BDGP Sequence Production Resources |
Search the DGRC for LD40450
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 404 |
Well: | 50 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11309-RA |
Protein status: | LD40450.pep: gold |
Preliminary Size: | 1712 |
Sequenced Size: | 1633 |
Gene | Date | Evidence |
---|---|---|
CG11309 | 2001-01-01 | Release 2 assignment |
CG11309 | 2001-11-29 | Blastp of sequenced clone |
CG11309 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11309 | 2008-04-29 | Release 5.5 accounting |
CG11309 | 2008-08-15 | Release 5.9 accounting |
CG11309 | 2008-12-18 | 5.12 accounting |
1633 bp (1633 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069637
> LD40450.complete CGATGCTTTCACCTGTTTGTTGGGCGCATTGGTAATAAAATTATTCGAAT GAAATCAATTCTGTATTAATTAGGAGGGAGCACAAGTATATTAAACAAAT TGCAAAAAAATCTGTGACACAAAGACAACGTCGTTACTGATAAGGGCCGA AATCGGCTAAACTTTGGAATTGGTGCTCATTCGCTTTTTGGCCACTTTCG AGCGCAGAAATGGACACGGACGACAACTCAAGTGGCACTATTACCGGCAG TGATCTTGGCCAGCGTTATCGGCATGCAGGCGACTTAACTGGCGAAGCCC CAACCAGACCCCGTGCAAACATATGGTGCTCTAAAAAATACTTCGCCGAG ATCAGCATTACGGTTCCATGGGGGCACATATCCGGCAAGTGGTACGGTCC GCAGAACGTCCAACCAATTTTAGGACTGCACGGGTGGCAGGATAATGCGG GAACCTTTGATCGCCTGATGCCGCTGCTGTCGCCGGACGTGGCATTCCTC GCGATCGATCTTCCTGGTCACGGGCTATCGTCCCGACTGCCTGATGGCTG CTACTACAACTCCGTGGATAATCTGTATGTGATCCGCCTGATCATGAAGC AGTACAAGTGGGAGAAAGTGTCCCTGGTTGGACACTCAATGTCGTCCATT ATTTGCTTTGTTTTCGCCGCGGTCTTTCCGGACAAGGTGGACATGATCAT TGGGATTGATGCCCTGAAACCTCATCAGCGTCCGTATCCGTCGGTTATTA GGACCATGGAAACCCGTTTGGACGAGTTCTTGCGTGAAGACGAAAGGAAC CGGAGTAAGAACGAGCCGCCGAGCTACACCTACGATGAACTTATTGAGAG GGTCTATATCGGCACCTTCCATTCGGTGAACAAGGAGCACTGCAAGCATT TAATGGCTCGCAACATCGGCAAGTCGGAGAAGTACCCGGACAAGTACTTC TTCTGCCGCGATAGGCGTCTCAAGTTTTACAACTATGCCATCGGGTCCCA GGAGCTGTGTGTGGAAATGGCCAATCGGATTACATGTCCTTACTTGTTCA TCAAGGCCGCCCAGTCCTCGTATTTCGAGGACAAGAAGTACTACGACGAG GTGCTGGATGTGCTGTTGAAGAAGCCGAACTTTGAGTACCTGGAGGTTAA TGGCTCGCACCATGTGCACATGAACGATCCAGAGGCCATCATTGCACCGG TCAACAACTTTATCCAGCGCTTCGGACCGGCGGCAGCGGCTGCATCCCGC CAGAAGGCCAAGGAGGCGAAGGAGAGCAAGCTTTAGGCCAACGGTGTGGT AAATAGAGCTTATTTATTGTAGTACAGATTGTACAGGTTTTTATACTTAA TTGTTTATGCTATGTGATCGCGGCAGAGGACTCGGCTCTGCTATAAATAC ACAATGTACATAAGCCGAGGGGTTTTTCGACTGCGCTTAATGGGGAAGTC GTGAAGGATACCAAGAAACTGGTTATGTACAAGCTTAACCCTTTTGTATT GCGCCCAAATTGTATATTTCAAAACTTTATAATTTATTTCAGCTCGAGCA TCAATAATTTCGCTTTTTTGAATTGATATATAAAGAAGAGCTTACCATTT TATTATCGTTTAAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11309-RA | 1730 | CG11309-RA | 45..1660 | 1..1616 | 8080 | 100 | Plus |
CG11309.a | 1632 | CG11309.a | 76..1562 | 130..1616 | 7435 | 100 | Plus |
CG11309-RB | 1767 | CG11309-RB | 403..1678 | 341..1616 | 6380 | 100 | Plus |
CG11309-RB | 1767 | CG11309-RB | 93..403 | 1..311 | 1555 | 100 | Plus |
CG11309.a | 1632 | CG11309.a | 45..77 | 1..33 | 165 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21291284..21292557 | 1615..342 | 6370 | 100 | Minus |
chr3L | 24539361 | chr3L | 21292918..21293099 | 311..130 | 910 | 100 | Minus |
chr3L | 24539361 | chr3L | 21293296..21293426 | 131..1 | 655 | 100 | Minus |
chr3L | 24539361 | chr3L | 21294096..21294206 | 351..461 | 210 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21302275..21303549 | 1616..342 | 6375 | 100 | Minus |
3L | 28110227 | 3L | 21303910..21304091 | 311..130 | 910 | 100 | Minus |
3L | 28110227 | 3L | 21304288..21304418 | 131..1 | 655 | 100 | Minus |
3L | 28110227 | 3L | 21305088..21305198 | 351..461 | 210 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21295375..21296649 | 1616..342 | 6375 | 100 | Minus |
3L | 28103327 | 3L | 21297010..21297191 | 311..130 | 910 | 100 | Minus |
3L | 28103327 | 3L | 21297388..21297518 | 131..1 | 655 | 100 | Minus |
3L | 28103327 | 3L | 21298188..21298298 | 351..461 | 210 | 79.2 | Plus |
3L | 28103327 | 3L | 21296908..21296937 | 341..312 | 150 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21291284..21292557 | 342..1615 | 100 | <- | Minus |
chr3L | 21292816..21292845 | 312..341 | 100 | <- | Minus |
chr3L | 21292918..21293099 | 130..311 | 100 | <- | Minus |
chr3L | 21293298..21293426 | 1..129 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11309-RA | 1..1077 | 210..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11309-RA | 1..1077 | 210..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11309-RA | 1..1077 | 210..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11309-RA | 1..1077 | 210..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11309-RA | 1..1077 | 210..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11309-RA | 45..1659 | 1..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11309-RA | 45..1659 | 1..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11309-RA | 50..1664 | 1..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11309-RA | 45..1659 | 1..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11309-RA | 50..1664 | 1..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21302276..21303549 | 342..1615 | 100 | <- | Minus |
3L | 21303808..21303837 | 312..341 | 100 | <- | Minus |
3L | 21303910..21304091 | 130..311 | 100 | <- | Minus |
3L | 21304290..21304418 | 1..129 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21302276..21303549 | 342..1615 | 100 | <- | Minus |
3L | 21303808..21303837 | 312..341 | 100 | <- | Minus |
3L | 21303910..21304091 | 130..311 | 100 | <- | Minus |
3L | 21304290..21304418 | 1..129 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21302276..21303549 | 342..1615 | 100 | <- | Minus |
3L | 21303808..21303837 | 312..341 | 100 | <- | Minus |
3L | 21303910..21304091 | 130..311 | 100 | <- | Minus |
3L | 21304290..21304418 | 1..129 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21295376..21296649 | 342..1615 | 100 | <- | Minus |
arm_3L | 21296908..21296937 | 312..341 | 100 | <- | Minus |
arm_3L | 21297010..21297191 | 130..311 | 100 | <- | Minus |
arm_3L | 21297390..21297518 | 1..129 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21295376..21296649 | 342..1615 | 100 | <- | Minus |
3L | 21296908..21296937 | 312..341 | 100 | <- | Minus |
3L | 21297010..21297191 | 130..311 | 100 | <- | Minus |
3L | 21297390..21297518 | 1..129 | 100 | Minus |
Translation from 209 to 1285
> LD40450.hyp MDTDDNSSGTITGSDLGQRYRHAGDLTGEAPTRPRANIWCSKKYFAEISI TVPWGHISGKWYGPQNVQPILGLHGWQDNAGTFDRLMPLLSPDVAFLAID LPGHGLSSRLPDGCYYNSVDNLYVIRLIMKQYKWEKVSLVGHSMSSIICF VFAAVFPDKVDMIIGIDALKPHQRPYPSVIRTMETRLDEFLREDERNRSK NEPPSYTYDELIERVYIGTFHSVNKEHCKHLMARNIGKSEKYPDKYFFCR DRRLKFYNYAIGSQELCVEMANRITCPYLFIKAAQSSYFEDKKYYDEVLD VLLKKPNFEYLEVNGSHHVHMNDPEAIIAPVNNFIQRFGPAAAAASRQKA KEAKESKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11309-PA | 358 | CG11309-PA | 1..358 | 1..358 | 1924 | 100 | Plus |
CG11309-PF | 348 | CG11309-PF | 1..348 | 1..358 | 1843 | 97.2 | Plus |
CG11309-PE | 348 | CG11309-PE | 1..348 | 1..358 | 1843 | 97.2 | Plus |
CG11309-PD | 348 | CG11309-PD | 1..348 | 1..358 | 1843 | 97.2 | Plus |
CG11309-PC | 348 | CG11309-PC | 1..348 | 1..358 | 1843 | 97.2 | Plus |
Translation from 209 to 1285
> LD40450.pep MDTDDNSSGTITGSDLGQRYRHAGDLTGEAPTRPRANIWCSKKYFAEISI TVPWGHISGKWYGPQNVQPILGLHGWQDNAGTFDRLMPLLSPDVAFLAID LPGHGLSSRLPDGCYYNSVDNLYVIRLIMKQYKWEKVSLVGHSMSSIICF VFAAVFPDKVDMIIGIDALKPHQRPYPSVIRTMETRLDEFLREDERNRSK NEPPSYTYDELIERVYIGTFHSVNKEHCKHLMARNIGKSEKYPDKYFFCR DRRLKFYNYAIGSQELCVEMANRITCPYLFIKAAQSSYFEDKKYYDEVLD VLLKKPNFEYLEVNGSHHVHMNDPEAIIAPVNNFIQRFGPAAAAASRQKA KEAKESKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24201-PA | 348 | GF24201-PA | 1..348 | 1..358 | 1757 | 91.3 | Plus |
Dana\GF10275-PA | 330 | GF10275-PA | 32..329 | 43..340 | 867 | 52.7 | Plus |
Dana\GF24930-PA | 362 | GF24930-PA | 21..332 | 47..356 | 717 | 43.6 | Plus |
Dana\GF24931-PA | 315 | GF24931-PA | 1..312 | 40..351 | 622 | 42.5 | Plus |
Dana\GF24932-PA | 342 | GF24932-PA | 4..321 | 40..356 | 608 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13244-PA | 349 | GG13244-PA | 1..349 | 1..358 | 1819 | 93.9 | Plus |
Dere\GG16172-PA | 330 | GG16172-PA | 19..329 | 27..340 | 886 | 51.6 | Plus |
Dere\GG14529-PA | 357 | GG14529-PA | 21..340 | 47..358 | 666 | 42.2 | Plus |
Dere\GG14531-PA | 335 | GG14531-PA | 9..320 | 45..357 | 640 | 41.1 | Plus |
Dere\GG14532-PA | 344 | GG14532-PA | 9..322 | 45..356 | 620 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16159-PA | 359 | GH16159-PA | 8..359 | 2..358 | 1576 | 83.7 | Plus |
Dgri\GH16485-PA | 353 | GH16485-PA | 22..332 | 47..355 | 696 | 42.8 | Plus |
Dgri\GH16488-PA | 343 | GH16488-PA | 9..322 | 45..357 | 628 | 39.8 | Plus |
Dgri\GH23210-PA | 318 | GH23210-PA | 9..317 | 45..352 | 563 | 38.9 | Plus |
Dgri\GH16489-PA | 318 | GH16489-PA | 9..317 | 45..352 | 563 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11309-PA | 358 | CG11309-PA | 1..358 | 1..358 | 1924 | 100 | Plus |
CG11309-PF | 348 | CG11309-PF | 1..348 | 1..358 | 1843 | 97.2 | Plus |
CG11309-PE | 348 | CG11309-PE | 1..348 | 1..358 | 1843 | 97.2 | Plus |
CG11309-PD | 348 | CG11309-PD | 1..348 | 1..358 | 1843 | 97.2 | Plus |
CG11309-PC | 348 | CG11309-PC | 1..348 | 1..358 | 1843 | 97.2 | Plus |
CG11309-PB | 348 | CG11309-PB | 1..348 | 1..358 | 1843 | 97.2 | Plus |
CG7632-PA | 330 | CG7632-PA | 19..329 | 27..340 | 864 | 50.6 | Plus |
CG7632-PB | 312 | CG7632-PB | 16..311 | 45..340 | 854 | 52.4 | Plus |
CG5707-PC | 361 | CG5707-PC | 13..320 | 35..340 | 731 | 44.5 | Plus |
CG5707-PB | 361 | CG5707-PB | 13..320 | 35..340 | 731 | 44.5 | Plus |
CG5707-PA | 357 | CG5707-PA | 21..316 | 47..340 | 726 | 45.3 | Plus |
CG5704-PB | 335 | CG5704-PB | 9..320 | 45..357 | 663 | 43.1 | Plus |
CG5704-PA | 335 | CG5704-PA | 9..320 | 45..357 | 663 | 43.1 | Plus |
CG15879-PA | 342 | CG15879-PA | 6..316 | 45..352 | 619 | 41.2 | Plus |
CG15820-PA | 308 | CG15820-PA | 7..302 | 45..340 | 595 | 41.9 | Plus |
kraken-PB | 331 | CG3943-PB | 41..329 | 47..336 | 495 | 37.3 | Plus |
kraken-PA | 331 | CG3943-PA | 41..329 | 47..336 | 495 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13311-PA | 352 | GI13311-PA | 7..352 | 5..358 | 1541 | 83.1 | Plus |
Dmoj\GI12011-PA | 336 | GI12011-PA | 38..335 | 43..340 | 895 | 53.7 | Plus |
Dmoj\GI12158-PA | 395 | GI12158-PA | 60..355 | 47..340 | 709 | 45.3 | Plus |
Dmoj\GI12160-PA | 342 | GI12160-PA | 9..305 | 45..340 | 656 | 43 | Plus |
Dmoj\GI12161-PA | 343 | GI12161-PA | 9..331 | 45..356 | 599 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24589-PA | 348 | GL24589-PA | 1..348 | 1..358 | 1715 | 89.9 | Plus |
Dper\GL24680-PA | 330 | GL24680-PA | 32..329 | 43..340 | 856 | 52.3 | Plus |
Dper\GL24627-PA | 331 | GL24627-PA | 9..325 | 45..358 | 659 | 41.6 | Plus |
Dper\GL24626-PA | 348 | GL24626-PA | 9..329 | 45..357 | 643 | 42.5 | Plus |
Dper\GL19501-PA | 186 | GL19501-PA | 1..184 | 151..336 | 225 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10906-PA | 348 | GA10906-PA | 1..348 | 1..358 | 1715 | 89.9 | Plus |
Dpse\GA20494-PA | 330 | GA20494-PA | 17..329 | 21..340 | 855 | 50.6 | Plus |
Dpse\GA19073-PA | 365 | GA19073-PA | 28..323 | 47..340 | 714 | 46 | Plus |
Dpse\GA23367-PA | 348 | GA23367-PA | 9..329 | 45..357 | 659 | 43.4 | Plus |
Dpse\GA23368-PA | 332 | GA23368-PA | 9..305 | 45..340 | 648 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26924-PA | 355 | GM22149-PA | 1..355 | 1..358 | 1812 | 95.3 | Plus |
Dsec\GM22356-PA | 329 | GM22356-PA | 21..328 | 30..340 | 868 | 51.1 | Plus |
Dsec\GM14139-PA | 345 | GM14139-PA | 9..319 | 45..352 | 619 | 41 | Plus |
Dsec\GM14136-PA | 308 | GM14136-PA | 7..306 | 45..344 | 596 | 41.3 | Plus |
Dsec\GM14138-PA | 293 | GM14138-PA | 9..270 | 45..308 | 594 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12125-PA | 360 | GD12125-PA | 1..360 | 1..358 | 1897 | 97.8 | Plus |
Dsim\GD14950-PA | 330 | GD14950-PA | 19..329 | 27..340 | 867 | 50.3 | Plus |
Dsim\GD13405-PA | 357 | GD13405-PA | 21..316 | 47..340 | 669 | 44 | Plus |
Dsim\GD13408-PA | 335 | GD13408-PA | 9..320 | 45..357 | 668 | 43 | Plus |
Dsim\GD13410-PA | 345 | GD13410-PA | 9..319 | 45..352 | 627 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12081-PA | 357 | GJ12081-PA | 24..357 | 15..358 | 1586 | 88.1 | Plus |
Dvir\GJ13282-PA | 336 | GJ13282-PA | 38..335 | 43..340 | 889 | 54 | Plus |
Dvir\GJ13437-PA | 357 | GJ13437-PA | 22..317 | 47..340 | 701 | 44.6 | Plus |
Dvir\GJ11632-PA | 343 | GJ11632-PA | 9..321 | 45..356 | 644 | 40.5 | Plus |
Dvir\GJ13440-PA | 343 | GJ13440-PA | 9..321 | 45..356 | 640 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20424-PA | 352 | GK20424-PA | 18..333 | 15..340 | 1581 | 89.3 | Plus |
Dwil\GK20467-PA | 335 | GK20467-PA | 37..334 | 43..340 | 845 | 51.3 | Plus |
Dwil\GK12598-PA | 358 | GK12598-PA | 20..315 | 47..340 | 681 | 45.6 | Plus |
Dwil\GK12602-PA | 346 | GK12602-PA | 9..311 | 45..345 | 669 | 43.9 | Plus |
Dwil\GK24439-PA | 338 | GK24439-PA | 42..335 | 45..335 | 543 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22964-PA | 348 | GE22964-PA | 1..348 | 1..358 | 1846 | 95.5 | Plus |
Dyak\GE19742-PA | 330 | GE19742-PA | 19..329 | 27..340 | 885 | 51.9 | Plus |
Dyak\GE23049-PA | 330 | GE23049-PA | 19..329 | 27..340 | 885 | 51.9 | Plus |
Dyak\GE20878-PA | 357 | GE20878-PA | 21..316 | 47..340 | 669 | 44 | Plus |
Dyak\GE20883-PA | 335 | GE20883-PA | 9..320 | 45..357 | 635 | 42.1 | Plus |