGSVGRPRNTRGNGGGARAGRRRGPQ
PAGGQPQPAYRTRAVRDQEPEHYDEVAPPPEEEEEDVSSNSSGDTSYSNV
EENLEDSSDESETDSSDYSDWVADTPGPNLEPPKRSKRKPLSRRPRSSDD
SSDDERAGRSRGGQVTARKVGRKTVLFPPTDANGEIPELYRPAEWLSEVI
PRKAPYYPQMGDEVVYFRQGHAKYLDAVRLKKVYKLSHSSEPWNFHTLRD
HELVRVIGIKYEIRPPRLCCLKLAIIDEEGNMTGTTFKIKYHDMPDVLDF
LVLRQTFDLAVQRNWSIGDRFRCMIVDGWWMGQIESRHALSADFPDSSFM
CFRVRWDNGEYEFMSPWDMEPIDQQRVPDEVGGAVPVLPEEIRATLYQPK
SEEWHRGDRDGTCRRIINGLEQVMRLSIAEHFLAPVDLNIYPDYAYLIEY
PIDLTTIKSRFENHFYRRITSAQFDVRYLATNAEQYNRRHAIIVKHSRIV
TDLCLRIIREPDEIDVAAVYHQLADVYHSSESENEVDSDVVPSTSTGPTT
SAAAAAARQRVSSARRSTRIHSEGDWRADCRQLLDLMWARTDSAPFREPV
DTIDFPDYLEIIATPMDLRTVKEDLLGGNYDDPLDFAKDVRLIFQNSKNY
NTNKRSRIYAMTLRLSALFESHIKTVVTSWKAALRRANKNKSGSSGGGRG
GSSSSPNKRVKKERSTRRNQKPTAAARRLPVANSSEDEDEEDDDDDDDDD
DEEEASTRGRSRRRNGVAVSASSSGSNRVTSSSAAQQRRGKSSSSEEEEE
EETSAQATSDASSDEEERAQSNDSSPQQTRTRRARQRQRLSDDSNINDSE
DSYNPNEGRGSRRRPGAARPSSNRQTNGHSSKRRRLNKSPANAAPGPSLP
RRTRRIAGSSAEEAASHSQHDESTQDSQIGRRKGRSASSRSIGNGPSTSA
AAAANSSLESPSRNTRANGTRTSSHLGAENDHSYHLPVRNGRIIESDTDS
PVIRPTRQSAKRALMDWGRGSDIEEEEEEEEEDSEEAEEILPTPTKDDLP
STSRAALAQAAAGPSRQLRTNRNTVVRPAQSDDDDDDDSDNEPLANNQQK
NYQSPAKSSSTATVAPHPLSLRRRLASPPERNTHMTRSHATSTTSSAAAS
RAEQQPAVSTHDHNYLGNVNSSRAPRRILSRHQRNADELDTSLDVLENSR
LLSAIANHRRPTSTTNSNSASNVVTRRLRGRASQANSHDEDHEEEEAAAS
DEGTDGGSSSQSYEDEDEDSDSEDNQPLTSYVSPSNGRPRRKAKTSSSSA
TTQERPLRRTRRPPSNNSIANDNDDDDDYVVPRSRRANRGGNQRAGRNQK
RPRYNEQSEEEEAAAGYSHRSKRIRNGDAHASSQERSQASTERDQEEEED
GTSVDSEEQQVNVSSRGRVRKPSAKARGIFKE*

LD40380.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:56:16
Subject Length Description Subject Range Query Range Score Percent Strand
BRWD3-PA 2232 CG31132-PA 1..2232 1..2232 11626 100 Plus
Muc68D-PB 1514 CG6004-PB 306..1057 1502..2224 291 19.3 Plus
Muc68D-PB 1514 CG6004-PB 271..957 1553..2224 277 19.6 Plus
Muc68D-PB 1514 CG6004-PB 273..1027 1502..2226 261 19.2 Plus
Muc68D-PB 1514 CG6004-PB 561..1210 1490..2126 242 19.3 Plus
Muc68D-PB 1514 CG6004-PB 455..1220 1502..2219 238 19.3 Plus
wds-PB 361 CG17437-PB 70..357 181..495 233 24.5 Plus
wds-PA 361 CG17437-PA 70..357 181..495 233 24.5 Plus
ago-PA 1326 CG15010-PA 985..1302 171..535 230 24.5 Plus
wds-PB 361 CG17437-PB 67..316 220..498 225 23.8 Plus
wds-PA 361 CG17437-PA 67..316 220..498 225 23.8 Plus
Muc68D-PB 1514 CG6004-PB 777..1313 1502..2044 201 19.7 Plus
wds-PB 361 CG17437-PB 80..279 333..551 175 25.3 Plus
wds-PB 361 CG17437-PB 147..331 174..372 175 23.9 Plus
wds-PA 361 CG17437-PA 80..279 333..551 175 25.3 Plus
wds-PA 361 CG17437-PA 147..331 174..372 175 23.9 Plus