Clone LD40412 Report

Search the DGRC for LD40412

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:404
Well:12
Vector:pOT2
Associated Gene/TranscriptCap-D2-RA
Protein status:LD40412.pep: gold
Preliminary Size:4150
Sequenced Size:4296

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1911 2001-01-01 Release 2 assignment
CG1911 2002-06-12 Blastp of sequenced clone
CG1911 2003-01-01 Sim4 clustering to Release 3
CAP-D2 2008-04-29 Release 5.5 accounting
CAP-D2 2008-08-15 Release 5.9 accounting
CAP-D2 2008-12-18 5.12 accounting

Clone Sequence Records

LD40412.complete Sequence

4296 bp (4296 high quality bases) assembled on 2002-06-12

GenBank Submission: AY122183

> LD40412.complete
CTCAATTCAGAAGATACAATTATTATTTCGCGGTAAATAGGAGTAATAAC
CGCCATGGAGGAATCGCACGACTTCCAGTTCGTCCTTCCCCTGAATGCAT
CTGATCTGATCAACTCCAGCGGAGATCAGTATTACGTGAAGGAGATTTTT
GGCGCCCAGGAGATTCCCGCGAAACTACAAGAATGCAAGCGCAAAGTGCA
CTTGGGCGATCCTTTTTATATATTCGAGCACTTCGACTTGTATTACTCGA
TCATCGAGGCCCGCGGTTCAGATGGCGCCTCTGCACAGAATCTAATGAGG
TCCTTTGACCTGCTCTACCTGACCGTGGAGAAACTGTTCCAAGACTTGCA
GCCCCTGCTGACGGCCAGTGAGCCCATGTCTAACCAGCAGCGCAATAGTT
ACCTCAACCTGACCAAAATGACGCTGTTCCTCCAGGTGAGCACCGTCAAG
AAGATCAACAACAGTGTCCAGCAGGCCATGCGGGATCAGCAGCTCAATGT
TCAGAAGAAGCGTGCCAAGCCATCGGAGGGATTGGAGCAGTTTCCCAACT
GGGAGGTTAAGCGCGGCAAGTTCTTGGTGCAGCTCTTCAACGTGCTGCAG
TGCCCGCTGGAGAAGCTCTGGAGTCCGCCCGTAGCCGAGGAGGACTTTAT
AAATTTGCTCTGCGACCCCTGCTATCGAACAATCGAACTTTTGCCGCTTC
GCATGGACAACAAACACGTATTCGACACGATCTTCCAGATCTTGGGCACA
TCGATCAAGCGCTTTAACCAGGCCATGACCTTCCCGGTGCGCATTCTGCA
GATCCTACGCGGTACCGAGCATGCAGCCCATTCAGTAGCAGCTGGAATTT
TGCTTCTGCACGAGGAGTACGGAATTTCTTCGGTCTTCTCCATTCTAATC
AAGAGCATTGTGGATGCTCTAAGGATGGACAGTTCTGACTCTTCGGTGTC
CAAACACTTCTCCAATTTCCTGGCCGAGTTCTCGAACATAGCACCTTCGC
TGATCGTACCGCACCTGGAAAAGCTGGCGGAAGATTTACTAGATTGTCAG
TCTCACACGCTGCGAAATTGTGTGCTCCAGATCATCGGCGACACCGTGGT
TAGCGAACTGACCTCGGAGGATCTTAGCGAAGAACTGAAGGAAGTACGCA
ATGAGTTCCTCGAGCACCTAATGGCCCACATCCTAGACATTTCTGCACAC
GTGCGCTCCAAGGTGCTCAGTATCTGGCATCACCTGAAAACCCAGCACGC
CATTCCGCTTAACTTCCTGACCAGAGTGCTGGAGGAAGCCATCGGAAGGT
TGGAAGACAAGAGCTCGCTGGTGCGGCGTGCCGCCATGCATCTGATCAAA
TCCGCCCTGGAAAGCAATCCATACAGCAGTAAGCTTTCCATAGATGAACT
CCGTGCCAAGCATGAACACGAGGTGCAGGCAATGGAGAAACTTAATGAGG
TACTCGAGGAAGAGCGCAAGCAGGAGGAGAAGCTCAACGACGAGTTTAGC
AGCTTGGCGCCCGAACTGCTGCCTTTCATAGAGGAGAACCTTACGGAGTT
TCCCGATATGCAGTTCGACAAGGAGGAGAGCGACGAGACCTTGATGGAGC
GGATCATTCCGCTGATGCGCGAAAAGAACTACAAGGATGTTATTGTTCTA
GTGCGAAAGGTAGACTTTTTGGCGGGAAATCAGAATATGAGTTCCTTACT
GAAGCACGAGGAGCATTGCGTGTATGTGCTGGCCTTGCTAAAGACATATC
ACCTGCTGGCTGCTGGATTTAAACAGAGCAGCGAGGAAATGCTGCAGCAA
ATCAAAACGGTGCAGTTCCTAAAAGACAGCATTGACTTTGCCGTCTTGAT
GACTTCAGCCTTCCCCAAACTGCACGAGATGCTCATGTCCAAGACAAACA
CGGATGTTTTTGAGGCGGTGGACTTGTTCACCACCGGGTACATGTTCGGA
ATTCACGGCACGGAGTCGGGAATGCAGAGAATGCTGCAACTGGTCTGGTC
TTCGGACAAGGAGAAACGAGATGCAGTGTCGGATGCCTACAAGCGCGTTC
TGTTCTCCACGGACCAAACGGGTCGCGCTCATGCCATTAAGGTGGTGCAG
AACCTGTCGAAGTTTCTTTCGGAAATCGAGTATGGTCACTACACGGCCTT
GGAGTCGCTGATGACCGAGTGGGTGTTGGGTGGCGACATCGATGCTGCTG
TCATCCAGGTGCTCTTTGAGCGCTTCACGCTAAAACTGGAGGGCACTACA
TCCAACGAATCTCGCCTGTCGCTCCAGCTCCTGATAATGGCCTCGCAATC
GAAGTCTAGTATTGTTTCGGCCAACACTGCCATCATCGAGGATATCGCCG
TCGGAGAGCGGGTGCGTCGGGATCCACGGATATTTACCTCCTGTCTGCAG
CTGCTGGTCAACTCAATCGATGCAAACAACACTGCCAAGTATTATAAGCG
TCAGAACAGCGATGCAGAATTCGTGGGAAAGATCACGCGGCTCTTCCTCG
ACTTCTTTTTCCACAGAAGTCTATACGACTTCGACGCACTGGCCATGAGT
GTTTTTGAATACTTCTATAGGATGTGCCAGGCGCCGGATGTGATTGCGCA
GCAACTGGTGACGGCTTTACTCAAGCAATTCAATGAGAGCTGGCTGGTCA
AGGAAGCGGCTGCAATAGTTCCCTCTCCAGACAAAGCGGATACGGAAACT
GTTCCGGACTCGCAGCCCTTGGAGATTCCGCATTCGCAGACCCTTACTCC
CACTCAGACTCAAGCTGATAGCCAATCGCAGATGCAAGGCACCTTGATTC
CCGTGTATCTCGTCTCCCGCTTAATCTTTTGCATCGGCTACATGACCATC
AAGGAGATGATCTTTCTCGACATGGATATCTATAATAACATGAAGTATCG
CGACGAGCTGACGGCTCTTGAAGAGCGTAAAAACCGCAATCAGCAGGCGG
GAAGTTCACATAATGCGGCCAGACTTACGCTTAATATGTCAGCGATGGAG
GTGCGCAAGAGGCTGTCCGGAGTGGCAGCGGAACCACAGCAGGAGCCAGA
CGACGATCTGGTGGGAGCGACTGCAGAGGACAACATCGCCGAGGAAATCC
ACGGCATCTGCGAGGACATGCTGCTTTACAACCCGGATGCTCTGCTCTCC
AAGCTGGCGCCATTTATCATAGAGATTTGCAAGCGTCCAGGTGAGTTTGG
TGATCCCACGTTGCAACAGGCCGCTACTTTGGCTCTGGCCCGGCTCATGA
CCGTCTCCTCCCGTTTCTGCGAGTCCAACATGAGCTTTTTGATGAACATC
CTCAACCTAACGAAGAACATTCGAATCAAGTGCAACACGGTGGTGGGGCT
GTCGGATCTCACTTTCCGTTTCCCAAACATCATCGAGCCGTGGACGGGGC
ACTTCTACGCTCAGCTGCACGAATCGAACACCGAGTTAAGGCTAACTGCC
GTCAAAATGCTATCTCATCTGATCCTCAACGAGATGATACGCGTCAAGGG
TCAAATCGCCGACATGGCACTTTGCATTGTGGACGGCAACGAGGAGATTC
GCAATATCACCAAGCAGTTCTTCAAGGAGATAGCCAACAAGTCGAACATT
CTGTACAACGTCCTGCCAGATATCATCTCCCGTTTGGGGGACATAAACCT
CAACCTGGATGAGGACAAGTACCGCATTATCATGTCCTATATCCTGGGTC
TCATCCAGAAGGATCGCCAGATTGAGACGCTAGTGGAGAAGCTGTGTCTG
CGCTTCCCGGTAACGCGGGTGGAGCGTCAATGGCGCGACATCGCCTACTG
CCTCGGCCTGCTCACCTACAACGAGCGAGCTGTGAAGAAGCTAATGGACA
ATATGCAGCACTACAGGGACAAGGTCCAGGTGGACGAGGTTTATCAGTCC
TTCAAGCTCATCATTAGCAACACCAACAAGTTGGCCAAGCCGGAGCTCAA
AGCTGTAGTCACCGAGTTCGAGAACCGACTGAACGAGTGCCTGCAAGTCA
ACCCGGATACCGCTGCCCAGGGTGATCAAGAAAGCACTCCAGAAGGTCAG
GGCAACAGAACCAGAGCGGCGCCAAGGACAAAGAAGGGTGGTCGCAAGCC
GGCGGCCAACAGGAACAATACTGTGCGAGGACGCGGAAGACGTGCTCGCC
GGGATTCCACCTCAGAAGAGAGCTTCAGTTCCAGCAGCAGCGACTAGTTC
GTGCTCCATCTTAAGTTACGATCTGAGCGGGTTTTTAATGATGTACAAAG
ATGGTTTTTAATAAAATAGTTAATAGAAAAAAAAAAAAAAAAAAAA

LD40412.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:48:05
Subject Length Description Subject Range Query Range Score Percent Strand
CAP-D2-RA 4314 CAP-D2-RA 33..4310 1..4278 21390 100 Plus
CAP-D2.b 4317 CAP-D2.b 215..4313 180..4278 20495 100 Plus
CAP-D2.a 4028 CAP-D2.a 180..4024 434..4278 19225 100 Plus
CAP-D2.b 4317 CAP-D2.b 1..181 1..181 905 100 Plus
CAP-D2.a 4028 CAP-D2.a 1..181 1..181 905 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:32:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 25500379..25502875 1780..4276 12125 99 Plus
chr3R 27901430 chr3R 25499084..25499979 654..1549 4435 99.7 Plus
chr3R 27901430 chr3R 25498550..25499023 180..653 2370 100 Plus
chr3R 27901430 chr3R 25498294..25498474 1..181 890 99.4 Plus
chr3R 27901430 chr3R 25500040..25500181 1550..1691 710 100 Plus
chr3R 27901430 chr3R 25500235..25500324 1690..1779 450 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:35:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:32:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29677761..29680259 1780..4278 12495 100 Plus
3R 32079331 3R 29676466..29677361 654..1549 4480 100 Plus
3R 32079331 3R 29675932..29676405 180..653 2370 100 Plus
3R 32079331 3R 29675676..29675856 1..181 905 100 Plus
3R 32079331 3R 29677422..29677563 1550..1691 710 100 Plus
3R 32079331 3R 29677617..29677706 1690..1779 450 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:20:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 29418592..29421090 1780..4278 12495 100 Plus
3R 31820162 3R 29417297..29418192 654..1549 4480 100 Plus
3R 31820162 3R 29416763..29417236 180..653 2370 100 Plus
3R 31820162 3R 29416507..29416687 1..181 905 100 Plus
3R 31820162 3R 29418253..29418394 1550..1691 710 100 Plus
3R 31820162 3R 29418448..29418537 1690..1779 450 100 Plus
Blast to na_te.dros performed 2019-03-15 18:32:12
Subject Length Description Subject Range Query Range Score Percent Strand
rover 7318 rover ROVER 7318bp 6221..6276 3640..3694 124 71.4 Plus

LD40412.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:33:10 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 25498294..25498474 1..181 99 -> Plus
chr3R 25498552..25499023 182..653 100 -> Plus
chr3R 25499084..25499979 654..1549 99 -> Plus
chr3R 25500040..25500181 1550..1691 100 -> Plus
chr3R 25500237..25500324 1692..1779 100 -> Plus
chr3R 25500379..25502875 1780..4276 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:22:46 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
CAP-D2-RA 1..4143 55..4197 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:23:10 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
CAP-D2-RA 1..4143 55..4197 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:07:22 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
Cap-D2-RA 1..4143 55..4197 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:13:54 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
CAP-D2-RA 1..4143 55..4197 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:06:08 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
Cap-D2-RA 1..4143 55..4197 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:50:10 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
CAP-D2-RA 1..4276 1..4276 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:23:10 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
CAP-D2-RA 1..4276 1..4276 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:07:22 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
Cap-D2-RA 26..4301 1..4276 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:13:54 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
CAP-D2-RA 1..4276 1..4276 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:06:08 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
Cap-D2-RA 26..4301 1..4276 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:33:10 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29675676..29675856 1..181 100 -> Plus
3R 29675934..29676405 182..653 100 -> Plus
3R 29676466..29677361 654..1549 100 -> Plus
3R 29677422..29677563 1550..1691 100 -> Plus
3R 29677619..29677706 1692..1779 100 -> Plus
3R 29677761..29680257 1780..4276 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:33:10 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29675676..29675856 1..181 100 -> Plus
3R 29675934..29676405 182..653 100 -> Plus
3R 29676466..29677361 654..1549 100 -> Plus
3R 29677422..29677563 1550..1691 100 -> Plus
3R 29677619..29677706 1692..1779 100 -> Plus
3R 29677761..29680257 1780..4276 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:33:10 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29675676..29675856 1..181 100 -> Plus
3R 29675934..29676405 182..653 100 -> Plus
3R 29676466..29677361 654..1549 100 -> Plus
3R 29677422..29677563 1550..1691 100 -> Plus
3R 29677619..29677706 1692..1779 100 -> Plus
3R 29677761..29680257 1780..4276 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:07:22 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25501398..25501578 1..181 100 -> Plus
arm_3R 25501656..25502127 182..653 100 -> Plus
arm_3R 25502188..25503083 654..1549 100 -> Plus
arm_3R 25503144..25503285 1550..1691 100 -> Plus
arm_3R 25503341..25503428 1692..1779 100 -> Plus
arm_3R 25503483..25505979 1780..4276 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:46:45 Download gff for LD40412.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29416765..29417236 182..653 100 -> Plus
3R 29417297..29418192 654..1549 100 -> Plus
3R 29418253..29418394 1550..1691 100 -> Plus
3R 29418450..29418537 1692..1779 100 -> Plus
3R 29418592..29421088 1780..4276 100   Plus
3R 29416507..29416687 1..181 100 -> Plus

LD40412.pep Sequence

Translation from 54 to 4196

> LD40412.pep
MEESHDFQFVLPLNASDLINSSGDQYYVKEIFGAQEIPAKLQECKRKVHL
GDPFYIFEHFDLYYSIIEARGSDGASAQNLMRSFDLLYLTVEKLFQDLQP
LLTASEPMSNQQRNSYLNLTKMTLFLQVSTVKKINNSVQQAMRDQQLNVQ
KKRAKPSEGLEQFPNWEVKRGKFLVQLFNVLQCPLEKLWSPPVAEEDFIN
LLCDPCYRTIELLPLRMDNKHVFDTIFQILGTSIKRFNQAMTFPVRILQI
LRGTEHAAHSVAAGILLLHEEYGISSVFSILIKSIVDALRMDSSDSSVSK
HFSNFLAEFSNIAPSLIVPHLEKLAEDLLDCQSHTLRNCVLQIIGDTVVS
ELTSEDLSEELKEVRNEFLEHLMAHILDISAHVRSKVLSIWHHLKTQHAI
PLNFLTRVLEEAIGRLEDKSSLVRRAAMHLIKSALESNPYSSKLSIDELR
AKHEHEVQAMEKLNEVLEEERKQEEKLNDEFSSLAPELLPFIEENLTEFP
DMQFDKEESDETLMERIIPLMREKNYKDVIVLVRKVDFLAGNQNMSSLLK
HEEHCVYVLALLKTYHLLAAGFKQSSEEMLQQIKTVQFLKDSIDFAVLMT
SAFPKLHEMLMSKTNTDVFEAVDLFTTGYMFGIHGTESGMQRMLQLVWSS
DKEKRDAVSDAYKRVLFSTDQTGRAHAIKVVQNLSKFLSEIEYGHYTALE
SLMTEWVLGGDIDAAVIQVLFERFTLKLEGTTSNESRLSLQLLIMASQSK
SSIVSANTAIIEDIAVGERVRRDPRIFTSCLQLLVNSIDANNTAKYYKRQ
NSDAEFVGKITRLFLDFFFHRSLYDFDALAMSVFEYFYRMCQAPDVIAQQ
LVTALLKQFNESWLVKEAAAIVPSPDKADTETVPDSQPLEIPHSQTLTPT
QTQADSQSQMQGTLIPVYLVSRLIFCIGYMTIKEMIFLDMDIYNNMKYRD
ELTALEERKNRNQQAGSSHNAARLTLNMSAMEVRKRLSGVAAEPQQEPDD
DLVGATAEDNIAEEIHGICEDMLLYNPDALLSKLAPFIIEICKRPGEFGD
PTLQQAATLALARLMTVSSRFCESNMSFLMNILNLTKNIRIKCNTVVGLS
DLTFRFPNIIEPWTGHFYAQLHESNTELRLTAVKMLSHLILNEMIRVKGQ
IADMALCIVDGNEEIRNITKQFFKEIANKSNILYNVLPDIISRLGDINLN
LDEDKYRIIMSYILGLIQKDRQIETLVEKLCLRFPVTRVERQWRDIAYCL
GLLTYNERAVKKLMDNMQHYRDKVQVDEVYQSFKLIISNTNKLAKPELKA
VVTEFENRLNECLQVNPDTAAQGDQESTPEGQGNRTRAAPRTKKGGRKPA
ANRNNTVRGRGRRARRDSTSEESFSSSSSD*

LD40412.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:18:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22385-PA 1383 GF22385-PA 1..1382 1..1378 5780 78 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:18:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11678-PA 1380 GG11678-PA 1..1351 1..1350 6898 94.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20737-PA 1426 GH20737-PA 1..1358 1..1363 5098 69.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:25
Subject Length Description Subject Range Query Range Score Percent Strand
Cap-D2-PA 1380 CG1911-PA 1..1380 1..1380 7009 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:18:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20820-PA 1426 GI20820-PA 1..1351 1..1365 5083 68.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19448-PA 1392 GL19448-PA 1..1357 1..1350 5123 70.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25963-PA 1389 GA25963-PA 1..1357 1..1350 5107 69.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12803-PA 1380 GM12803-PA 1..1380 1..1380 7292 98 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:18:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21449-PA 1380 GD21449-PA 1..1380 1..1380 7275 98 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:18:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20553-PA 1421 GJ20553-PA 1..1354 1..1365 5267 72 Plus
Dvir\GJ16353-PA 126 GJ16353-PA 1..125 1..125 430 63.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:18:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22013-PA 1416 GK22013-PA 1..1361 1..1364 5140 69.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:18:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23867-PA 1381 GE23867-PA 1..1357 1..1356 6956 94.9 Plus

LD40412.hyp Sequence

Translation from 54 to 4196

> LD40412.hyp
MEESHDFQFVLPLNASDLINSSGDQYYVKEIFGAQEIPAKLQECKRKVHL
GDPFYIFEHFDLYYSIIEARGSDGASAQNLMRSFDLLYLTVEKLFQDLQP
LLTASEPMSNQQRNSYLNLTKMTLFLQVSTVKKINNSVQQAMRDQQLNVQ
KKRAKPSEGLEQFPNWEVKRGKFLVQLFNVLQCPLEKLWSPPVAEEDFIN
LLCDPCYRTIELLPLRMDNKHVFDTIFQILGTSIKRFNQAMTFPVRILQI
LRGTEHAAHSVAAGILLLHEEYGISSVFSILIKSIVDALRMDSSDSSVSK
HFSNFLAEFSNIAPSLIVPHLEKLAEDLLDCQSHTLRNCVLQIIGDTVVS
ELTSEDLSEELKEVRNEFLEHLMAHILDISAHVRSKVLSIWHHLKTQHAI
PLNFLTRVLEEAIGRLEDKSSLVRRAAMHLIKSALESNPYSSKLSIDELR
AKHEHEVQAMEKLNEVLEEERKQEEKLNDEFSSLAPELLPFIEENLTEFP
DMQFDKEESDETLMERIIPLMREKNYKDVIVLVRKVDFLAGNQNMSSLLK
HEEHCVYVLALLKTYHLLAAGFKQSSEEMLQQIKTVQFLKDSIDFAVLMT
SAFPKLHEMLMSKTNTDVFEAVDLFTTGYMFGIHGTESGMQRMLQLVWSS
DKEKRDAVSDAYKRVLFSTDQTGRAHAIKVVQNLSKFLSEIEYGHYTALE
SLMTEWVLGGDIDAAVIQVLFERFTLKLEGTTSNESRLSLQLLIMASQSK
SSIVSANTAIIEDIAVGERVRRDPRIFTSCLQLLVNSIDANNTAKYYKRQ
NSDAEFVGKITRLFLDFFFHRSLYDFDALAMSVFEYFYRMCQAPDVIAQQ
LVTALLKQFNESWLVKEAAAIVPSPDKADTETVPDSQPLEIPHSQTLTPT
QTQADSQSQMQGTLIPVYLVSRLIFCIGYMTIKEMIFLDMDIYNNMKYRD
ELTALEERKNRNQQAGSSHNAARLTLNMSAMEVRKRLSGVAAEPQQEPDD
DLVGATAEDNIAEEIHGICEDMLLYNPDALLSKLAPFIIEICKRPGEFGD
PTLQQAATLALARLMTVSSRFCESNMSFLMNILNLTKNIRIKCNTVVGLS
DLTFRFPNIIEPWTGHFYAQLHESNTELRLTAVKMLSHLILNEMIRVKGQ
IADMALCIVDGNEEIRNITKQFFKEIANKSNILYNVLPDIISRLGDINLN
LDEDKYRIIMSYILGLIQKDRQIETLVEKLCLRFPVTRVERQWRDIAYCL
GLLTYNERAVKKLMDNMQHYRDKVQVDEVYQSFKLIISNTNKLAKPELKA
VVTEFENRLNECLQVNPDTAAQGDQESTPEGQGNRTRAAPRTKKGGRKPA
ANRNNTVRGRGRRARRDSTSEESFSSSSSD*

LD40412.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:20:55
Subject Length Description Subject Range Query Range Score Percent Strand
Cap-D2-PA 1380 CG1911-PA 1..1380 1..1380 7009 100 Plus