BDGP Sequence Production Resources |
Search the DGRC for LD40415
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 404 |
Well: | 15 |
Vector: | pOT2 |
Associated Gene/Transcript | CG14005-RA |
Protein status: | LD40415.pep: gold |
Preliminary Size: | 1516 |
Sequenced Size: | 1389 |
Gene | Date | Evidence |
---|---|---|
CG14005 | 2001-01-01 | Release 2 assignment |
CG14005 | 2001-11-29 | Blastp of sequenced clone |
CG14005 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14005 | 2008-04-29 | Release 5.5 accounting |
CG14005 | 2008-08-15 | Release 5.9 accounting |
CG14005 | 2008-12-18 | 5.12 accounting |
1389 bp (1389 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069636
> LD40415.complete CCTTGGTCACGTACGAAAATGTTTGGATTATAACGATTCCACAAAATTGA AATTAGACCGGAATATGAGCGGCCAGAAGCACCTGCGATTGCGCTACTAC ACGTCGCTGGAGGAGGCCATGCTACTGCGGCTGTGGCGCGAGCACCTGCA TGCCATACCCTCCTACACGGACAACCTGCCCATTTTCCGGGAAATCGCGC ACGGCCTGCAGCAGAACGGAGTTCGGCTCAATAAGCAGGAGGCTCGCCGG CGCATCAACAGCTACCGCAACAAGTATTTGAACGATCGCAATCGCGTGGG GGGCAATGCGAACTTCGCGAAGGATTGGCGTCTCTACGCGCTGATCGATT GCCTCTTCTGTCCTGCCTGGCCGTCGTCCGCCCTCTTCCATTTCCGCAAT GTGCTGGAGACGATCCGTGCGACAGCACGTGTGGATTTGCCCGCCCTGCC GCCACTGCTATACACTTCGCCCGCCCAGCTAAAATTTGAGCGCGACTCAG AGGGATGCACCTTCCTCGATGCCCAGCCCCTAGTTCCCGCAGTAGTGAAG ACAGAGCCTCTGCCAGACGAACACCACCAGCTGGTGAATATTGAATACAA GCCCACAGTGACGCAGCTGGAAAACGCGGCTAGCCACTACCTGGAGAGAG CTACTGCCGAAAGTGTCATTCAGCGGTCGCCTCTCACGCCTGCCAACCAC ATCCTGCCCGAGGCAGAGGATGCGCCATATGGAGGCCACACCAACGGTGG CCAGACGGACGCCGAACGTTCGGCGAGCAAAAGGAGACGAGGGCGACGTA GTATACTGCCGCACTCGGGCAAGATCACAATGGCAATAGTGGAGGCGCTG CGCAAGGAGAACAGTTTGCTCGAGCAGCAGAACGACGCCTGTCTGCAGTC GCTCGTGCGCAAGGAGAAGCAGTTCCTGGACATGAAACATAACTTTCTGG CGTATATGGAGCGGCAGGAGGCAGTGCTGGCGTTAATAAAGCAAACGACC ATCAAGCTGGAACCATGATCCCGACTACTAGCACCACGTGGTAAGGACAT TGTATGACAGCTTTAGCTTTAAGTTGGGAATAGAGTCGCGGCGCTCGACC CTGTGTATGTTTTTCAATTCGTTCCTTTCTCAGACACAGATGTCTAATTC ACTCGACGTACAAAGCAGCAGCATAGCGAACCGAAGATATTATAATTTCT CAAACGTTCTTTTTCTAGCGTCATAAGTGTAATGTGTATGAACAATCGTC TGTGCAAAAGATCAATCTATACGGTCTTTAGTCTTAAATTAAAAACATTG TCTTGAGGCGAACTTGTATGGTAGCTACATTTTTAAAAAAAAAACTAAAA CTAAACAACTGGCTAAAAAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14005-RA | 1520 | CG14005-RA | 119..1492 | 1..1374 | 6870 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5799583..5800674 | 280..1371 | 99 | <- | Minus |
chr2L | 5800738..5801016 | 1..279 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14005-RA | 1..954 | 65..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14005-RA | 1..954 | 65..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14005-RA | 1..954 | 65..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14005-RA | 1..954 | 65..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14005-RA | 1..954 | 65..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14005-RA | 20..1390 | 1..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14005-RA | 20..1390 | 1..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14005-RA | 26..1396 | 1..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14005-RA | 20..1390 | 1..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14005-RA | 26..1396 | 1..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5800517..5801608 | 280..1371 | 100 | <- | Minus |
2L | 5801672..5801950 | 1..279 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5800517..5801608 | 280..1371 | 100 | <- | Minus |
2L | 5801672..5801950 | 1..279 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5800517..5801608 | 280..1371 | 100 | <- | Minus |
2L | 5801672..5801950 | 1..279 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5800517..5801608 | 280..1371 | 100 | <- | Minus |
arm_2L | 5801672..5801950 | 1..279 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5800517..5801608 | 280..1371 | 100 | <- | Minus |
2L | 5801672..5801950 | 1..279 | 100 | Minus |
Translation from 0 to 1017
> LD40415.hyp LGHVRKCLDYNDSTKLKLDRNMSGQKHLRLRYYTSLEEAMLLRLWREHLH AIPSYTDNLPIFREIAHGLQQNGVRLNKQEARRRINSYRNKYLNDRNRVG GNANFAKDWRLYALIDCLFCPAWPSSALFHFRNVLETIRATARVDLPALP PLLYTSPAQLKFERDSEGCTFLDAQPLVPAVVKTEPLPDEHHQLVNIEYK PTVTQLENAASHYLERATAESVIQRSPLTPANHILPEAEDAPYGGHTNGG QTDAERSASKRRRGRRSILPHSGKITMAIVEALRKENSLLEQQNDACLQS LVRKEKQFLDMKHNFLAYMERQEAVLALIKQTTIKLEP*
Translation from 64 to 1017
> LD40415.pep MSGQKHLRLRYYTSLEEAMLLRLWREHLHAIPSYTDNLPIFREIAHGLQQ NGVRLNKQEARRRINSYRNKYLNDRNRVGGNANFAKDWRLYALIDCLFCP AWPSSALFHFRNVLETIRATARVDLPALPPLLYTSPAQLKFERDSEGCTF LDAQPLVPAVVKTEPLPDEHHQLVNIEYKPTVTQLENAASHYLERATAES VIQRSPLTPANHILPEAEDAPYGGHTNGGQTDAERSASKRRRGRRSILPH SGKITMAIVEALRKENSLLEQQNDACLQSLVRKEKQFLDMKHNFLAYMER QEAVLALIKQTTIKLEP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14301-PA | 310 | GF14301-PA | 1..308 | 1..314 | 816 | 55.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24281-PA | 320 | GG24281-PA | 1..316 | 1..317 | 1139 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10813-PA | 317 | GH10813-PA | 13..317 | 3..313 | 506 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14005-PA | 317 | CG14005-PA | 1..317 | 1..317 | 1651 | 100 | Plus |
CG14005-PB | 315 | CG14005-PB | 1..315 | 1..317 | 1627 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17322-PA | 315 | GI17322-PA | 14..315 | 3..314 | 578 | 41.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15399-PA | 298 | GL15399-PA | 1..294 | 15..314 | 559 | 40.8 | Plus |
Dper\GL19115-PA | 240 | GL19115-PA | 1..72 | 1..72 | 297 | 72.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12692-PA | 312 | GA12692-PA | 1..308 | 1..314 | 630 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17996-PA | 314 | GM17996-PA | 1..314 | 1..317 | 1453 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22630-PA | 317 | GD22630-PA | 1..316 | 1..316 | 1490 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15908-PA | 316 | GJ15908-PA | 14..316 | 3..314 | 579 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15416-PA | 295 | GK15416-PA | 4..294 | 5..313 | 540 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18977-PA | 320 | GE18977-PA | 1..316 | 1..317 | 1199 | 74.8 | Plus |